RNA–Protein interactions for RNA: ENST00000588269.1

PRKCSH-207, Transcript of protein kinase C substrate 80K-H, humanhuman

TSL 5

Gene PRKCSH, Length 557 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCSH-207ENST00000588269 TROAPQ12815 778 aa13.61□□□□□ -0.23
PRKCSH-207ENST00000588269 BAATQ14032 418 aaPredicted RBP13.61□□□□□ -0.23
PRKCSH-207ENST00000588269 NOL8Q76FK4 1167 aaKnown RBP13.61□□□□□ -0.23
PRKCSH-207ENST00000588269 CHST3Q7LGC8 479 aa13.61□□□□□ -0.23
PRKCSH-207ENST00000588269 ZNF654Q8IZM8 581 aa13.61□□□□□ -0.23
PRKCSH-207ENST00000588269 SAMD3Q8N6K7 520 aa13.61□□□□□ -0.23
PRKCSH-207ENST00000588269 PCSK9Q8NBP7 692 aaKnown RBP13.61□□□□□ -0.23
PRKCSH-207ENST00000588269 NEK1Q96PY6 1258 aa13.61□□□□□ -0.23
PRKCSH-207ENST00000588269 LY9Q9HBG7 655 aa13.61□□□□□ -0.23
PRKCSH-207ENST00000588269 PRKAG2Q9UGJ0 569 aa13.61□□□□□ -0.23
PRKCSH-207ENST00000588269 MAD2L2Q9UI95 211 aa13.61□□□□□ -0.23
PRKCSH-207ENST00000588269 MOXD2PA6NHM9 499 aa13.6□□□□□ -0.23
PRKCSH-207ENST00000588269 ZEB2O60315 1214 aa13.6□□□□□ -0.23
PRKCSH-207ENST00000588269 SNAI1O95863 264 aaPredicted RBP13.6□□□□□ -0.23
PRKCSH-207ENST00000588269 PSMA5P28066 241 aa13.6□□□□□ -0.23
PRKCSH-207ENST00000588269 ALDH5A1P51649 535 aaPredicted RBP13.6□□□□□ -0.23
PRKCSH-207ENST00000588269 ANTXR2P58335 489 aa13.6□□□□□ -0.23
PRKCSH-207ENST00000588269 RPS6P62753 249 aaKnown RBP13.6□□□□□ -0.23
PRKCSH-207ENST00000588269 PDE4DQ08499 809 aa13.6□□□□□ -0.23
PRKCSH-207ENST00000588269 LRRC41Q15345 812 aa13.6□□□□□ -0.23
PRKCSH-207ENST00000588269 C9orf50Q5SZB4 431 aa13.6□□□□□ -0.23
PRKCSH-207ENST00000588269 GPR153Q6NV75 609 aa13.6□□□□□ -0.23
PRKCSH-207ENST00000588269 SLC30A10Q6XR72 485 aa13.6□□□□□ -0.23
PRKCSH-207ENST00000588269 SH3RF1Q7Z6J0 888 aa13.6□□□□□ -0.23
PRKCSH-207ENST00000588269 HOMER1Q86YM7 354 aa13.6□□□□□ -0.23
PRKCSH-207ENST00000588269 IGDCC4Q8TDY8 1250 aa13.6□□□□□ -0.23
PRKCSH-207ENST00000588269 FERMT2Q96AC1 680 aa13.6□□□□□ -0.23
PRKCSH-207ENST00000588269 RRP36Q96EU6 259 aaKnown RBP13.6□□□□□ -0.23
PRKCSH-207ENST00000588269 TSEN34Q9BSV6 310 aaKnown RBP13.6□□□□□ -0.23
PRKCSH-207ENST00000588269 JMJD4Q9H9V9 463 aa13.6□□□□□ -0.23
PRKCSH-207ENST00000588269 VAT1LQ9HCJ6 419 aa13.6□□□□□ -0.23
PRKCSH-207ENST00000588269 PRDM5Q9NQX1 630 aaPredicted RBP13.6□□□□□ -0.23
PRKCSH-207ENST00000588269 MAP3K20Q9NYL2 800 aaKnown RBP13.6□□□□□ -0.23
PRKCSH-207ENST00000588269 TAF6LQ9Y6J9 622 aa13.6□□□□□ -0.23
PRKCSH-207ENST00000588269 SYNRGQ9UMZ2 1314 aa13.6□□□□□ -0.23
PRKCSH-207ENST00000588269 CST5P28325 142 aaPredicted RBP13.59□□□□□ -0.23
PRKCSH-207ENST00000588269 SMARCA1P28370 1054 aa13.59□□□□□ -0.23
PRKCSH-207ENST00000588269 SHHQ15465 462 aa13.59□□□□□ -0.23
PRKCSH-207ENST00000588269 CCDC144BQ3MJ40 725 aa13.59□□□□□ -0.23
PRKCSH-207ENST00000588269 TSGA10IPQ3SY00 556 aa13.59□□□□□ -0.23
PRKCSH-207ENST00000588269 TRIM60Q495X7 471 aa13.59□□□□□ -0.23
PRKCSH-207ENST00000588269 BRDTQ58F21 947 aaPredicted RBP13.59□□□□□ -0.23
PRKCSH-207ENST00000588269 STAG2Q8N3U4 1231 aa13.59□□□□□ -0.23
PRKCSH-207ENST00000588269 CLEC4DQ8WXI8 215 aa13.59□□□□□ -0.23
PRKCSH-207ENST00000588269 LENG1Q96BZ8 264 aaPredicted RBP13.59□□□□□ -0.23
PRKCSH-207ENST00000588269 FGD4Q96M96 766 aa13.59□□□□□ -0.23
PRKCSH-207ENST00000588269 LBHD1Q9BQE6 289 aaPredicted RBP13.59□□□□□ -0.23
PRKCSH-207ENST00000588269 SPZ1Q9BXG8 430 aa13.59□□□□□ -0.23
PRKCSH-207ENST00000588269 AP5M1Q9H0R1 490 aa13.59□□□□□ -0.23
PRKCSH-207ENST00000588269 CPVLQ9H3G5 476 aa13.59□□□□□ -0.23
PRKCSH-207ENST00000588269 RBM28Q9NW13 759 aaKnown RBP13.59□□□□□ -0.23
PRKCSH-207ENST00000588269 PCDHA1Q9Y5I3 950 aa13.59□□□□□ -0.23
PRKCSH-207ENST00000588269 SMCHD1A6NHR9 2005 aa13.59□□□□□ -0.23
PRKCSH-207ENST00000588269 PNMA6FA0A0J9YX94 578 aa13.58□□□□□ -0.24
PRKCSH-207ENST00000588269 SOWAHBA6NEL2 793 aa13.58□□□□□ -0.24
PRKCSH-207ENST00000588269 PGK1P00558 417 aa13.58□□□□□ -0.24
PRKCSH-207ENST00000588269 C6orf222P0C671 652 aaPredicted RBP13.58□□□□□ -0.24
PRKCSH-207ENST00000588269 TAL1P17542 331 aaPredicted RBP13.58□□□□□ -0.24
PRKCSH-207ENST00000588269 RCAN1P53805 252 aa13.58□□□□□ -0.24
PRKCSH-207ENST00000588269 TNFAIP2Q03169 654 aa13.58□□□□□ -0.24
PRKCSH-207ENST00000588269 DHX32Q7L7V1 743 aaKnown RBP13.58□□□□□ -0.24
PRKCSH-207ENST00000588269 SGMS1Q86VZ5 419 aa13.58□□□□□ -0.24
PRKCSH-207ENST00000588269 MICU3Q86XE3 530 aa13.58□□□□□ -0.24
PRKCSH-207ENST00000588269 FBXO16Q8IX29 292 aaPredicted RBP13.58□□□□□ -0.24
PRKCSH-207ENST00000588269 MORC4Q8TE76 937 aa13.58□□□□□ -0.24
PRKCSH-207ENST00000588269 NSUN6Q8TEA1 469 aaKnown RBP13.58□□□□□ -0.24
PRKCSH-207ENST00000588269 BADQ92934 168 aa13.58□□□□□ -0.24
PRKCSH-207ENST00000588269 GLT1D1Q96MS3 346 aa13.58□□□□□ -0.24
PRKCSH-207ENST00000588269 COL25A1Q9BXS0 654 aaPredicted RBP13.58□□□□□ -0.24
PRKCSH-207ENST00000588269 RIOX1Q9H6W3 641 aa13.58□□□□□ -0.24
PRKCSH-207ENST00000588269 PHF24Q9UPV7 400 aa13.58□□□□□ -0.24
PRKCSH-207ENST00000588269 LRRC37A2A6NM11 1700 aa13.58□□□□□ -0.24
PRKCSH-207ENST00000588269 MYH6P13533 1939 aa13.57□□□□□ -0.24
PRKCSH-207ENST00000588269 NKRFO15226 690 aaKnown RBP eCLIP13.57□□□□□ -0.24
PRKCSH-207ENST00000588269 CFBP00751 764 aa13.57□□□□□ -0.24
PRKCSH-207ENST00000588269 HSPA4P34932 840 aa13.57□□□□□ -0.24
PRKCSH-207ENST00000588269 ADCYAP1R1P41586 468 aa13.57□□□□□ -0.24
PRKCSH-207ENST00000588269 PPP2R5BQ15173 497 aa13.57□□□□□ -0.24
PRKCSH-207ENST00000588269 IQSEC1Q6DN90 963 aa13.57□□□□□ -0.24
PRKCSH-207ENST00000588269 BLOC1S2Q6QNY1 142 aa13.57□□□□□ -0.24
PRKCSH-207ENST00000588269 SLC39A5Q6ZMH5 540 aa13.57□□□□□ -0.24
PRKCSH-207ENST00000588269 TLK2Q86UE8 772 aa13.57□□□□□ -0.24
PRKCSH-207ENST00000588269 SCFD2Q8WU76 684 aa13.57□□□□□ -0.24
PRKCSH-207ENST00000588269 MTMR8Q96EF0 704 aa13.57□□□□□ -0.24
PRKCSH-207ENST00000588269 IWS1Q96ST2 819 aa13.57□□□□□ -0.24
PRKCSH-207ENST00000588269 UPF3AQ9H1J1 476 aaKnown RBP13.57□□□□□ -0.24
PRKCSH-207ENST00000588269 Q9Y3F1 56 aa13.57□□□□□ -0.24
PRKCSH-207ENST00000588269 MROH7Q68CQ1 1323 aa13.57□□□□□ -0.24
PRKCSH-207ENST00000588269 CCDC196A0A1B0GTZ2 297 aa13.56□□□□□ -0.24
PRKCSH-207ENST00000588269 TRIM43BA6NCK2 446 aa13.56□□□□□ -0.24
PRKCSH-207ENST00000588269 ZBTB43O43298 467 aa13.56□□□□□ -0.24
PRKCSH-207ENST00000588269 ADAMTS4O75173 837 aa13.56□□□□□ -0.24
PRKCSH-207ENST00000588269 CABYRO75952 493 aa13.56□□□□□ -0.24
PRKCSH-207ENST00000588269 ITGB8P26012 769 aa13.56□□□□□ -0.24
PRKCSH-207ENST00000588269 GJA9P57773 515 aa13.56□□□□□ -0.24
PRKCSH-207ENST00000588269 C1orf53Q5VUE5 145 aa13.56□□□□□ -0.24
PRKCSH-207ENST00000588269 ARHGEF16Q5VV41 709 aa13.56□□□□□ -0.24
PRKCSH-207ENST00000588269 EEPD1Q7L9B9 569 aa13.56□□□□□ -0.24
PRKCSH-207ENST00000588269 CUL5Q93034 780 aa13.56□□□□□ -0.24
PRKCSH-207ENST00000588269 TRIM43Q96BQ3 446 aaPredicted RBP13.56□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms