RNA–Protein interactions for RNA: ENST00000587338.1

SDF2-204, Transcript of stromal cell derived factor 2, humanhuman

TSL 3

Gene SDF2, Length 583 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF2-204ENST00000587338 RETREG2Q8NC44 543 aa10.19□□□□□ -0.78
SDF2-204ENST00000587338 GMCL1P1Q8NEA9 526 aa10.19□□□□□ -0.78
SDF2-204ENST00000587338 PPP1R13LQ8WUF5 828 aa10.19□□□□□ -0.78
SDF2-204ENST00000587338 CEP95Q96GE4 821 aa10.19□□□□□ -0.78
SDF2-204ENST00000587338 VTA1Q9NP79 307 aa10.19□□□□□ -0.78
SDF2-204ENST00000587338 GPHNQ9NQX3 736 aaPredicted RBP10.19□□□□□ -0.78
SDF2-204ENST00000587338 POLR3EQ9NVU0 708 aa10.19□□□□□ -0.78
SDF2-204ENST00000587338 Q9Y3F1 56 aa10.19□□□□□ -0.78
SDF2-204ENST00000587338 MYH4Q9Y623 1939 aa10.19□□□□□ -0.78
SDF2-204ENST00000587338 LCHNA4D1U4 455 aa10.18□□□□□ -0.78
SDF2-204ENST00000587338 TTLL1O95922 423 aa10.18□□□□□ -0.78
SDF2-204ENST00000587338 FDX1P10109 184 aa10.18□□□□□ -0.78
SDF2-204ENST00000587338 MRE11P49959 708 aa10.18□□□□□ -0.78
SDF2-204ENST00000587338 SNAP25P60880 206 aa10.18□□□□□ -0.78
SDF2-204ENST00000587338 PURAQ00577 322 aaKnown RBP10.18□□□□□ -0.78
SDF2-204ENST00000587338 CSPP1Q1MSJ5 1256 aa10.18□□□□□ -0.78
SDF2-204ENST00000587338 TKFCQ3LXA3 575 aa10.18□□□□□ -0.78
SDF2-204ENST00000587338 SBK1Q52WX2 424 aa10.18□□□□□ -0.78
SDF2-204ENST00000587338 ZSCAN25Q6NSZ9 544 aa10.18□□□□□ -0.78
SDF2-204ENST00000587338 NSMFQ6X4W1 530 aa10.18□□□□□ -0.78
SDF2-204ENST00000587338 TMCO2Q7Z6W1 182 aaPredicted RBP10.18□□□□□ -0.78
SDF2-204ENST00000587338 GJD3Q8N144 294 aa10.18□□□□□ -0.78
SDF2-204ENST00000587338 TRERF1Q96PN7 1200 aa10.18□□□□□ -0.78
SDF2-204ENST00000587338 HAUS7Q99871 368 aa10.18□□□□□ -0.78
SDF2-204ENST00000587338 ZBED2Q9BTP6 218 aa10.18□□□□□ -0.78
SDF2-204ENST00000587338 UBE2ZQ9H832 354 aaPredicted RBP10.18□□□□□ -0.78
SDF2-204ENST00000587338 MTMR4Q9NYA4 1195 aa10.18□□□□□ -0.78
SDF2-204ENST00000587338 CYP39A1Q9NYL5 469 aa10.18□□□□□ -0.78
SDF2-204ENST00000587338 MTUS1Q9ULD2 1270 aa10.18□□□□□ -0.78
SDF2-204ENST00000587338 NOD1Q9Y239 953 aa10.18□□□□□ -0.78
SDF2-204ENST00000587338 ZNF536O15090 1300 aa10.17□□□□□ -0.78
SDF2-204ENST00000587338 GSG1L2A8MUP6 293 aa10.17□□□□□ -0.78
SDF2-204ENST00000587338 PITPNM1O00562 1244 aa10.17□□□□□ -0.78
SDF2-204ENST00000587338 BAIAP3O94812 1187 aa10.17□□□□□ -0.78
SDF2-204ENST00000587338 IQCF3P0C7M6 154 aa10.17□□□□□ -0.78
SDF2-204ENST00000587338 ATP5JP18859 108 aa10.17□□□□□ -0.78
SDF2-204ENST00000587338 KCNA5P22460 613 aa10.17□□□□□ -0.78
SDF2-204ENST00000587338 TDO2P48775 406 aa10.17□□□□□ -0.78
SDF2-204ENST00000587338 CPT1AP50416 773 aa10.17□□□□□ -0.78
SDF2-204ENST00000587338 CHMP4BP1P59074 171 aa10.17□□□□□ -0.78
SDF2-204ENST00000587338 NBPF20Q3BBV1 942 aa10.17□□□□□ -0.78
SDF2-204ENST00000587338 DUSP28Q4G0W2 176 aa10.17□□□□□ -0.78
SDF2-204ENST00000587338 MUM1L1Q5H9M0 696 aa10.17□□□□□ -0.78
SDF2-204ENST00000587338 FAM160B2Q86V87 743 aa10.17□□□□□ -0.78
SDF2-204ENST00000587338 RPAP2Q8IXW5 612 aaPredicted RBP10.17□□□□□ -0.78
SDF2-204ENST00000587338 ZNF444Q8N0Y2 327 aaPredicted RBP10.17□□□□□ -0.78
SDF2-204ENST00000587338 OR6J1Q8NGC5 347 aa10.17□□□□□ -0.78
SDF2-204ENST00000587338 CHURC1Q8WUH1 139 aa10.17□□□□□ -0.78
SDF2-204ENST00000587338 MKL1Q969V6 931 aa10.17□□□□□ -0.78
SDF2-204ENST00000587338 PURBQ96QR8 312 aaKnown RBP10.17□□□□□ -0.78
SDF2-204ENST00000587338 STRBPQ96SI9 672 aaKnown RBP10.17□□□□□ -0.78
SDF2-204ENST00000587338 MTG1Q9BT17 334 aaPredicted RBP10.17□□□□□ -0.78
SDF2-204ENST00000587338 WDR11Q9BZH6 1224 aa10.17□□□□□ -0.78
SDF2-204ENST00000587338 ZNF287Q9HBT7 754 aa10.17□□□□□ -0.78
SDF2-204ENST00000587338 SYNPO2Q9UMS6 1093 aa10.17□□□□□ -0.78
SDF2-204ENST00000587338 TANC1Q9C0D5 1861 aa10.17□□□□□ -0.78
SDF2-204ENST00000587338 TET1Q8NFU7 2136 aa10.16□□□□□ -0.78
SDF2-204ENST00000587338 MYH7P12883 1935 aa10.16□□□□□ -0.78
SDF2-204ENST00000587338 MCCP23508 829 aa10.16□□□□□ -0.78
SDF2-204ENST00000587338 SLC1A4P43007 532 aa10.16□□□□□ -0.78
SDF2-204ENST00000587338 WDR5P61964 334 aaKnown RBP10.16□□□□□ -0.78
SDF2-204ENST00000587338 NHLH1Q02575 133 aa10.16□□□□□ -0.78
SDF2-204ENST00000587338 BFSP2Q13515 415 aa10.16□□□□□ -0.78
SDF2-204ENST00000587338 BRDTQ58F21 947 aaPredicted RBP10.16□□□□□ -0.78
SDF2-204ENST00000587338 FAM178BQ8IXR5 827 aa10.16□□□□□ -0.78
SDF2-204ENST00000587338 STAG1Q8WVM7 1258 aa10.16□□□□□ -0.78
SDF2-204ENST00000587338 LMCD1Q9NZU5 365 aa10.16□□□□□ -0.78
SDF2-204ENST00000587338 CCPG1Q9ULG6 757 aa10.16□□□□□ -0.78
SDF2-204ENST00000587338 RAD50Q92878 1312 aa10.15□□□□□ -0.78
SDF2-204ENST00000587338 TSPY3P0CV98 308 aa10.15□□□□□ -0.78
SDF2-204ENST00000587338 TSPY8P0CW00 308 aa10.15□□□□□ -0.78
SDF2-204ENST00000587338 ALADP13716 330 aa10.15□□□□□ -0.78
SDF2-204ENST00000587338 IL9P15248 144 aa10.15□□□□□ -0.78
SDF2-204ENST00000587338 ALDH5A1P51649 535 aaPredicted RBP10.15□□□□□ -0.78
SDF2-204ENST00000587338 DEFB103AP81534 67 aa10.15□□□□□ -0.78
SDF2-204ENST00000587338 LEXMQ3ZCV2 418 aa10.15□□□□□ -0.78
SDF2-204ENST00000587338 PTCRAQ6ISU1 281 aaPredicted RBP10.15□□□□□ -0.78
SDF2-204ENST00000587338 NFRKBQ6P4R8 1299 aa10.15□□□□□ -0.78
SDF2-204ENST00000587338 GIMAP6Q6P9H5 292 aa10.15□□□□□ -0.78
SDF2-204ENST00000587338 KCTD1Q719H9 257 aa10.15□□□□□ -0.78
SDF2-204ENST00000587338 MORC4Q8TE76 937 aa10.15□□□□□ -0.78
SDF2-204ENST00000587338 GMCL1Q96IK5 515 aa10.15□□□□□ -0.78
SDF2-204ENST00000587338 EPB41L4AQ9HCS5 686 aaPredicted RBP10.15□□□□□ -0.78
SDF2-204ENST00000587338 SCN10AQ9Y5Y9 1956 aa10.15□□□□□ -0.78
SDF2-204ENST00000587338 PLIN4Q96Q06 1357 aa10.14□□□□□ -0.79
SDF2-204ENST00000587338 CFAP54Q96N23 3096 aa10.14□□□□□ -0.79
SDF2-204ENST00000587338 RAB11FIP3O75154 756 aa10.14□□□□□ -0.79
SDF2-204ENST00000587338 HMMRO75330 724 aa10.14□□□□□ -0.79
SDF2-204ENST00000587338 APPP05067 770 aa10.14□□□□□ -0.79
SDF2-204ENST00000587338 BAATQ14032 418 aaPredicted RBP10.14□□□□□ -0.79
SDF2-204ENST00000587338 PPP2R5BQ15173 497 aa10.14□□□□□ -0.79
SDF2-204ENST00000587338 C20orf194Q5TEA3 1177 aa10.14□□□□□ -0.79
SDF2-204ENST00000587338 RASGRP2Q7LDG7 609 aa10.14□□□□□ -0.79
SDF2-204ENST00000587338 CCDC155Q8N6L0 562 aa10.14□□□□□ -0.79
SDF2-204ENST00000587338 NEDD1Q8NHV4 660 aa10.14□□□□□ -0.79
SDF2-204ENST00000587338 GADD45GIP1Q8TAE8 222 aaPredicted RBP10.14□□□□□ -0.79
SDF2-204ENST00000587338 PANK1Q8TE04 598 aa10.14□□□□□ -0.79
SDF2-204ENST00000587338 FBXL18Q96ME1 805 aa10.14□□□□□ -0.79
SDF2-204ENST00000587338 TGS1Q96RS0 853 aaKnown RBP10.14□□□□□ -0.79
SDF2-204ENST00000587338 CRBNQ96SW2 442 aa10.14□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms