RNA–Protein interactions for RNA: ENST00000586558.5

DDX39A-204, Transcript of DExD-box helicase 39A, humanhuman

TSL 2

Gene DDX39A, Length 1,127 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-204ENST00000586558 SLC9C1Q4G0N8 1177 aa22.08■■□□□ 1.13
DDX39A-204ENST00000586558 FAM177A1Q8N128 213 aaPredicted RBP22.08■■□□□ 1.13
DDX39A-204ENST00000586558 MSL3Q8N5Y2 521 aaKnown RBP22.08■■□□□ 1.13
DDX39A-204ENST00000586558 NPLOC4Q8TAT6 608 aa22.08■■□□□ 1.13
DDX39A-204ENST00000586558 CCDC12Q8WUD4 166 aaPredicted RBP22.08■■□□□ 1.13
DDX39A-204ENST00000586558 GPKOWQ92917 476 aaPredicted RBP eCLIP22.08■■□□□ 1.138e-6■■□□□ 13.6
DDX39A-204ENST00000586558 MAML3Q96JK9 1138 aa22.08■■□□□ 1.13
DDX39A-204ENST00000586558 DOCK3Q8IZD9 2030 aa22.07■■□□□ 1.12
DDX39A-204ENST00000586558 LOC102724159A0A0B4J2E5 919 aa22.07■■□□□ 1.12
DDX39A-204ENST00000586558 STXBP3O00186 592 aa22.07■■□□□ 1.12
DDX39A-204ENST00000586558 CD2BP2O95400 341 aaKnown RBP22.07■■□□□ 1.12
DDX39A-204ENST00000586558 CFBP00751 764 aa22.07■■□□□ 1.12
DDX39A-204ENST00000586558 HMGCRP04035 888 aa22.07■■□□□ 1.12
DDX39A-204ENST00000586558 NAPAP54920 295 aa22.07■■□□□ 1.12
DDX39A-204ENST00000586558 PWP2Q15269 919 aaKnown RBP22.07■■□□□ 1.12
DDX39A-204ENST00000586558 SLC30A10Q6XR72 485 aa22.07■■□□□ 1.12
DDX39A-204ENST00000586558 LLPHQ9BRT6 129 aaKnown RBP22.07■■□□□ 1.12
DDX39A-204ENST00000586558 GLT8D2Q9H1C3 349 aa22.07■■□□□ 1.12
DDX39A-204ENST00000586558 ADD3Q9UEY8 706 aaKnown RBP22.07■■□□□ 1.12
DDX39A-204ENST00000586558 RBBP6Q7Z6E9 1792 aaKnown RBP22.07■■□□□ 1.12
DDX39A-204ENST00000586558 GCOM1H8Y6P7 765 aaPredicted RBP22.06■■□□□ 1.12
DDX39A-204ENST00000586558 CTDNEP1O95476 244 aa22.06■■□□□ 1.12
DDX39A-204ENST00000586558 POLR2MP0CAP2 368 aa22.06■■□□□ 1.12
DDX39A-204ENST00000586558 ELNP15502 786 aa22.06■■□□□ 1.12
DDX39A-204ENST00000586558 CALML3P27482 149 aa22.06■■□□□ 1.12
DDX39A-204ENST00000586558 CNTN2Q02246 1040 aa22.06■■□□□ 1.12
DDX39A-204ENST00000586558 CCL14Q16627 93 aa22.06■■□□□ 1.12
DDX39A-204ENST00000586558 MFSD14CQ5VZR4 134 aa22.06■■□□□ 1.12
DDX39A-204ENST00000586558 CCDC83Q8IWF9 413 aa22.06■■□□□ 1.12
DDX39A-204ENST00000586558 NSUN7Q8NE18 718 aaKnown RBP22.06■■□□□ 1.12
DDX39A-204ENST00000586558 DNERQ8NFT8 737 aa22.06■■□□□ 1.12
DDX39A-204ENST00000586558 TRIB2Q92519 343 aa22.06■■□□□ 1.12
DDX39A-204ENST00000586558 WASF1Q92558 559 aa22.06■■□□□ 1.12
DDX39A-204ENST00000586558 TMX3Q96JJ7 454 aa22.06■■□□□ 1.12
DDX39A-204ENST00000586558 PSTPIP2Q9H939 334 aa22.06■■□□□ 1.12
DDX39A-204ENST00000586558 SH3GLB2Q9NR46 395 aa22.06■■□□□ 1.12
DDX39A-204ENST00000586558 ESYT2A0FGR8 921 aa22.05■■□□□ 1.12
DDX39A-204ENST00000586558 PIK3CDO00329 1044 aa22.05■■□□□ 1.12
DDX39A-204ENST00000586558 PPFIA3O75145 1194 aa22.05■■□□□ 1.12
DDX39A-204ENST00000586558 IGHA2P01877 340 aa22.05■■□□□ 1.12
DDX39A-204ENST00000586558 ST3GAL1Q11201 340 aa22.05■■□□□ 1.12
DDX39A-204ENST00000586558 MAMDC4Q6UXC1 1216 aa22.05■■□□□ 1.12
DDX39A-204ENST00000586558 CCDC148Q8NFR7 591 aa22.05■■□□□ 1.12
DDX39A-204ENST00000586558 SYTL5Q8TDW5 730 aaPredicted RBP22.05■■□□□ 1.12
DDX39A-204ENST00000586558 CUL5Q93034 780 aa22.05■■□□□ 1.12
DDX39A-204ENST00000586558 ARMC5Q96C12 935 aa22.05■■□□□ 1.12
DDX39A-204ENST00000586558 ORC3Q9UBD5 711 aaPredicted RBP22.05■■□□□ 1.12
DDX39A-204ENST00000586558 SMCHD1A6NHR9 2005 aa22.05■■□□□ 1.12
DDX39A-204ENST00000586558 SYNGAP1Q96PV0 1343 aa22.05■■□□□ 1.12
DDX39A-204ENST00000586558 SOWAHBA6NEL2 793 aa22.04■■□□□ 1.12
DDX39A-204ENST00000586558 ASB14A6NK59 587 aa22.04■■□□□ 1.12
DDX39A-204ENST00000586558 MRPL12P52815 198 aaKnown RBP22.04■■□□□ 1.12
DDX39A-204ENST00000586558 TBC1D5Q92609 795 aa22.04■■□□□ 1.12
DDX39A-204ENST00000586558 FGD4Q96M96 766 aa22.04■■□□□ 1.12
DDX39A-204ENST00000586558 MPHOSPH6Q99547 160 aaKnown RBP22.04■■□□□ 1.12
DDX39A-204ENST00000586558 TINF2Q9BSI4 451 aa22.04■■□□□ 1.12
DDX39A-204ENST00000586558 FLRT1Q9NZU1 646 aa22.04■■□□□ 1.12
DDX39A-204ENST00000586558 BIN2Q9UBW5 565 aaPredicted RBP22.04■■□□□ 1.12
DDX39A-204ENST00000586558 B4DLN1 442 aa22.03■■□□□ 1.12
DDX39A-204ENST00000586558 ADCY7P51828 1080 aa22.03■■□□□ 1.12
DDX39A-204ENST00000586558 UBXN2AP68543 259 aa22.03■■□□□ 1.12
DDX39A-204ENST00000586558 TYW1BQ6NUM6 668 aa22.03■■□□□ 1.12
DDX39A-204ENST00000586558 SH3TC2Q8TF17 1288 aa22.03■■□□□ 1.12
DDX39A-204ENST00000586558 RIC8AQ9NPQ8 531 aa22.03■■□□□ 1.12
DDX39A-204ENST00000586558 NRBP1Q9UHY1 535 aa22.03■■□□□ 1.12
DDX39A-204ENST00000586558 INHAP05111 366 aa22.02■■□□□ 1.12
DDX39A-204ENST00000586558 XBP1P17861 261 aa22.02■■□□□ 1.12
DDX39A-204ENST00000586558 HOXA13P31271 388 aaPredicted RBP22.02■■□□□ 1.12
DDX39A-204ENST00000586558 HMGN5P82970 282 aaKnown RBP22.02■■□□□ 1.12
DDX39A-204ENST00000586558 SMARCC2Q8TAQ2 1214 aa22.02■■□□□ 1.12
DDX39A-204ENST00000586558 NSUN6Q8TEA1 469 aaKnown RBP22.02■■□□□ 1.12
DDX39A-204ENST00000586558 SNX21Q969T3 373 aa22.02■■□□□ 1.12
DDX39A-204ENST00000586558 ZMYND12Q9H0C1 365 aa22.02■■□□□ 1.12
DDX39A-204ENST00000586558 C6orf50Q9HD87 102 aa22.02■■□□□ 1.12
DDX39A-204ENST00000586558 COL20A1Q9P218 1284 aa22.02■■□□□ 1.12
DDX39A-204ENST00000586558 ASTN1O14525 1302 aa22.02■■□□□ 1.12
DDX39A-204ENST00000586558 SMCO2A6NFE2 343 aa22.01■■□□□ 1.11
DDX39A-204ENST00000586558 MEIS2O14770 477 aa22.01■■□□□ 1.11
DDX39A-204ENST00000586558 GNA11P29992 359 aa22.01■■□□□ 1.11
DDX39A-204ENST00000586558 ALDH5A1P51649 535 aaPredicted RBP22.01■■□□□ 1.11
DDX39A-204ENST00000586558 MAP3K21Q5TCX8 1036 aa22.01■■□□□ 1.11
DDX39A-204ENST00000586558 MCTP2Q6DN12 878 aa22.01■■□□□ 1.11
DDX39A-204ENST00000586558 MORC4Q8TE76 937 aa22.01■■□□□ 1.11
DDX39A-204ENST00000586558 ZNF333Q96JL9 665 aa22.01■■□□□ 1.11
DDX39A-204ENST00000586558 RMDN3Q96TC7 470 aa22.01■■□□□ 1.11
DDX39A-204ENST00000586558 ZNFX1Q9P2E3 1918 aaKnown RBP22.01■■□□□ 1.11
DDX39A-204ENST00000586558 JAK2O60674 1132 aa22■■□□□ 1.11
DDX39A-204ENST00000586558 PRKAR2AP13861 404 aaKnown RBP22■■□□□ 1.11
DDX39A-204ENST00000586558 FDPSP14324 419 aaKnown RBP22■■□□□ 1.11
DDX39A-204ENST00000586558 CYP2C19P33261 490 aa22■■□□□ 1.11
DDX39A-204ENST00000586558 USP17L6PQ6QN14 398 aa22■■□□□ 1.11
DDX39A-204ENST00000586558 BICD2Q8TD16 824 aa22■■□□□ 1.11
DDX39A-204ENST00000586558 IWS1Q96ST2 819 aa22■■□□□ 1.11
DDX39A-204ENST00000586558 VPS54Q9P1Q0 977 aa22■■□□□ 1.11
DDX39A-204ENST00000586558 CNPY2Q9Y2B0 182 aa22■■□□□ 1.11
DDX39A-204ENST00000586558 PLXNA1Q9UIW2 1896 aa22■■□□□ 1.11
DDX39A-204ENST00000586558 HTTP42858 3142 aa22■■□□□ 1.11
DDX39A-204ENST00000586558 EDNRBP24530 442 aa21.99■■□□□ 1.11
DDX39A-204ENST00000586558 CACNB2Q08289 660 aaPredicted RBP21.99■■□□□ 1.11
DDX39A-204ENST00000586558 GALNT17Q6IS24 598 aa21.99■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms