RNA–Protein interactions for RNA: ENST00000585395.6

LSM7-202, Transcript of LSM7 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 3

Gene LSM7, Length 621 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM7-202ENST00000585395 BRF1Q92994 677 aa26.79■■□□□ 1.88
LSM7-202ENST00000585395 A1CFQ9NQ94 594 aaKnown RBP26.79■■□□□ 1.88
LSM7-202ENST00000585395 PDRG1Q9NUG6 133 aa26.79■■□□□ 1.88
LSM7-202ENST00000585395 RBM28Q9NW13 759 aaKnown RBP26.79■■□□□ 1.88
LSM7-202ENST00000585395 MAD2L2Q9UI95 211 aa26.79■■□□□ 1.88
LSM7-202ENST00000585395 NAP1L2Q9ULW6 460 aaPredicted RBP26.79■■□□□ 1.88
LSM7-202ENST00000585395 PRUNE2Q8WUY3 3088 aa26.78■■□□□ 1.88
LSM7-202ENST00000585395 DNAJC25-GNG10A0A024R161 153 aa26.78■■□□□ 1.88
LSM7-202ENST00000585395 KLF18A0A0U1RQI7 1052 aa26.78■■□□□ 1.88
LSM7-202ENST00000585395 TAL1P17542 331 aaPredicted RBP26.78■■□□□ 1.88
LSM7-202ENST00000585395 ANKRD1Q15327 319 aa26.78■■□□□ 1.88
LSM7-202ENST00000585395 MUM1L1Q5H9M0 696 aa26.78■■□□□ 1.88
LSM7-202ENST00000585395 APOA5Q6Q788 366 aa26.78■■□□□ 1.88
LSM7-202ENST00000585395 UPF3BQ9BZI7 483 aaKnown RBP26.78■■□□□ 1.88
LSM7-202ENST00000585395 PRDM6Q9NQX0 595 aa26.78■■□□□ 1.88
LSM7-202ENST00000585395 SYNGAP1Q96PV0 1343 aa26.78■■□□□ 1.88
LSM7-202ENST00000585395 MYH6P13533 1939 aa26.77■■□□□ 1.88
LSM7-202ENST00000585395 CCDC196A0A1B0GTZ2 297 aa26.77■■□□□ 1.88
LSM7-202ENST00000585395 IGHA2P01877 340 aa26.77■■□□□ 1.88
LSM7-202ENST00000585395 RARBP10826 455 aa26.77■■□□□ 1.88
LSM7-202ENST00000585395 SMARCA1P28370 1054 aa26.77■■□□□ 1.88
LSM7-202ENST00000585395 ZNF467Q7Z7K2 595 aaPredicted RBP26.77■■□□□ 1.88
LSM7-202ENST00000585395 MICU3Q86XE3 530 aa26.77■■□□□ 1.88
LSM7-202ENST00000585395 ARRDC4Q8NCT1 418 aa26.77■■□□□ 1.88
LSM7-202ENST00000585395 IL27Q8NEV9 243 aa26.77■■□□□ 1.88
LSM7-202ENST00000585395 AGXT2Q9BYV1 514 aa26.77■■□□□ 1.88
LSM7-202ENST00000585395 CPVLQ9H3G5 476 aa26.77■■□□□ 1.88
LSM7-202ENST00000585395 MCM3APO60318 1980 aa26.77■■□□□ 1.88
LSM7-202ENST00000585395 PTPDC1A2A3K4 754 aa26.76■■□□□ 1.87
LSM7-202ENST00000585395 KBTBD13C9JR72 458 aa26.76■■□□□ 1.87
LSM7-202ENST00000585395 AKR1A1P14550 325 aa26.76■■□□□ 1.87
LSM7-202ENST00000585395 CNTN2Q02246 1040 aa26.76■■□□□ 1.87
LSM7-202ENST00000585395 COL9A3Q14050 684 aaPredicted RBP26.76■■□□□ 1.87
LSM7-202ENST00000585395 USH1GQ495M9 461 aa26.76■■□□□ 1.87
LSM7-202ENST00000585395 FANCBQ8NB91 859 aa26.76■■□□□ 1.87
LSM7-202ENST00000585395 CDX2Q99626 313 aaPredicted RBP26.76■■□□□ 1.87
LSM7-202ENST00000585395 MYL10Q9BUA6 226 aa26.76■■□□□ 1.87
LSM7-202ENST00000585395 SENP6Q9GZR1 1112 aaPredicted RBP26.76■■□□□ 1.87
LSM7-202ENST00000585395 VAT1LQ9HCJ6 419 aa26.76■■□□□ 1.87
LSM7-202ENST00000585395 PRKAG2Q9UGJ0 569 aa26.76■■□□□ 1.87
LSM7-202ENST00000585395 RBM25P49756 843 aaKnown RBP26.75■■□□□ 1.87
LSM7-202ENST00000585395 CDC37Q16543 378 aaPredicted RBP26.75■■□□□ 1.87
LSM7-202ENST00000585395 ADGRF4Q8IZF3 695 aa26.75■■□□□ 1.87
LSM7-202ENST00000585395 STAG2Q8N3U4 1231 aa26.75■■□□□ 1.87
LSM7-202ENST00000585395 CDKN2AIPQ9NXV6 580 aaPredicted RBP26.75■■□□□ 1.87
LSM7-202ENST00000585395 SMCHD1A6NHR9 2005 aa26.75■■□□□ 1.87
LSM7-202ENST00000585395 ASB14A6NK59 587 aa26.74■■□□□ 1.87
LSM7-202ENST00000585395 GOLGA8AA7E2F4 631 aa26.74■■□□□ 1.87
LSM7-202ENST00000585395 GOLGA8BA8MQT2 603 aa26.74■■□□□ 1.87
LSM7-202ENST00000585395 RTN1Q16799 776 aa26.74■■□□□ 1.87
LSM7-202ENST00000585395 MAMDC4Q6UXC1 1216 aa26.74■■□□□ 1.87
LSM7-202ENST00000585395 ARMCX2Q7L311 632 aa26.74■■□□□ 1.87
LSM7-202ENST00000585395 MAFAQ8NHW3 353 aaPredicted RBP26.74■■□□□ 1.87
LSM7-202ENST00000585395 BACH2Q9BYV9 841 aa26.74■■□□□ 1.87
LSM7-202ENST00000585395 ALDH8A1Q9H2A2 487 aaPredicted RBP26.74■■□□□ 1.87
LSM7-202ENST00000585395 FAM184BQ9ULE4 1060 aa26.74■■□□□ 1.87
LSM7-202ENST00000585395 TTC28Q96AY4 2481 aa26.73■■□□□ 1.87
LSM7-202ENST00000585395 DNM1LO00429 736 aa26.73■■□□□ 1.87
LSM7-202ENST00000585395 METAP2P50579 478 aaKnown RBP eCLIP26.73■■□□□ 1.873e-6■■□□□ 14.5
LSM7-202ENST00000585395 APOBRQ0VD83 1088 aa26.73■■□□□ 1.87
LSM7-202ENST00000585395 GJC2Q5T442 439 aaPredicted RBP26.73■■□□□ 1.87
LSM7-202ENST00000585395 CCDC144CPQ8IYA2 1237 aa26.73■■□□□ 1.87
LSM7-202ENST00000585395 FAM133AQ8N9E0 248 aa26.73■■□□□ 1.87
LSM7-202ENST00000585395 SPZ1Q9BXG8 430 aa26.73■■□□□ 1.87
LSM7-202ENST00000585395 XPNPEP3Q9NQH7 507 aa26.73■■□□□ 1.87
LSM7-202ENST00000585395 CYP39A1Q9NYL5 469 aa26.73■■□□□ 1.87
LSM7-202ENST00000585395 NFIBO00712 420 aa26.72■■□□□ 1.87
LSM7-202ENST00000585395 ACVR2BQ13705 512 aa26.72■■□□□ 1.87
LSM7-202ENST00000585395 ABHD16BQ9H3Z7 469 aa26.72■■□□□ 1.87
LSM7-202ENST00000585395 RIOX1Q9H6W3 641 aa26.72■■□□□ 1.87
LSM7-202ENST00000585395 JMJD4Q9H9V9 463 aa26.72■■□□□ 1.87
LSM7-202ENST00000585395 ADD3Q9UEY8 706 aaKnown RBP26.72■■□□□ 1.87
LSM7-202ENST00000585395 SEC63Q9UGP8 760 aaKnown RBP26.72■■□□□ 1.87
LSM7-202ENST00000585395 BRPF3Q9ULD4 1205 aa26.72■■□□□ 1.87
LSM7-202ENST00000585395 SNAI1O95863 264 aaPredicted RBP26.71■■□□□ 1.87
LSM7-202ENST00000585395 ZNF865P0CJ78 1059 aaPredicted RBP26.71■■□□□ 1.87
LSM7-202ENST00000585395 CALML3P27482 149 aa26.71■■□□□ 1.87
LSM7-202ENST00000585395 NEK4P51957 841 aa26.71■■□□□ 1.87
LSM7-202ENST00000585395 EVCP57679 992 aa26.71■■□□□ 1.87
LSM7-202ENST00000585395 BAATQ14032 418 aaPredicted RBP26.71■■□□□ 1.87
LSM7-202ENST00000585395 RNF207Q6ZRF8 634 aa26.71■■□□□ 1.87
LSM7-202ENST00000585395 RRP36Q96EU6 259 aaKnown RBP26.71■■□□□ 1.87
LSM7-202ENST00000585395 MPHOSPH6Q99547 160 aaKnown RBP26.71■■□□□ 1.87
LSM7-202ENST00000585395 SEMA6BQ9H3T3 888 aa26.71■■□□□ 1.87
LSM7-202ENST00000585395 ZBTB5O15062 677 aa26.7■■□□□ 1.86
LSM7-202ENST00000585395 RXRAP19793 462 aa26.7■■□□□ 1.86
LSM7-202ENST00000585395 RNF180Q86T96 592 aa26.7■■□□□ 1.86
LSM7-202ENST00000585395 FBXO11Q86XK2 927 aa26.7■■□□□ 1.86
LSM7-202ENST00000585395 SYMPKQ92797 1274 aaKnown RBP26.7■■□□□ 1.86
LSM7-202ENST00000585395 ZNF274Q96GC6 653 aaPredicted RBP26.7■■□□□ 1.86
LSM7-202ENST00000585395 AMNQ9BXJ7 453 aa26.7■■□□□ 1.86
LSM7-202ENST00000585395 LTBP2Q14767 1821 aa26.69■■□□□ 1.86
LSM7-202ENST00000585395 ABCB11O95342 1321 aa26.69■■□□□ 1.86
LSM7-202ENST00000585395 SOWAHBA6NEL2 793 aa26.69■■□□□ 1.86
LSM7-202ENST00000585395 TOB2Q14106 344 aaPredicted RBP26.69■■□□□ 1.86
LSM7-202ENST00000585395 QRICH1Q2TAL8 776 aa26.69■■□□□ 1.86
LSM7-202ENST00000585395 TMTC3Q6ZXV5 915 aa26.69■■□□□ 1.86
LSM7-202ENST00000585395 NOL8Q76FK4 1167 aaKnown RBP26.69■■□□□ 1.86
LSM7-202ENST00000585395 RAB11FIP4Q86YS3 637 aa26.69■■□□□ 1.86
LSM7-202ENST00000585395 FGD4Q96M96 766 aa26.69■■□□□ 1.86
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms