RNA–Protein interactions for RNA: ENST00000585335.1

SCAMP4-209, Transcript of secretory carrier membrane protein 4, humanhuman

TSL 5

Gene SCAMP4, Length 432 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-209ENST00000585335 PKN1Q16512 942 aa16.78■□□□□ 0.28
SCAMP4-209ENST00000585335 MPHOSPH6Q99547 160 aaKnown RBP16.78■□□□□ 0.28
SCAMP4-209ENST00000585335 PSTPIP2Q9H939 334 aa16.78■□□□□ 0.28
SCAMP4-209ENST00000585335 CYP39A1Q9NYL5 469 aa16.78■□□□□ 0.28
SCAMP4-209ENST00000585335 RBBP6Q7Z6E9 1792 aaKnown RBP16.78■□□□□ 0.28
SCAMP4-209ENST00000585335 ZSWIM8A7E2V4 1837 aa16.77■□□□□ 0.28
SCAMP4-209ENST00000585335 B4DLN1 442 aa16.77■□□□□ 0.28
SCAMP4-209ENST00000585335 HSP90AA1P07900 732 aaKnown RBP16.77■□□□□ 0.28
SCAMP4-209ENST00000585335 HOXC6P09630 235 aa16.77■□□□□ 0.28
SCAMP4-209ENST00000585335 XRCC5P13010 732 aaKnown RBP16.77■□□□□ 0.28
SCAMP4-209ENST00000585335 CYP2B6P20813 491 aa16.77■□□□□ 0.28
SCAMP4-209ENST00000585335 CALML3P27482 149 aa16.77■□□□□ 0.28
SCAMP4-209ENST00000585335 GNA11P29992 359 aa16.77■□□□□ 0.28
SCAMP4-209ENST00000585335 RPS6P62753 249 aaKnown RBP16.77■□□□□ 0.28
SCAMP4-209ENST00000585335 ST3GAL1Q11201 340 aa16.77■□□□□ 0.28
SCAMP4-209ENST00000585335 BAATQ14032 418 aaPredicted RBP16.77■□□□□ 0.28
SCAMP4-209ENST00000585335 BECN1Q14457 450 aa16.77■□□□□ 0.28
SCAMP4-209ENST00000585335 SMARCC2Q8TAQ2 1214 aa16.77■□□□□ 0.28
SCAMP4-209ENST00000585335 BICD2Q8TD16 824 aa16.77■□□□□ 0.28
SCAMP4-209ENST00000585335 ALG1Q9BT22 464 aa16.77■□□□□ 0.28
SCAMP4-209ENST00000585335 C6orf50Q9HD87 102 aa16.77■□□□□ 0.28
SCAMP4-209ENST00000585335 ADD3Q9UEY8 706 aaKnown RBP16.77■□□□□ 0.28
SCAMP4-209ENST00000585335 GJD2Q9UKL4 321 aa16.77■□□□□ 0.28
SCAMP4-209ENST00000585335 GABRQQ9UN88 632 aa16.77■□□□□ 0.28
SCAMP4-209ENST00000585335 SMC3Q9UQE7 1217 aa16.77■□□□□ 0.28
SCAMP4-209ENST00000585335 DIS3Q9Y2L1 958 aaKnown RBP16.77■□□□□ 0.28
SCAMP4-209ENST00000585335 ESYT2A0FGR8 921 aa16.76■□□□□ 0.27
SCAMP4-209ENST00000585335 SMCO2A6NFE2 343 aa16.76■□□□□ 0.27
SCAMP4-209ENST00000585335 JAK2O60674 1132 aa16.76■□□□□ 0.27
SCAMP4-209ENST00000585335 PGK2P07205 417 aa16.76■□□□□ 0.27
SCAMP4-209ENST00000585335 HSD17B4P51659 736 aa16.76■□□□□ 0.27
SCAMP4-209ENST00000585335 NLRP5P59047 1200 aa16.76■□□□□ 0.27
SCAMP4-209ENST00000585335 MCTP2Q6DN12 878 aa16.76■□□□□ 0.27
SCAMP4-209ENST00000585335 SLC30A10Q6XR72 485 aa16.76■□□□□ 0.27
SCAMP4-209ENST00000585335 USP6NLQ92738 828 aa16.76■□□□□ 0.27
SCAMP4-209ENST00000585335 RIC8AQ9NPQ8 531 aa16.76■□□□□ 0.27
SCAMP4-209ENST00000585335 VPS54Q9P1Q0 977 aa16.76■□□□□ 0.27
SCAMP4-209ENST00000585335 PTPN22Q9Y2R2 807 aa16.76■□□□□ 0.27
SCAMP4-209ENST00000585335 DNAJC25-GNG10A0A024R161 153 aa16.75■□□□□ 0.27
SCAMP4-209ENST00000585335 PIK3CDO00329 1044 aa16.75■□□□□ 0.27
SCAMP4-209ENST00000585335 COBLO75128 1261 aa16.75■□□□□ 0.27
SCAMP4-209ENST00000585335 CAP1Q01518 475 aa16.75■□□□□ 0.27
SCAMP4-209ENST00000585335 GHRHRQ02643 423 aa16.75■□□□□ 0.27
SCAMP4-209ENST00000585335 CUL4AQ13619 759 aa16.75■□□□□ 0.27
SCAMP4-209ENST00000585335 GALNT17Q6IS24 598 aa16.75■□□□□ 0.27
SCAMP4-209ENST00000585335 FBXO46Q6PJ61 603 aaPredicted RBP16.75■□□□□ 0.27
SCAMP4-209ENST00000585335 ZNF467Q7Z7K2 595 aaPredicted RBP16.75■□□□□ 0.27
SCAMP4-209ENST00000585335 SLAIN1Q8ND83 568 aa16.75■□□□□ 0.27
SCAMP4-209ENST00000585335 DNERQ8NFT8 737 aa16.75■□□□□ 0.27
SCAMP4-209ENST00000585335 EHMT1Q9H9B1 1298 aa16.75■□□□□ 0.27
SCAMP4-209ENST00000585335 BRMS1Q9HCU9 246 aa16.75■□□□□ 0.27
SCAMP4-209ENST00000585335 LOC102724159A0A0B4J2E5 919 aa16.74■□□□□ 0.27
SCAMP4-209ENST00000585335 SPDYE3A6NKU9 549 aa16.74■□□□□ 0.27
SCAMP4-209ENST00000585335 OPLAHO14841 1288 aa16.74■□□□□ 0.27
SCAMP4-209ENST00000585335 ADCY3O60266 1144 aa16.74■□□□□ 0.27
SCAMP4-209ENST00000585335 PWP2Q15269 919 aaKnown RBP16.74■□□□□ 0.27
SCAMP4-209ENST00000585335 ZNF792Q3KQV3 632 aa16.74■□□□□ 0.27
SCAMP4-209ENST00000585335 MFSD14CQ5VZR4 134 aa16.74■□□□□ 0.27
SCAMP4-209ENST00000585335 OLFML2BQ68BL8 750 aa16.74■□□□□ 0.27
SCAMP4-209ENST00000585335 MSL3Q8N5Y2 521 aaKnown RBP16.74■□□□□ 0.27
SCAMP4-209ENST00000585335 FAM133AQ8N9E0 248 aa16.74■□□□□ 0.27
SCAMP4-209ENST00000585335 SYTL5Q8TDW5 730 aaPredicted RBP16.74■□□□□ 0.27
SCAMP4-209ENST00000585335 PXYLP1Q8TE99 480 aa16.74■□□□□ 0.27
SCAMP4-209ENST00000585335 INTS4Q96HW7 963 aaKnown RBP16.74■□□□□ 0.27
SCAMP4-209ENST00000585335 ZMYND12Q9H0C1 365 aa16.74■□□□□ 0.27
SCAMP4-209ENST00000585335 PTCH2Q9Y6C5 1203 aa16.74■□□□□ 0.27
SCAMP4-209ENST00000585335 SMCHD1A6NHR9 2005 aa16.74■□□□□ 0.27
SCAMP4-209ENST00000585335 ASB14A6NK59 587 aa16.73■□□□□ 0.27
SCAMP4-209ENST00000585335 FOSP01100 380 aaPredicted RBP16.73■□□□□ 0.27
SCAMP4-209ENST00000585335 FDPSP14324 419 aaKnown RBP16.73■□□□□ 0.27
SCAMP4-209ENST00000585335 HOXA13P31271 388 aaPredicted RBP16.73■□□□□ 0.27
SCAMP4-209ENST00000585335 CNTN2Q02246 1040 aa16.73■□□□□ 0.27
SCAMP4-209ENST00000585335 FCHSD1Q86WN1 690 aa16.73■□□□□ 0.27
SCAMP4-209ENST00000585335 REXO1Q8N1G1 1221 aaKnown RBP16.73■□□□□ 0.27
SCAMP4-209ENST00000585335 NPLOC4Q8TAT6 608 aa16.73■□□□□ 0.27
SCAMP4-209ENST00000585335 NSUN6Q8TEA1 469 aaKnown RBP16.73■□□□□ 0.27
SCAMP4-209ENST00000585335 MAML3Q96JK9 1138 aa16.73■□□□□ 0.27
SCAMP4-209ENST00000585335 C8orf76Q96K31 380 aa16.73■□□□□ 0.27
SCAMP4-209ENST00000585335 RMDN3Q96TC7 470 aa16.73■□□□□ 0.27
SCAMP4-209ENST00000585335 BIN2Q9UBW5 565 aaPredicted RBP16.73■□□□□ 0.27
SCAMP4-209ENST00000585335 ZNFX1Q9P2E3 1918 aaKnown RBP16.72■□□□□ 0.27
SCAMP4-209ENST00000585335 GRK4P32298 578 aa16.72■□□□□ 0.27
SCAMP4-209ENST00000585335 ANP32AP39687 249 aaKnown RBP16.72■□□□□ 0.27
SCAMP4-209ENST00000585335 AP3B2Q13367 1082 aa16.72■□□□□ 0.27
SCAMP4-209ENST00000585335 SAFBQ15424 915 aaKnown RBP eCLIP16.72■□□□□ 0.27
SCAMP4-209ENST00000585335 SLC9C1Q4G0N8 1177 aa16.72■□□□□ 0.27
SCAMP4-209ENST00000585335 ARHGEF16Q5VV41 709 aa16.72■□□□□ 0.27
SCAMP4-209ENST00000585335 TYW1BQ6NUM6 668 aa16.72■□□□□ 0.27
SCAMP4-209ENST00000585335 USP17L6PQ6QN14 398 aa16.72■□□□□ 0.27
SCAMP4-209ENST00000585335 TBC1D5Q92609 795 aa16.72■□□□□ 0.27
SCAMP4-209ENST00000585335 AIFM3Q96NN9 605 aa16.72■□□□□ 0.27
SCAMP4-209ENST00000585335 PCDHA4Q9UN74 947 aa16.72■□□□□ 0.27
SCAMP4-209ENST00000585335 DOCK3Q8IZD9 2030 aa16.72■□□□□ 0.27
SCAMP4-209ENST00000585335 SYNGAP1Q96PV0 1343 aa16.71■□□□□ 0.27
SCAMP4-209ENST00000585335 MEIS2O14770 477 aa16.71■□□□□ 0.27
SCAMP4-209ENST00000585335 HMGCRP04035 888 aa16.71■□□□□ 0.27
SCAMP4-209ENST00000585335 PDCP20941 246 aa16.71■□□□□ 0.27
SCAMP4-209ENST00000585335 GJB2P29033 226 aa16.71■□□□□ 0.27
SCAMP4-209ENST00000585335 ALDH5A1P51649 535 aaPredicted RBP16.71■□□□□ 0.27
SCAMP4-209ENST00000585335 PDE4DQ08499 809 aa16.71■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms