RNA–Protein interactions for RNA: ENST00000585026.1

CSNK1D-226, Transcript of casein kinase 1 delta, humanhuman

TSL 5

Gene CSNK1D, Length 563 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-226ENST00000585026 ATP2A2P16615 1042 aaKnown RBP12.65□□□□□ -0.38
CSNK1D-226ENST00000585026 ADGRE1Q14246 886 aa12.65□□□□□ -0.38
CSNK1D-226ENST00000585026 ZMYM1Q5SVZ6 1142 aa12.65□□□□□ -0.38
CSNK1D-226ENST00000585026 TSHZ3Q63HK5 1081 aa12.65□□□□□ -0.38
CSNK1D-226ENST00000585026 MORC4Q8TE76 937 aa12.65□□□□□ -0.38
CSNK1D-226ENST00000585026 ALDH8A1Q9H2A2 487 aaPredicted RBP12.65□□□□□ -0.38
CSNK1D-226ENST00000585026 PDGFCQ9NRA1 345 aa12.65□□□□□ -0.38
CSNK1D-226ENST00000585026 LAMA2P24043 3122 aaKnown RBP12.65□□□□□ -0.38
CSNK1D-226ENST00000585026 NKRFO15226 690 aaKnown RBP eCLIP12.64□□□□□ -0.39
CSNK1D-226ENST00000585026 RFC2P35250 354 aa12.64□□□□□ -0.39
CSNK1D-226ENST00000585026 PSMC6P62333 389 aa12.64□□□□□ -0.39
CSNK1D-226ENST00000585026 NUCB1Q02818 461 aa12.64□□□□□ -0.39
CSNK1D-226ENST00000585026 MUM1L1Q5H9M0 696 aa12.64□□□□□ -0.39
CSNK1D-226ENST00000585026 TMEM67Q5HYA8 995 aa12.64□□□□□ -0.39
CSNK1D-226ENST00000585026 RETREG2Q8NC44 543 aa12.64□□□□□ -0.39
CSNK1D-226ENST00000585026 CHMP4CQ96CF2 233 aa12.64□□□□□ -0.39
CSNK1D-226ENST00000585026 SEC62Q99442 399 aaKnown RBP12.64□□□□□ -0.39
CSNK1D-226ENST00000585026 MTG1Q9BT17 334 aaPredicted RBP12.64□□□□□ -0.39
CSNK1D-226ENST00000585026 WDR11Q9BZH6 1224 aa12.64□□□□□ -0.39
CSNK1D-226ENST00000585026 MTMR7Q9Y216 660 aa12.64□□□□□ -0.39
CSNK1D-226ENST00000585026 DDX52Q9Y2R4 599 aaKnown RBP eCLIP12.64□□□□□ -0.391e-6■■■■□ 21.8
CSNK1D-226ENST00000585026 YBX2Q9Y2T7 364 aaKnown RBP12.64□□□□□ -0.39
CSNK1D-226ENST00000585026 GRIN2DO15399 1336 aa12.63□□□□□ -0.39
CSNK1D-226ENST00000585026 TNKSO95271 1327 aa12.63□□□□□ -0.39
CSNK1D-226ENST00000585026 UMODL1Q5DID0 1318 aa12.63□□□□□ -0.39
CSNK1D-226ENST00000585026 MYO9BQ13459 2157 aa12.63□□□□□ -0.39
CSNK1D-226ENST00000585026 PTPDC1A2A3K4 754 aa12.63□□□□□ -0.39
CSNK1D-226ENST00000585026 KIF28PB7ZC32 967 aa12.63□□□□□ -0.39
CSNK1D-226ENST00000585026 MYL3P08590 195 aa12.63□□□□□ -0.39
CSNK1D-226ENST00000585026 ALDH5A1P51649 535 aaPredicted RBP12.63□□□□□ -0.39
CSNK1D-226ENST00000585026 SNAP25P60880 206 aa12.63□□□□□ -0.39
CSNK1D-226ENST00000585026 BAATQ14032 418 aaPredicted RBP12.63□□□□□ -0.39
CSNK1D-226ENST00000585026 SKIV2LQ15477 1246 aaKnown RBP12.63□□□□□ -0.39
CSNK1D-226ENST00000585026 SYDE2Q5VT97 1194 aa12.63□□□□□ -0.39
CSNK1D-226ENST00000585026 MICALL1Q8N3F8 863 aa12.63□□□□□ -0.39
CSNK1D-226ENST00000585026 PHOSPHO2Q8TCD6 241 aa12.63□□□□□ -0.39
CSNK1D-226ENST00000585026 SCLYQ96I15 445 aa12.63□□□□□ -0.39
CSNK1D-226ENST00000585026 WNT8AQ9H1J5 351 aa12.63□□□□□ -0.39
CSNK1D-226ENST00000585026 RANBP17Q9H2T7 1088 aaKnown RBP12.63□□□□□ -0.39
CSNK1D-226ENST00000585026 TOMM22Q9NS69 142 aa12.63□□□□□ -0.39
CSNK1D-226ENST00000585026 ANAPC4Q9UJX5 808 aa12.63□□□□□ -0.39
CSNK1D-226ENST00000585026 VCANP13611 3396 aa12.63□□□□□ -0.39
CSNK1D-226ENST00000585026 SALL3Q9BXA9 1300 aa12.62□□□□□ -0.39
CSNK1D-226ENST00000585026 ORC4O43929 436 aa12.62□□□□□ -0.39
CSNK1D-226ENST00000585026 TOP1P11387 765 aaKnown RBP12.62□□□□□ -0.39
CSNK1D-226ENST00000585026 RABGGTBP53611 331 aa12.62□□□□□ -0.39
CSNK1D-226ENST00000585026 PURAQ00577 322 aaKnown RBP12.62□□□□□ -0.39
CSNK1D-226ENST00000585026 CTDSPL2Q05D32 466 aa12.62□□□□□ -0.39
CSNK1D-226ENST00000585026 PTPN11Q06124 597 aaPredicted RBP12.62□□□□□ -0.39
CSNK1D-226ENST00000585026 PDE4DQ08499 809 aa12.62□□□□□ -0.39
CSNK1D-226ENST00000585026 BFSP2Q13515 415 aa12.62□□□□□ -0.39
CSNK1D-226ENST00000585026 PPP2R5BQ15173 497 aa12.62□□□□□ -0.39
CSNK1D-226ENST00000585026 FAM47CQ5HY64 1035 aa12.62□□□□□ -0.39
CSNK1D-226ENST00000585026 BTNL9Q6UXG8 535 aa12.62□□□□□ -0.39
CSNK1D-226ENST00000585026 OR6J1Q8NGC5 347 aa12.62□□□□□ -0.39
CSNK1D-226ENST00000585026 PI4K2BQ8TCG2 481 aa12.62□□□□□ -0.39
CSNK1D-226ENST00000585026 SLC9A7Q96T83 725 aa12.62□□□□□ -0.39
CSNK1D-226ENST00000585026 C1QTNF1Q9BXJ1 281 aa12.62□□□□□ -0.39
CSNK1D-226ENST00000585026 IL17RBQ9NRM6 502 aa12.62□□□□□ -0.39
CSNK1D-226ENST00000585026 TRMT13Q9NUP7 481 aaKnown RBP12.62□□□□□ -0.39
CSNK1D-226ENST00000585026 NOD1Q9Y239 953 aa12.62□□□□□ -0.39
CSNK1D-226ENST00000585026 CDH23Q9H251 3354 aa12.61□□□□□ -0.39
CSNK1D-226ENST00000585026 MYH4Q9Y623 1939 aa12.61□□□□□ -0.39
CSNK1D-226ENST00000585026 RBM47A0AV96 593 aaKnown RBP12.61□□□□□ -0.39
CSNK1D-226ENST00000585026 PITPNM1O00562 1244 aa12.61□□□□□ -0.39
CSNK1D-226ENST00000585026 NMT2O60551 498 aa12.61□□□□□ -0.39
CSNK1D-226ENST00000585026 CYP2C9P11712 490 aa12.61□□□□□ -0.39
CSNK1D-226ENST00000585026 MX1P20591 662 aa12.61□□□□□ -0.39
CSNK1D-226ENST00000585026 CALML3P27482 149 aa12.61□□□□□ -0.39
CSNK1D-226ENST00000585026 NOVP48745 357 aa12.61□□□□□ -0.39
CSNK1D-226ENST00000585026 NFRKBQ6P4R8 1299 aa12.61□□□□□ -0.39
CSNK1D-226ENST00000585026 RNF207Q6ZRF8 634 aa12.61□□□□□ -0.39
CSNK1D-226ENST00000585026 DEFB128Q7Z7B8 93 aa12.61□□□□□ -0.39
CSNK1D-226ENST00000585026 CCDC155Q8N6L0 562 aa12.61□□□□□ -0.39
CSNK1D-226ENST00000585026 DNERQ8NFT8 737 aa12.61□□□□□ -0.39
CSNK1D-226ENST00000585026 SCFD2Q8WU76 684 aa12.61□□□□□ -0.39
CSNK1D-226ENST00000585026 FTOQ9C0B1 505 aaKnown RBP eCLIP12.61□□□□□ -0.393e-10■■■■■ 39.9
CSNK1D-226ENST00000585026 COG5Q9UP83 839 aa12.61□□□□□ -0.39
CSNK1D-226ENST00000585026 POU3F3P20264 500 aaPredicted RBP12.6□□□□□ -0.39
CSNK1D-226ENST00000585026 SLC16A2P36021 539 aa12.6□□□□□ -0.39
CSNK1D-226ENST00000585026 TTLL4Q14679 1199 aa12.6□□□□□ -0.39
CSNK1D-226ENST00000585026 ALX1Q15699 326 aa12.6□□□□□ -0.39
CSNK1D-226ENST00000585026 NBPF20Q3BBV1 942 aa12.6□□□□□ -0.39
CSNK1D-226ENST00000585026 RRP12Q5JTH9 1297 aaKnown RBP12.6□□□□□ -0.39
CSNK1D-226ENST00000585026 CHD1LQ86WJ1 897 aa12.6□□□□□ -0.39
CSNK1D-226ENST00000585026 TICAM2Q86XR7 235 aa12.6□□□□□ -0.39
CSNK1D-226ENST00000585026 EVI5LQ96CN4 794 aa12.6□□□□□ -0.39
CSNK1D-226ENST00000585026 TTC14Q96N46 770 aa12.6□□□□□ -0.39
CSNK1D-226ENST00000585026 MAF1Q9H063 256 aa12.6□□□□□ -0.39
CSNK1D-226ENST00000585026 HELLSQ9NRZ9 838 aa12.6□□□□□ -0.39
CSNK1D-226ENST00000585026 TCP11L1Q9NUJ3 509 aa12.6□□□□□ -0.39
CSNK1D-226ENST00000585026 DDX49Q9Y6V7 483 aaKnown RBP12.6□□□□□ -0.39
CSNK1D-226ENST00000585026 MCM3APO60318 1980 aa12.6□□□□□ -0.39
CSNK1D-226ENST00000585026 NFIBO00712 420 aa12.59□□□□□ -0.39
CSNK1D-226ENST00000585026 BAIAP3O94812 1187 aa12.59□□□□□ -0.39
CSNK1D-226ENST00000585026 CA3P07451 260 aa12.59□□□□□ -0.39
CSNK1D-226ENST00000585026 FGRP09769 529 aa12.59□□□□□ -0.39
CSNK1D-226ENST00000585026 PCP11498 1178 aaKnown RBP12.59□□□□□ -0.39
CSNK1D-226ENST00000585026 MYOGP15173 224 aa12.59□□□□□ -0.39
CSNK1D-226ENST00000585026 PTGS1P23219 599 aa12.59□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms