RNA–Protein interactions for RNA: ENST00000583708.5

UBBP4-201, Transcript of ubiquitin B pseudogene 4, humanhuman

BASIC

Gene UBBP4, Length 689 nt, Biotype transcribed unprocessed pseudogene, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBBP4-201ENST00000583708 CYP39A1Q9NYL5 469 aa10.71□□□□□ -0.69
UBBP4-201ENST00000583708 SMC3Q9UQE7 1217 aa10.71□□□□□ -0.69
UBBP4-201ENST00000583708 SMCO2A6NFE2 343 aa10.7□□□□□ -0.7
UBBP4-201ENST00000583708 ASB14A6NK59 587 aa10.7□□□□□ -0.7
UBBP4-201ENST00000583708 PPP1R11O60927 126 aaPredicted RBP10.7□□□□□ -0.7
UBBP4-201ENST00000583708 STAM2O75886 525 aa10.7□□□□□ -0.7
UBBP4-201ENST00000583708 LARGE1O95461 756 aa10.7□□□□□ -0.7
UBBP4-201ENST00000583708 ADORA2AP29274 412 aa10.7□□□□□ -0.7
UBBP4-201ENST00000583708 SAFBQ15424 915 aaKnown RBP eCLIP10.7□□□□□ -0.7
UBBP4-201ENST00000583708 ZNF792Q3KQV3 632 aa10.7□□□□□ -0.7
UBBP4-201ENST00000583708 USH1GQ495M9 461 aa10.7□□□□□ -0.7
UBBP4-201ENST00000583708 WDR78Q5VTH9 848 aa10.7□□□□□ -0.7
UBBP4-201ENST00000583708 WWC2Q6AWC2 1192 aa10.7□□□□□ -0.7
UBBP4-201ENST00000583708 MAMDC4Q6UXC1 1216 aa10.7□□□□□ -0.7
UBBP4-201ENST00000583708 NOL8Q76FK4 1167 aaKnown RBP10.7□□□□□ -0.7
UBBP4-201ENST00000583708 FAM133AQ8N9E0 248 aa10.7□□□□□ -0.7
UBBP4-201ENST00000583708 CD99L2Q8TCZ2 262 aa10.7□□□□□ -0.7
UBBP4-201ENST00000583708 NSUN6Q8TEA1 469 aaKnown RBP10.7□□□□□ -0.7
UBBP4-201ENST00000583708 APBA2Q99767 749 aa10.7□□□□□ -0.7
UBBP4-201ENST00000583708 ALG1Q9BT22 464 aa10.7□□□□□ -0.7
UBBP4-201ENST00000583708 A1CFQ9NQ94 594 aaKnown RBP10.7□□□□□ -0.7
UBBP4-201ENST00000583708 PARP14Q460N5 1801 aa10.7□□□□□ -0.7
UBBP4-201ENST00000583708 CD2BP2O95400 341 aaKnown RBP10.69□□□□□ -0.7
UBBP4-201ENST00000583708 HSP90AA1P07900 732 aaKnown RBP10.69□□□□□ -0.7
UBBP4-201ENST00000583708 FDPSP14324 419 aaKnown RBP10.69□□□□□ -0.7
UBBP4-201ENST00000583708 ANP32AP39687 249 aaKnown RBP10.69□□□□□ -0.7
UBBP4-201ENST00000583708 ADCY7P51828 1080 aa10.69□□□□□ -0.7
UBBP4-201ENST00000583708 LBX1P52954 281 aa10.69□□□□□ -0.7
UBBP4-201ENST00000583708 NLRP5P59047 1200 aa10.69□□□□□ -0.7
UBBP4-201ENST00000583708 SNAP25P60880 206 aa10.69□□□□□ -0.7
UBBP4-201ENST00000583708 RPS6P62753 249 aaKnown RBP10.69□□□□□ -0.7
UBBP4-201ENST00000583708 BAATQ14032 418 aaPredicted RBP10.69□□□□□ -0.7
UBBP4-201ENST00000583708 MUM1L1Q5H9M0 696 aa10.69□□□□□ -0.7
UBBP4-201ENST00000583708 NSMFQ6X4W1 530 aa10.69□□□□□ -0.7
UBBP4-201ENST00000583708 OTOP1Q7RTM1 612 aa10.69□□□□□ -0.7
UBBP4-201ENST00000583708 SLAIN1Q8ND83 568 aa10.69□□□□□ -0.7
UBBP4-201ENST00000583708 FBXO18Q8NFZ0 1043 aa10.69□□□□□ -0.7
UBBP4-201ENST00000583708 SYTL5Q8TDW5 730 aaPredicted RBP10.69□□□□□ -0.7
UBBP4-201ENST00000583708 PCDHA4Q9UN74 947 aa10.69□□□□□ -0.7
UBBP4-201ENST00000583708 PCNTO95613 3336 aa10.68□□□□□ -0.7
UBBP4-201ENST00000583708 SYNGAP1Q96PV0 1343 aa10.68□□□□□ -0.7
UBBP4-201ENST00000583708 SPDYE3A6NKU9 549 aa10.68□□□□□ -0.7
UBBP4-201ENST00000583708 NFIBO00712 420 aa10.68□□□□□ -0.7
UBBP4-201ENST00000583708 MAFGO15525 162 aa10.68□□□□□ -0.7
UBBP4-201ENST00000583708 CFBP00751 764 aa10.68□□□□□ -0.7
UBBP4-201ENST00000583708 SLC4A3P48751 1232 aa10.68□□□□□ -0.7
UBBP4-201ENST00000583708 FLT3LGP49771 235 aa10.68□□□□□ -0.7
UBBP4-201ENST00000583708 MFSD14CQ5VZR4 134 aa10.68□□□□□ -0.7
UBBP4-201ENST00000583708 FBXO46Q6PJ61 603 aaPredicted RBP10.68□□□□□ -0.7
UBBP4-201ENST00000583708 REXO1Q8N1G1 1221 aaKnown RBP10.68□□□□□ -0.7
UBBP4-201ENST00000583708 RAET1EQ8TD07 263 aa10.68□□□□□ -0.7
UBBP4-201ENST00000583708 MORC4Q8TE76 937 aa10.68□□□□□ -0.7
UBBP4-201ENST00000583708 PIBF1Q8WXW3 757 aa10.68□□□□□ -0.7
UBBP4-201ENST00000583708 C8orf76Q96K31 380 aa10.68□□□□□ -0.7
UBBP4-201ENST00000583708 NAP1L4Q99733 375 aaKnown RBP10.68□□□□□ -0.7
UBBP4-201ENST00000583708 PHF20Q9BVI0 1012 aa10.68□□□□□ -0.7
UBBP4-201ENST00000583708 HOMER2Q9NSB8 354 aa10.68□□□□□ -0.7
UBBP4-201ENST00000583708 PTPN22Q9Y2R2 807 aa10.68□□□□□ -0.7
UBBP4-201ENST00000583708 TRIM17Q9Y577 477 aa10.68□□□□□ -0.7
UBBP4-201ENST00000583708 BAZ2BQ9UIF8 2168 aaKnown RBP10.67□□□□□ -0.7
UBBP4-201ENST00000583708 MEIS2O14770 477 aa10.67□□□□□ -0.7
UBBP4-201ENST00000583708 OPLAHO14841 1288 aa10.67□□□□□ -0.7
UBBP4-201ENST00000583708 IGHA2P01877 340 aa10.67□□□□□ -0.7
UBBP4-201ENST00000583708 USP11P51784 963 aa10.67□□□□□ -0.7
UBBP4-201ENST00000583708 ST3GAL1Q11201 340 aa10.67□□□□□ -0.7
UBBP4-201ENST00000583708 KCNV1Q6PIU1 500 aa10.67□□□□□ -0.7
UBBP4-201ENST00000583708 KRT25Q7Z3Z0 450 aa10.67□□□□□ -0.7
UBBP4-201ENST00000583708 BLIDQ8IZY5 108 aa10.67□□□□□ -0.7
UBBP4-201ENST00000583708 MAML3Q96JK9 1138 aa10.67□□□□□ -0.7
UBBP4-201ENST00000583708 RMDN3Q96TC7 470 aa10.67□□□□□ -0.7
UBBP4-201ENST00000583708 TINF2Q9BSI4 451 aa10.67□□□□□ -0.7
UBBP4-201ENST00000583708 FOXP1Q9H334 677 aaPredicted RBP10.67□□□□□ -0.7
UBBP4-201ENST00000583708 DAXXQ9UER7 740 aaPredicted RBP10.67□□□□□ -0.7
UBBP4-201ENST00000583708 FRMPD4Q14CM0 1322 aa10.66□□□□□ -0.7
UBBP4-201ENST00000583708 ZNF236Q9UL36 1845 aa10.66□□□□□ -0.7
UBBP4-201ENST00000583708 hCG_1642624A0A1W2PR95 340 aa10.66□□□□□ -0.7
UBBP4-201ENST00000583708 ADCY3O60266 1144 aa10.66□□□□□ -0.7
UBBP4-201ENST00000583708 JAK2O60674 1132 aa10.66□□□□□ -0.7
UBBP4-201ENST00000583708 COBLO75128 1261 aa10.66□□□□□ -0.7
UBBP4-201ENST00000583708 EIF3JO75822 258 aaKnown RBP10.66□□□□□ -0.7
UBBP4-201ENST00000583708 MMP1P03956 469 aa10.66□□□□□ -0.7
UBBP4-201ENST00000583708 TGFB3P10600 412 aa10.66□□□□□ -0.7
UBBP4-201ENST00000583708 EDNRBP24530 442 aa10.66□□□□□ -0.7
UBBP4-201ENST00000583708 GJB2P29033 226 aa10.66□□□□□ -0.7
UBBP4-201ENST00000583708 CTGFP29279 349 aa10.66□□□□□ -0.7
UBBP4-201ENST00000583708 CLK2P49760 499 aaKnown RBP10.66□□□□□ -0.7
UBBP4-201ENST00000583708 PRKCZQ05513 592 aa10.66□□□□□ -0.7
UBBP4-201ENST00000583708 STXBP2Q15833 593 aa10.66□□□□□ -0.7
UBBP4-201ENST00000583708 ARHGEF16Q5VV41 709 aa10.66□□□□□ -0.7
UBBP4-201ENST00000583708 LARP1BQ659C4 914 aaKnown RBP10.66□□□□□ -0.7
UBBP4-201ENST00000583708 GPKOWQ92917 476 aaPredicted RBP eCLIP10.66□□□□□ -0.7
UBBP4-201ENST00000583708 CDHR1Q96JP9 859 aa10.66□□□□□ -0.7
UBBP4-201ENST00000583708 ABHD16BQ9H3Z7 469 aa10.66□□□□□ -0.7
UBBP4-201ENST00000583708 H3BQV1 296 aa10.65□□□□□ -0.7
UBBP4-201ENST00000583708 PEX10O60683 326 aa10.65□□□□□ -0.7
UBBP4-201ENST00000583708 HMGCRP04035 888 aa10.65□□□□□ -0.7
UBBP4-201ENST00000583708 CYP3A4P08684 503 aa10.65□□□□□ -0.7
UBBP4-201ENST00000583708 CCND2P30279 289 aa10.65□□□□□ -0.7
UBBP4-201ENST00000583708 GRK4P32298 578 aa10.65□□□□□ -0.7
UBBP4-201ENST00000583708 KRT2P35908 639 aa10.65□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms