RNA–Protein interactions for RNA: ENST00000582308.1

RFFL-210, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

TSL 3

Gene RFFL, Length 398 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-210ENST00000582308 DHX30Q7L2E3 1194 aaKnown RBP eCLIP10.94□□□□□ -0.66
RFFL-210ENST00000582308 DIS3L2Q8IYB7 885 aaKnown RBP10.94□□□□□ -0.66
RFFL-210ENST00000582308 RASGRP4Q8TDF6 673 aa10.94□□□□□ -0.66
RFFL-210ENST00000582308 FOXD4L4Q8WXT5 416 aaPredicted RBP10.94□□□□□ -0.66
RFFL-210ENST00000582308 TNFRSF25Q93038 417 aa10.94□□□□□ -0.66
RFFL-210ENST00000582308 MROH8Q9H579 483 aa10.94□□□□□ -0.66
RFFL-210ENST00000582308 ACAD9Q9H845 621 aa10.94□□□□□ -0.66
RFFL-210ENST00000582308 TMEM260Q9NX78 707 aa10.94□□□□□ -0.66
RFFL-210ENST00000582308 COL20A1Q9P218 1284 aa10.94□□□□□ -0.66
RFFL-210ENST00000582308 BIN2Q9UBW5 565 aaPredicted RBP10.94□□□□□ -0.66
RFFL-210ENST00000582308 CIZ1Q9ULV3 898 aaPredicted RBP10.94□□□□□ -0.66
RFFL-210ENST00000582308 KIAA1217Q5T5P2 1943 aa10.94□□□□□ -0.66
RFFL-210ENST00000582308 KIF28PB7ZC32 967 aa10.93□□□□□ -0.66
RFFL-210ENST00000582308 GCOM1H8Y6P7 765 aaPredicted RBP10.93□□□□□ -0.66
RFFL-210ENST00000582308 BRD1O95696 1058 aa10.93□□□□□ -0.66
RFFL-210ENST00000582308 POLR2MP0CAP2 368 aa10.93□□□□□ -0.66
RFFL-210ENST00000582308 ZSCAN22P10073 491 aaPredicted RBP10.93□□□□□ -0.66
RFFL-210ENST00000582308 PDIA4P13667 645 aaKnown RBP10.93□□□□□ -0.66
RFFL-210ENST00000582308 U2AF2P26368 475 aaKnown RBP eCLIP10.93□□□□□ -0.661e-6■■□□□ 13.4
RFFL-210ENST00000582308 RPS6P62753 249 aaKnown RBP10.93□□□□□ -0.66
RFFL-210ENST00000582308 BAATQ14032 418 aaPredicted RBP10.93□□□□□ -0.66
RFFL-210ENST00000582308 SAFBQ15424 915 aaKnown RBP eCLIP10.93□□□□□ -0.66
RFFL-210ENST00000582308 JAKMIP3Q5VZ66 844 aa10.93□□□□□ -0.66
RFFL-210ENST00000582308 MCTP1Q6DN14 999 aa10.93□□□□□ -0.66
RFFL-210ENST00000582308 NSMFQ6X4W1 530 aa10.93□□□□□ -0.66
RFFL-210ENST00000582308 FERMT3Q86UX7 667 aa10.93□□□□□ -0.66
RFFL-210ENST00000582308 MCF2L2Q86YR7 1114 aa10.93□□□□□ -0.66
RFFL-210ENST00000582308 REXO1Q8N1G1 1221 aaKnown RBP10.93□□□□□ -0.66
RFFL-210ENST00000582308 BICD2Q8TD16 824 aa10.93□□□□□ -0.66
RFFL-210ENST00000582308 GLT8D2Q9H1C3 349 aa10.93□□□□□ -0.66
RFFL-210ENST00000582308 FOXP1Q9H334 677 aaPredicted RBP10.93□□□□□ -0.66
RFFL-210ENST00000582308 A1CFQ9NQ94 594 aaKnown RBP10.93□□□□□ -0.66
RFFL-210ENST00000582308 CYP39A1Q9NYL5 469 aa10.93□□□□□ -0.66
RFFL-210ENST00000582308 FBXO40Q9UH90 709 aa10.93□□□□□ -0.66
RFFL-210ENST00000582308 PCDHA6Q9UN73 950 aa10.93□□□□□ -0.66
RFFL-210ENST00000582308 PCDHA8Q9Y5H6 950 aa10.93□□□□□ -0.66
RFFL-210ENST00000582308 CASP8AP2Q9UKL3 1982 aa10.92□□□□□ -0.66
RFFL-210ENST00000582308 FAM205CA6NFA0 338 aa10.92□□□□□ -0.66
RFFL-210ENST00000582308 FCER1AP12319 257 aa10.92□□□□□ -0.66
RFFL-210ENST00000582308 CTGFP29279 349 aa10.92□□□□□ -0.66
RFFL-210ENST00000582308 MAPK4P31152 587 aa10.92□□□□□ -0.66
RFFL-210ENST00000582308 MAP2K1Q02750 393 aaPredicted RBP10.92□□□□□ -0.66
RFFL-210ENST00000582308 RESTQ13127 1097 aa10.92□□□□□ -0.66
RFFL-210ENST00000582308 EARS2Q5JPH6 523 aaKnown RBP10.92□□□□□ -0.66
RFFL-210ENST00000582308 WDR78Q5VTH9 848 aa10.92□□□□□ -0.66
RFFL-210ENST00000582308 SLC30A10Q6XR72 485 aa10.92□□□□□ -0.66
RFFL-210ENST00000582308 RNF207Q6ZRF8 634 aa10.92□□□□□ -0.66
RFFL-210ENST00000582308 FCHSD1Q86WN1 690 aa10.92□□□□□ -0.66
RFFL-210ENST00000582308 TEX2Q8IWB9 1127 aa10.92□□□□□ -0.66
RFFL-210ENST00000582308 CCAR1Q8IX12 1150 aaKnown RBP10.92□□□□□ -0.66
RFFL-210ENST00000582308 SAMD3Q8N6K7 520 aa10.92□□□□□ -0.66
RFFL-210ENST00000582308 SYTL5Q8TDW5 730 aaPredicted RBP10.92□□□□□ -0.66
RFFL-210ENST00000582308 PURBQ96QR8 312 aaKnown RBP10.92□□□□□ -0.66
RFFL-210ENST00000582308 MMP19Q99542 508 aa10.92□□□□□ -0.66
RFFL-210ENST00000582308 MAF1Q9H063 256 aa10.92□□□□□ -0.66
RFFL-210ENST00000582308 BRMS1Q9HCU9 246 aa10.92□□□□□ -0.66
RFFL-210ENST00000582308 WBP1LQ9NX94 342 aa10.92□□□□□ -0.66
RFFL-210ENST00000582308 SAGE1Q9NXZ1 904 aa10.92□□□□□ -0.66
RFFL-210ENST00000582308 MAP3K20Q9NYL2 800 aaKnown RBP10.92□□□□□ -0.66
RFFL-210ENST00000582308 CHMP5Q9NZZ3 219 aa10.92□□□□□ -0.66
RFFL-210ENST00000582308 ZNF236Q9UL36 1845 aa10.92□□□□□ -0.66
RFFL-210ENST00000582308 PFASO15067 1338 aa10.91□□□□□ -0.66
RFFL-210ENST00000582308 DNAJC25-GNG10A0A024R161 153 aa10.91□□□□□ -0.66
RFFL-210ENST00000582308 ECM2O94769 699 aaPredicted RBP10.91□□□□□ -0.66
RFFL-210ENST00000582308 PTPREP23469 700 aa10.91□□□□□ -0.66
RFFL-210ENST00000582308 NUCB2P80303 420 aa10.91□□□□□ -0.66
RFFL-210ENST00000582308 CAP1Q01518 475 aa10.91□□□□□ -0.66
RFFL-210ENST00000582308 CNTN2Q02246 1040 aa10.91□□□□□ -0.66
RFFL-210ENST00000582308 GPR142Q7Z601 462 aa10.91□□□□□ -0.66
RFFL-210ENST00000582308 PLEKHH3Q7Z736 793 aa10.91□□□□□ -0.66
RFFL-210ENST00000582308 NOSTRINQ8IVI9 506 aa10.91□□□□□ -0.66
RFFL-210ENST00000582308 ABRAQ8N0Z2 381 aa10.91□□□□□ -0.66
RFFL-210ENST00000582308 ANKRD35Q8N283 1001 aa10.91□□□□□ -0.66
RFFL-210ENST00000582308 PGBD1Q96JS3 809 aa10.91□□□□□ -0.66
RFFL-210ENST00000582308 TAAR1Q96RJ0 339 aa10.91□□□□□ -0.66
RFFL-210ENST00000582308 ASTN1O14525 1302 aa10.9□□□□□ -0.66
RFFL-210ENST00000582308 POTEB2H3BUK9 544 aa10.9□□□□□ -0.66
RFFL-210ENST00000582308 GPR25O00155 361 aa10.9□□□□□ -0.66
RFFL-210ENST00000582308 STRNO43815 780 aa10.9□□□□□ -0.66
RFFL-210ENST00000582308 EDIL3O43854 480 aa10.9□□□□□ -0.66
RFFL-210ENST00000582308 COBLO75128 1261 aa10.9□□□□□ -0.66
RFFL-210ENST00000582308 F13A1P00488 732 aa10.9□□□□□ -0.66
RFFL-210ENST00000582308 FOSP01100 380 aaPredicted RBP10.9□□□□□ -0.66
RFFL-210ENST00000582308 PGK2P07205 417 aa10.9□□□□□ -0.66
RFFL-210ENST00000582308 ADORA2AP29274 412 aa10.9□□□□□ -0.66
RFFL-210ENST00000582308 LACTBP83111 547 aaPredicted RBP10.9□□□□□ -0.66
RFFL-210ENST00000582308 SP3Q02447 781 aa10.9□□□□□ -0.66
RFFL-210ENST00000582308 AP3B2Q13367 1082 aa10.9□□□□□ -0.66
RFFL-210ENST00000582308 GNL2Q13823 731 aaKnown RBP10.9□□□□□ -0.66
RFFL-210ENST00000582308 GRB14Q14449 540 aa10.9□□□□□ -0.66
RFFL-210ENST00000582308 KCTD2Q14681 263 aa10.9□□□□□ -0.66
RFFL-210ENST00000582308 MORN1Q5T089 497 aa10.9□□□□□ -0.66
RFFL-210ENST00000582308 FAM173BQ6P4H8 233 aa10.9□□□□□ -0.66
RFFL-210ENST00000582308 PIK3AP1Q6ZUJ8 805 aa10.9□□□□□ -0.66
RFFL-210ENST00000582308 KRT25Q7Z3Z0 450 aa10.9□□□□□ -0.66
RFFL-210ENST00000582308 FAM133AQ8N9E0 248 aa10.9□□□□□ -0.66
RFFL-210ENST00000582308 TRIM47Q96LD4 638 aa10.9□□□□□ -0.66
RFFL-210ENST00000582308 FGD4Q96M96 766 aa10.9□□□□□ -0.66
RFFL-210ENST00000582308 ANO3Q9BYT9 981 aa10.9□□□□□ -0.66
RFFL-210ENST00000582308 ARHGAP39Q9C0H5 1083 aa10.9□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms