RNA–Protein interactions for RNA: ENST00000581536.5

TOP3A-211, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 5

Gene TOP3A, Length 766 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-211ENST00000581536 CHST3Q7LGC8 479 aa11.4□□□□□ -0.58
TOP3A-211ENST00000581536 DGKHQ86XP1 1220 aa11.4□□□□□ -0.58
TOP3A-211ENST00000581536 ANKRD35Q8N283 1001 aa11.4□□□□□ -0.58
TOP3A-211ENST00000581536 ENAHQ8N8S7 591 aaPredicted RBP11.4□□□□□ -0.58
TOP3A-211ENST00000581536 RUFY2Q8WXA3 655 aa11.4□□□□□ -0.58
TOP3A-211ENST00000581536 ZSCAN10Q96SZ4 725 aaPredicted RBP11.4□□□□□ -0.58
TOP3A-211ENST00000581536 HTATIP2Q9BUP3 242 aa11.4□□□□□ -0.58
TOP3A-211ENST00000581536 DIS3Q9Y2L1 958 aaKnown RBP11.4□□□□□ -0.58
TOP3A-211ENST00000581536 SOWAHBA6NEL2 793 aa11.39□□□□□ -0.59
TOP3A-211ENST00000581536 SEPT4O43236 478 aa11.39□□□□□ -0.59
TOP3A-211ENST00000581536 SNHG28P0DPA3 235 aa11.39□□□□□ -0.59
TOP3A-211ENST00000581536 FDX1P10109 184 aa11.39□□□□□ -0.59
TOP3A-211ENST00000581536 COL6A1P12109 1028 aa11.39□□□□□ -0.59
TOP3A-211ENST00000581536 CAPN2P17655 700 aa11.39□□□□□ -0.59
TOP3A-211ENST00000581536 COPB2P35606 906 aa11.39□□□□□ -0.59
TOP3A-211ENST00000581536 ZNF543Q08ER8 600 aa11.39□□□□□ -0.59
TOP3A-211ENST00000581536 COL9A3Q14050 684 aaPredicted RBP11.39□□□□□ -0.59
TOP3A-211ENST00000581536 SYDE2Q5VT97 1194 aa11.39□□□□□ -0.59
TOP3A-211ENST00000581536 STOX1Q6ZVD7 989 aa11.39□□□□□ -0.59
TOP3A-211ENST00000581536 CENPQQ7L2Z9 268 aaPredicted RBP11.39□□□□□ -0.59
TOP3A-211ENST00000581536 CHST13Q8NET6 341 aa11.39□□□□□ -0.59
TOP3A-211ENST00000581536 ANKS1AQ92625 1134 aa11.39□□□□□ -0.59
TOP3A-211ENST00000581536 MAP4K1Q92918 833 aa11.39□□□□□ -0.59
TOP3A-211ENST00000581536 LENG1Q96BZ8 264 aaPredicted RBP11.39□□□□□ -0.59
TOP3A-211ENST00000581536 SENP6Q9GZR1 1112 aaPredicted RBP11.39□□□□□ -0.59
TOP3A-211ENST00000581536 RANBP17Q9H2T7 1088 aaKnown RBP11.39□□□□□ -0.59
TOP3A-211ENST00000581536 SENP2Q9HC62 589 aa11.39□□□□□ -0.59
TOP3A-211ENST00000581536 RNF146Q9NTX7 359 aa11.39□□□□□ -0.59
TOP3A-211ENST00000581536 E7EWF7 191 aa11.38□□□□□ -0.59
TOP3A-211ENST00000581536 SEC23AQ15436 765 aa11.38□□□□□ -0.59
TOP3A-211ENST00000581536 LRRC26Q2I0M4 334 aa11.38□□□□□ -0.59
TOP3A-211ENST00000581536 MAMDC4Q6UXC1 1216 aa11.38□□□□□ -0.59
TOP3A-211ENST00000581536 LAPTM4BQ86VI4 370 aa11.38□□□□□ -0.59
TOP3A-211ENST00000581536 IQCA1Q86XH1 822 aa11.38□□□□□ -0.59
TOP3A-211ENST00000581536 C7orf61Q8IZ16 206 aa11.38□□□□□ -0.59
TOP3A-211ENST00000581536 FAM133AQ8N9E0 248 aa11.38□□□□□ -0.59
TOP3A-211ENST00000581536 PNMA1Q8ND90 353 aa11.38□□□□□ -0.59
TOP3A-211ENST00000581536 KRT23Q9C075 422 aa11.38□□□□□ -0.59
TOP3A-211ENST00000581536 ACAD9Q9H845 621 aa11.38□□□□□ -0.59
TOP3A-211ENST00000581536 VAT1LQ9HCJ6 419 aa11.38□□□□□ -0.59
TOP3A-211ENST00000581536 A1CFQ9NQ94 594 aaKnown RBP11.38□□□□□ -0.59
TOP3A-211ENST00000581536 CCPG1Q9ULG6 757 aa11.38□□□□□ -0.59
TOP3A-211ENST00000581536 ASTN1O14525 1302 aa11.37□□□□□ -0.59
TOP3A-211ENST00000581536 TNKSO95271 1327 aa11.37□□□□□ -0.59
TOP3A-211ENST00000581536 RAD50Q92878 1312 aa11.37□□□□□ -0.59
TOP3A-211ENST00000581536 RANBP2P49792 3224 aaKnown RBP11.37□□□□□ -0.59
TOP3A-211ENST00000581536 ADCY6O43306 1168 aa11.37□□□□□ -0.59
TOP3A-211ENST00000581536 PGK1P00558 417 aa11.37□□□□□ -0.59
TOP3A-211ENST00000581536 ICAM1P05362 532 aa11.37□□□□□ -0.59
TOP3A-211ENST00000581536 SYN1P17600 705 aa11.37□□□□□ -0.59
TOP3A-211ENST00000581536 BAATQ14032 418 aaPredicted RBP11.37□□□□□ -0.59
TOP3A-211ENST00000581536 TMEM63BQ5T3F8 832 aa11.37□□□□□ -0.59
TOP3A-211ENST00000581536 CCDC144CPQ8IYA2 1237 aa11.37□□□□□ -0.59
TOP3A-211ENST00000581536 STAG2Q8N3U4 1231 aa11.37□□□□□ -0.59
TOP3A-211ENST00000581536 TBC1D5Q92609 795 aa11.37□□□□□ -0.59
TOP3A-211ENST00000581536 FERMT2Q96AC1 680 aa11.37□□□□□ -0.59
TOP3A-211ENST00000581536 LSG1Q9H089 658 aaKnown RBP11.37□□□□□ -0.59
TOP3A-211ENST00000581536 KAT14Q9H8E8 782 aa11.37□□□□□ -0.59
TOP3A-211ENST00000581536 FBXO40Q9UH90 709 aa11.37□□□□□ -0.59
TOP3A-211ENST00000581536 ZMYND8Q9ULU4 1186 aaPredicted RBP11.37□□□□□ -0.59
TOP3A-211ENST00000581536 RBM8AQ9Y5S9 174 aaKnown RBP11.37□□□□□ -0.59
TOP3A-211ENST00000581536 LAMA2P24043 3122 aaKnown RBP11.37□□□□□ -0.59
TOP3A-211ENST00000581536 NFIBO00712 420 aa11.36□□□□□ -0.59
TOP3A-211ENST00000581536 MSCO60682 206 aa11.36□□□□□ -0.59
TOP3A-211ENST00000581536 PTGS1P23219 599 aa11.36□□□□□ -0.59
TOP3A-211ENST00000581536 ADCYAP1R1P41586 468 aa11.36□□□□□ -0.59
TOP3A-211ENST00000581536 ACVR2BQ13705 512 aa11.36□□□□□ -0.59
TOP3A-211ENST00000581536 LRRC41Q15345 812 aa11.36□□□□□ -0.59
TOP3A-211ENST00000581536 TKFCQ3LXA3 575 aa11.36□□□□□ -0.59
TOP3A-211ENST00000581536 HABP4Q5JVS0 413 aaKnown RBP11.36□□□□□ -0.59
TOP3A-211ENST00000581536 NSMFQ6X4W1 530 aa11.36□□□□□ -0.59
TOP3A-211ENST00000581536 ADGRF4Q8IZF3 695 aa11.36□□□□□ -0.59
TOP3A-211ENST00000581536 ARRDC4Q8NCT1 418 aa11.36□□□□□ -0.59
TOP3A-211ENST00000581536 CLEC4DQ8WXI8 215 aa11.36□□□□□ -0.59
TOP3A-211ENST00000581536 TATDN2Q93075 761 aa11.36□□□□□ -0.59
TOP3A-211ENST00000581536 CCDC136Q96JN2 1154 aa11.36□□□□□ -0.59
TOP3A-211ENST00000581536 ESYT1Q9BSJ8 1104 aa11.36□□□□□ -0.59
TOP3A-211ENST00000581536 CNNM2Q9H8M5 875 aa11.36□□□□□ -0.59
TOP3A-211ENST00000581536 CDKN2AIPQ9NXV6 580 aaPredicted RBP11.36□□□□□ -0.59
TOP3A-211ENST00000581536 CYP39A1Q9NYL5 469 aa11.36□□□□□ -0.59
TOP3A-211ENST00000581536 NR2E3Q9Y5X4 410 aa11.36□□□□□ -0.59
TOP3A-211ENST00000581536 MYH7BA7E2Y1 1941 aa11.36□□□□□ -0.59
TOP3A-211ENST00000581536 SZT2Q5T011 3432 aa11.36□□□□□ -0.59
TOP3A-211ENST00000581536 SYNGAP1Q96PV0 1343 aa11.35□□□□□ -0.59
TOP3A-211ENST00000581536 DNM1LO00429 736 aa11.35□□□□□ -0.59
TOP3A-211ENST00000581536 ANTXR2P58335 489 aa11.35□□□□□ -0.59
TOP3A-211ENST00000581536 CCDC144BQ3MJ40 725 aa11.35□□□□□ -0.59
TOP3A-211ENST00000581536 USH1GQ495M9 461 aa11.35□□□□□ -0.59
TOP3A-211ENST00000581536 CCDC178Q5BJE1 867 aa11.35□□□□□ -0.59
TOP3A-211ENST00000581536 IFIT1BQ5T764 474 aaKnown RBP11.35□□□□□ -0.59
TOP3A-211ENST00000581536 SLC39A5Q6ZMH5 540 aa11.35□□□□□ -0.59
TOP3A-211ENST00000581536 ARMCX2Q7L311 632 aa11.35□□□□□ -0.59
TOP3A-211ENST00000581536 EEPD1Q7L9B9 569 aa11.35□□□□□ -0.59
TOP3A-211ENST00000581536 UBAC1Q9BSL1 405 aa11.35□□□□□ -0.59
TOP3A-211ENST00000581536 KATNBL1Q9H079 304 aa11.35□□□□□ -0.59
TOP3A-211ENST00000581536 PDGFCQ9NRA1 345 aa11.35□□□□□ -0.59
TOP3A-211ENST00000581536 ZHX1Q9UKY1 873 aaPredicted RBP11.35□□□□□ -0.59
TOP3A-211ENST00000581536 CNPY2Q9Y2B0 182 aa11.35□□□□□ -0.59
TOP3A-211ENST00000581536 C11orf97A0A1B0GVM6 126 aaPredicted RBP11.34□□□□□ -0.59
TOP3A-211ENST00000581536 MYADML2A6NDP7 307 aa11.34□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms