RNA–Protein interactions for RNA: ENST00000579853.5

CDK5RAP3-216, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 4

Gene CDK5RAP3, Length 714 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-216ENST00000579853 ADD3Q9UEY8 706 aaKnown RBP14.51□□□□□ -0.09
CDK5RAP3-216ENST00000579853 ZNF536O15090 1300 aa14.5□□□□□ -0.09
CDK5RAP3-216ENST00000579853 PITPNM1O00562 1244 aa14.5□□□□□ -0.09
CDK5RAP3-216ENST00000579853 TLL1O43897 1013 aa14.5□□□□□ -0.09
CDK5RAP3-216ENST00000579853 ALAS1P13196 640 aa14.5□□□□□ -0.09
CDK5RAP3-216ENST00000579853 PSMC6P62333 389 aa14.5□□□□□ -0.09
CDK5RAP3-216ENST00000579853 LRRFIP1Q32MZ4 808 aaKnown RBP14.5□□□□□ -0.09
CDK5RAP3-216ENST00000579853 FBXO16Q8IX29 292 aaPredicted RBP14.5□□□□□ -0.09
CDK5RAP3-216ENST00000579853 KBTBD3Q8NAB2 608 aa14.5□□□□□ -0.09
CDK5RAP3-216ENST00000579853 MORC4Q8TE76 937 aa14.5□□□□□ -0.09
CDK5RAP3-216ENST00000579853 VWCEQ96DN2 955 aa14.5□□□□□ -0.09
CDK5RAP3-216ENST00000579853 NACAP1Q9BZK3 213 aa14.5□□□□□ -0.09
CDK5RAP3-216ENST00000579853 LRRCC1Q9C099 1032 aa14.5□□□□□ -0.09
CDK5RAP3-216ENST00000579853 PDGFCQ9NRA1 345 aa14.5□□□□□ -0.09
CDK5RAP3-216ENST00000579853 CYP39A1Q9NYL5 469 aa14.5□□□□□ -0.09
CDK5RAP3-216ENST00000579853 WDFY4Q6ZS81 3184 aa14.49□□□□□ -0.09
CDK5RAP3-216ENST00000579853 RAD50Q92878 1312 aa14.49□□□□□ -0.09
CDK5RAP3-216ENST00000579853 GPR37L1O60883 481 aa14.49□□□□□ -0.09
CDK5RAP3-216ENST00000579853 PRDM1O75626 825 aa14.49□□□□□ -0.09
CDK5RAP3-216ENST00000579853 APPP05067 770 aa14.49□□□□□ -0.09
CDK5RAP3-216ENST00000579853 EEPD1Q7L9B9 569 aa14.49□□□□□ -0.09
CDK5RAP3-216ENST00000579853 DEFB128Q7Z7B8 93 aa14.49□□□□□ -0.09
CDK5RAP3-216ENST00000579853 SIRT2Q8IXJ6 389 aa14.49□□□□□ -0.09
CDK5RAP3-216ENST00000579853 RETREG2Q8NC44 543 aa14.49□□□□□ -0.09
CDK5RAP3-216ENST00000579853 OSBP2Q969R2 916 aa14.49□□□□□ -0.09
CDK5RAP3-216ENST00000579853 EPHX3Q9H6B9 360 aa14.49□□□□□ -0.09
CDK5RAP3-216ENST00000579853 ZBTB40Q9NUA8 1239 aa14.49□□□□□ -0.09
CDK5RAP3-216ENST00000579853 TRMT13Q9NUP7 481 aaKnown RBP14.49□□□□□ -0.09
CDK5RAP3-216ENST00000579853 LMCD1Q9NZU5 365 aa14.49□□□□□ -0.09
CDK5RAP3-216ENST00000579853 RFXAPO00287 272 aa14.48□□□□□ -0.09
CDK5RAP3-216ENST00000579853 RNF113AO15541 343 aaKnown RBP14.48□□□□□ -0.09
CDK5RAP3-216ENST00000579853 GPAA1O43292 621 aa14.48□□□□□ -0.09
CDK5RAP3-216ENST00000579853 KPNA6O60684 536 aa14.48□□□□□ -0.09
CDK5RAP3-216ENST00000579853 BAIAP3O94812 1187 aa14.48□□□□□ -0.09
CDK5RAP3-216ENST00000579853 CYP2C9P11712 490 aa14.48□□□□□ -0.09
CDK5RAP3-216ENST00000579853 PURAQ00577 322 aaKnown RBP14.48□□□□□ -0.09
CDK5RAP3-216ENST00000579853 TAP1Q03518 808 aa14.48□□□□□ -0.09
CDK5RAP3-216ENST00000579853 PTPN11Q06124 597 aaPredicted RBP14.48□□□□□ -0.09
CDK5RAP3-216ENST00000579853 BFSP2Q13515 415 aa14.48□□□□□ -0.09
CDK5RAP3-216ENST00000579853 RCSD1Q6JBY9 416 aa14.48□□□□□ -0.09
CDK5RAP3-216ENST00000579853 ARNTL2Q8WYA1 636 aa14.48□□□□□ -0.09
CDK5RAP3-216ENST00000579853 GPATCH3Q96I76 525 aa14.48□□□□□ -0.09
CDK5RAP3-216ENST00000579853 MPHOSPH6Q99547 160 aaKnown RBP14.48□□□□□ -0.09
CDK5RAP3-216ENST00000579853 MTG1Q9BT17 334 aaPredicted RBP14.48□□□□□ -0.09
CDK5RAP3-216ENST00000579853 WDR11Q9BZH6 1224 aa14.48□□□□□ -0.09
CDK5RAP3-216ENST00000579853 ECHDC1Q9NTX5 307 aa14.48□□□□□ -0.09
CDK5RAP3-216ENST00000579853 LRRC37A2A6NM11 1700 aa14.48□□□□□ -0.09
CDK5RAP3-216ENST00000579853 SCN10AQ9Y5Y9 1956 aa14.47□□□□□ -0.09
CDK5RAP3-216ENST00000579853 PATL2C9JE40 543 aaKnown RBP14.47□□□□□ -0.09
CDK5RAP3-216ENST00000579853 NKRFO15226 690 aaKnown RBP eCLIP14.47□□□□□ -0.09
CDK5RAP3-216ENST00000579853 MCCP23508 829 aa14.47□□□□□ -0.09
CDK5RAP3-216ENST00000579853 TFAP4Q01664 338 aa14.47□□□□□ -0.09
CDK5RAP3-216ENST00000579853 NFRKBQ6P4R8 1299 aa14.47□□□□□ -0.09
CDK5RAP3-216ENST00000579853 NSMFQ6X4W1 530 aa14.47□□□□□ -0.09
CDK5RAP3-216ENST00000579853 HERC6Q8IVU3 1022 aa14.47□□□□□ -0.09
CDK5RAP3-216ENST00000579853 IFNL3Q8IZI9 196 aa14.47□□□□□ -0.09
CDK5RAP3-216ENST00000579853 FTOQ9C0B1 505 aaKnown RBP eCLIP14.47□□□□□ -0.09
CDK5RAP3-216ENST00000579853 CERS4Q9HA82 394 aa14.47□□□□□ -0.09
CDK5RAP3-216ENST00000579853 EPB41L4AQ9HCS5 686 aaPredicted RBP14.47□□□□□ -0.09
CDK5RAP3-216ENST00000579853 CCPG1Q9ULG6 757 aa14.47□□□□□ -0.09
CDK5RAP3-216ENST00000579853 SCN5AQ14524 2016 aa14.46□□□□□ -0.09
CDK5RAP3-216ENST00000579853 RBM47A0AV96 593 aaKnown RBP14.46□□□□□ -0.09
CDK5RAP3-216ENST00000579853 ICAM1P05362 532 aa14.46□□□□□ -0.09
CDK5RAP3-216ENST00000579853 MYL3P08590 195 aa14.46□□□□□ -0.09
CDK5RAP3-216ENST00000579853 IQCF3P0C7M6 154 aa14.46□□□□□ -0.09
CDK5RAP3-216ENST00000579853 KCNJ6P48051 423 aa14.46□□□□□ -0.09
CDK5RAP3-216ENST00000579853 MUM1L1Q5H9M0 696 aa14.46□□□□□ -0.09
CDK5RAP3-216ENST00000579853 FAM47CQ5HY64 1035 aa14.46□□□□□ -0.09
CDK5RAP3-216ENST00000579853 CCDC155Q8N6L0 562 aa14.46□□□□□ -0.09
CDK5RAP3-216ENST00000579853 PNMA2Q9UL42 364 aa14.46□□□□□ -0.09
CDK5RAP3-216ENST00000579853 PRR12Q9ULL5 1215 aa14.46□□□□□ -0.09
CDK5RAP3-216ENST00000579853 STX8Q9UNK0 236 aa14.46□□□□□ -0.09
CDK5RAP3-216ENST00000579853 NOD1Q9Y239 953 aa14.46□□□□□ -0.09
CDK5RAP3-216ENST00000579853 TET1Q8NFU7 2136 aa14.45□□□□□ -0.1
CDK5RAP3-216ENST00000579853 PARNO95453 639 aaKnown RBP14.45□□□□□ -0.1
CDK5RAP3-216ENST00000579853 ALDH5A1P51649 535 aaPredicted RBP14.45□□□□□ -0.1
CDK5RAP3-216ENST00000579853 HNRNPUQ00839 825 aaKnown RBP eCLIP14.45□□□□□ -0.1
CDK5RAP3-216ENST00000579853 GRB10Q13322 594 aa14.45□□□□□ -0.1
CDK5RAP3-216ENST00000579853 NBPF20Q3BBV1 942 aa14.45□□□□□ -0.1
CDK5RAP3-216ENST00000579853 KCTD1Q719H9 257 aa14.45□□□□□ -0.1
CDK5RAP3-216ENST00000579853 OR6J1Q8NGC5 347 aa14.45□□□□□ -0.1
CDK5RAP3-216ENST00000579853 EPOPA6NHQ4 379 aa14.44□□□□□ -0.1
CDK5RAP3-216ENST00000579853 B4DLN1 442 aa14.44□□□□□ -0.1
CDK5RAP3-216ENST00000579853 PTGS1P23219 599 aa14.44□□□□□ -0.1
CDK5RAP3-216ENST00000579853 MRPL12P52815 198 aaKnown RBP14.44□□□□□ -0.1
CDK5RAP3-216ENST00000579853 BAATQ14032 418 aaPredicted RBP14.44□□□□□ -0.1
CDK5RAP3-216ENST00000579853 PPP2R5BQ15173 497 aa14.44□□□□□ -0.1
CDK5RAP3-216ENST00000579853 TMEM63BQ5T3F8 832 aa14.44□□□□□ -0.1
CDK5RAP3-216ENST00000579853 CAGE1Q8TC20 777 aa14.44□□□□□ -0.1
CDK5RAP3-216ENST00000579853 SCFD2Q8WU76 684 aa14.44□□□□□ -0.1
CDK5RAP3-216ENST00000579853 NAPBQ9H115 298 aa14.44□□□□□ -0.1
CDK5RAP3-216ENST00000579853 DDX49Q9Y6V7 483 aaKnown RBP14.44□□□□□ -0.1
CDK5RAP3-216ENST00000579853 TANC1Q9C0D5 1861 aa14.44□□□□□ -0.1
CDK5RAP3-216ENST00000579853 A6NJR5 290 aa14.43□□□□□ -0.1
CDK5RAP3-216ENST00000579853 TSPY2A6NKD2 308 aa14.43□□□□□ -0.1
CDK5RAP3-216ENST00000579853 PI4K2BG5E9Z4 385 aa14.43□□□□□ -0.1
CDK5RAP3-216ENST00000579853 PPARAQ07869 468 aa14.43□□□□□ -0.1
CDK5RAP3-216ENST00000579853 KRT40Q6A162 431 aa14.43□□□□□ -0.1
CDK5RAP3-216ENST00000579853 AFAP1L1Q8TED9 768 aa14.43□□□□□ -0.1
CDK5RAP3-216ENST00000579853 DCAF4Q8WV16 495 aa14.43□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 93.8 ms