RNA–Protein interactions for RNA: ENST00000578780.2

RTTN-202, Transcript of rotatin, humanhuman

TSL 5 BASIC

Gene RTTN, Length 2,333 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTTN-202ENST00000578780 DLGAP5Q15398 846 aa11.26□□□□□ -0.61
RTTN-202ENST00000578780 SLC35G1Q2M3R5 365 aa11.26□□□□□ -0.61
RTTN-202ENST00000578780 PREPLQ4J6C6 727 aaPredicted RBP11.26□□□□□ -0.61
RTTN-202ENST00000578780 ISM2Q6H9L7 571 aa11.26□□□□□ -0.61
RTTN-202ENST00000578780 HOMER1Q86YM7 354 aa11.26□□□□□ -0.61
RTTN-202ENST00000578780 CLEC10AQ8IUN9 316 aa11.26□□□□□ -0.61
RTTN-202ENST00000578780 LRRC47Q8N1G4 583 aaKnown RBP11.26□□□□□ -0.61
RTTN-202ENST00000578780 ENGASEQ8NFI3 743 aa11.26□□□□□ -0.61
RTTN-202ENST00000578780 CCDC17Q96LX7 622 aa11.26□□□□□ -0.61
RTTN-202ENST00000578780 TAOK3Q9H2K8 898 aa11.26□□□□□ -0.61
RTTN-202ENST00000578780 DNAJC18Q9H819 358 aa11.26□□□□□ -0.61
RTTN-202ENST00000578780 CD248Q9HCU0 757 aa11.26□□□□□ -0.61
RTTN-202ENST00000578780 GOLGB1Q14789 3259 aaKnown RBP11.26□□□□□ -0.61
RTTN-202ENST00000578780 CCDC151A5D8V7 595 aa11.26□□□□□ -0.61
RTTN-202ENST00000578780 SPDYE2BA6NHP3 402 aa11.26□□□□□ -0.61
RTTN-202ENST00000578780 USP17L5A8MUK1 530 aa11.26□□□□□ -0.61
RTTN-202ENST00000578780 KINO60870 393 aaKnown RBP11.26□□□□□ -0.61
RTTN-202ENST00000578780 ENTPD3O75355 529 aa11.26□□□□□ -0.61
RTTN-202ENST00000578780 SPDYE6P0CI01 402 aa11.26□□□□□ -0.61
RTTN-202ENST00000578780 SETQ01105 290 aaPredicted RBP11.26□□□□□ -0.61
RTTN-202ENST00000578780 NPY5RQ15761 445 aa11.26□□□□□ -0.61
RTTN-202ENST00000578780 SKIDA1Q1XH10 827 aa11.26□□□□□ -0.61
RTTN-202ENST00000578780 BEND6Q5SZJ8 279 aaPredicted RBP11.26□□□□□ -0.61
RTTN-202ENST00000578780 AP1ARQ63HQ0 302 aa11.26□□□□□ -0.61
RTTN-202ENST00000578780 FOXP4Q8IVH2 680 aaPredicted RBP11.26□□□□□ -0.61
RTTN-202ENST00000578780 MSL3Q8N5Y2 521 aaKnown RBP11.26□□□□□ -0.61
RTTN-202ENST00000578780 CCDC26Q8TAB7 109 aa11.26□□□□□ -0.61
RTTN-202ENST00000578780 GPKOWQ92917 476 aaPredicted RBP eCLIP11.26□□□□□ -0.61
RTTN-202ENST00000578780 NUCKS1Q9H1E3 243 aaKnown RBP11.26□□□□□ -0.61
RTTN-202ENST00000578780 CPVLQ9H3G5 476 aa11.26□□□□□ -0.61
RTTN-202ENST00000578780 FAM205CA6NFA0 338 aa11.25□□□□□ -0.61
RTTN-202ENST00000578780 PDHBP11177 359 aa11.25□□□□□ -0.61
RTTN-202ENST00000578780 KCNJ6P48051 423 aa11.25□□□□□ -0.61
RTTN-202ENST00000578780 NDUFA8P51970 172 aa11.25□□□□□ -0.61
RTTN-202ENST00000578780 GSDMDP57764 484 aa11.25□□□□□ -0.61
RTTN-202ENST00000578780 CXCL9Q07325 125 aa11.25□□□□□ -0.61
RTTN-202ENST00000578780 CERKLQ49MI3 558 aaPredicted RBP11.25□□□□□ -0.61
RTTN-202ENST00000578780 EARS2Q5JPH6 523 aaKnown RBP11.25□□□□□ -0.61
RTTN-202ENST00000578780 JDP2Q8WYK2 163 aa11.25□□□□□ -0.61
RTTN-202ENST00000578780 RABGGTAQ92696 567 aa11.25□□□□□ -0.61
RTTN-202ENST00000578780 THOC1Q96FV9 657 aaKnown RBP11.25□□□□□ -0.61
RTTN-202ENST00000578780 SGIP1Q9BQI5 828 aa11.25□□□□□ -0.61
RTTN-202ENST00000578780 SPZ1Q9BXG8 430 aa11.25□□□□□ -0.61
RTTN-202ENST00000578780 EIF4ENIF1Q9NRA8 985 aaKnown RBP11.25□□□□□ -0.61
RTTN-202ENST00000578780 TMOD2Q9NZR1 351 aa11.25□□□□□ -0.61
RTTN-202ENST00000578780 BCS1LQ9Y276 419 aa11.25□□□□□ -0.61
RTTN-202ENST00000578780 PCDHB6Q9Y5E3 794 aa11.25□□□□□ -0.61
RTTN-202ENST00000578780 CD2APQ9Y5K6 639 aa11.25□□□□□ -0.61
RTTN-202ENST00000578780 FAM169AQ9Y6X4 670 aa11.25□□□□□ -0.61
RTTN-202ENST00000578780 PSME4Q14997 1843 aa11.25□□□□□ -0.61
RTTN-202ENST00000578780 CLRN2A0PK11 232 aa11.25□□□□□ -0.61
RTTN-202ENST00000578780 TCP10L2B9ZVM9 353 aa11.25□□□□□ -0.61
RTTN-202ENST00000578780 GOLGA6L19H0YKK7 550 aa11.25□□□□□ -0.61
RTTN-202ENST00000578780 COQ9O75208 318 aa11.25□□□□□ -0.61
RTTN-202ENST00000578780 CMA1P23946 247 aa11.25□□□□□ -0.61
RTTN-202ENST00000578780 NF2P35240 595 aa11.25□□□□□ -0.61
RTTN-202ENST00000578780 MRPL12P52815 198 aaKnown RBP11.25□□□□□ -0.61
RTTN-202ENST00000578780 ATP2B2Q01814 1243 aa11.25□□□□□ -0.61
RTTN-202ENST00000578780 BRD3Q15059 726 aa11.25□□□□□ -0.61
RTTN-202ENST00000578780 ARMCX5Q6P1M9 558 aa11.25□□□□□ -0.61
RTTN-202ENST00000578780 FMR1NBQ8N0W7 255 aaPredicted RBP11.25□□□□□ -0.61
RTTN-202ENST00000578780 UPF1Q92900 1129 aaKnown RBP eCLIP11.25□□□□□ -0.61
RTTN-202ENST00000578780 CABS1Q96KC9 395 aa11.25□□□□□ -0.61
RTTN-202ENST00000578780 SH3GLB2Q9NR46 395 aa11.25□□□□□ -0.61
RTTN-202ENST00000578780 FRMPD2Q68DX3 1309 aaPredicted RBP11.25□□□□□ -0.61
RTTN-202ENST00000578780 NFKBIEO00221 500 aa11.24□□□□□ -0.61
RTTN-202ENST00000578780 CALML3P27482 149 aa11.24□□□□□ -0.61
RTTN-202ENST00000578780 C11orf57Q6ZUT1 292 aaPredicted RBP11.24□□□□□ -0.61
RTTN-202ENST00000578780 HDXQ7Z353 690 aa11.24□□□□□ -0.61
RTTN-202ENST00000578780 HEATR3Q7Z4Q2 680 aa11.24□□□□□ -0.61
RTTN-202ENST00000578780 AGBL3Q8NEM8 1001 aa11.24□□□□□ -0.61
RTTN-202ENST00000578780 HNRNPLLQ8WVV9 542 aaKnown RBP11.24□□□□□ -0.61
RTTN-202ENST00000578780 TNFRSF25Q93038 417 aa11.24□□□□□ -0.61
RTTN-202ENST00000578780 BAG1Q99933 345 aaPredicted RBP11.24□□□□□ -0.61
RTTN-202ENST00000578780 SH3GL3Q99963 347 aa11.24□□□□□ -0.61
RTTN-202ENST00000578780 VAT1LQ9HCJ6 419 aa11.24□□□□□ -0.61
RTTN-202ENST00000578780 ZNF70Q9UC06 446 aaPredicted RBP11.24□□□□□ -0.61
RTTN-202ENST00000578780 ODF2LQ9ULJ1 636 aa11.24□□□□□ -0.61
RTTN-202ENST00000578780 ATRNL1Q5VV63 1379 aa11.24□□□□□ -0.61
RTTN-202ENST00000578780 SMARCA1P28370 1054 aa11.24□□□□□ -0.61
RTTN-202ENST00000578780 MAP3K9P80192 1104 aa11.24□□□□□ -0.61
RTTN-202ENST00000578780 DHX8Q14562 1220 aaKnown RBP11.24□□□□□ -0.61
RTTN-202ENST00000578780 WLSQ5T9L3 541 aa11.24□□□□□ -0.61
RTTN-202ENST00000578780 WWC2Q6AWC2 1192 aa11.24□□□□□ -0.61
RTTN-202ENST00000578780 CIAPIN1Q6FI81 312 aa11.24□□□□□ -0.61
RTTN-202ENST00000578780 TATDN1Q6P1N9 297 aa11.24□□□□□ -0.61
RTTN-202ENST00000578780 CSRNP1Q96S65 589 aa11.24□□□□□ -0.61
RTTN-202ENST00000578780 UBA5Q9GZZ9 404 aa11.24□□□□□ -0.61
RTTN-202ENST00000578780 CEP131Q9UPN4 1083 aa11.24□□□□□ -0.61
RTTN-202ENST00000578780 BAZ2BQ9UIF8 2168 aaKnown RBP11.23□□□□□ -0.61
RTTN-202ENST00000578780 TRIM75PA6NK02 468 aa11.23□□□□□ -0.61
RTTN-202ENST00000578780 CHUKO15111 745 aa11.23□□□□□ -0.61
RTTN-202ENST00000578780 CUTAO60888 179 aa11.23□□□□□ -0.61
RTTN-202ENST00000578780 PHACTR2O75167 634 aa11.23□□□□□ -0.61
RTTN-202ENST00000578780 AP1G2O75843 785 aa11.23□□□□□ -0.61
RTTN-202ENST00000578780 CAVIN2O95810 425 aa11.23□□□□□ -0.61
RTTN-202ENST00000578780 SNHG28P0DPA3 235 aa11.23□□□□□ -0.61
RTTN-202ENST00000578780 PFKFB1P16118 471 aa11.23□□□□□ -0.61
RTTN-202ENST00000578780 TXLNAP40222 546 aa11.23□□□□□ -0.61
RTTN-202ENST00000578780 PTGER2P43116 358 aa11.23□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms