RNA–Protein interactions for RNA: ENST00000578547.1

IFT20-207, Transcript of intraflagellar transport 20, humanhuman

TSL 1 (best)

Gene IFT20, Length 962 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT20-207ENST00000578547 PDCP20941 246 aa13.93□□□□□ -0.18
IFT20-207ENST00000578547 CALML3P27482 149 aa13.93□□□□□ -0.18
IFT20-207ENST00000578547 MRPL12P52815 198 aaKnown RBP13.93□□□□□ -0.18
IFT20-207ENST00000578547 FCGRTP55899 365 aa13.93□□□□□ -0.18
IFT20-207ENST00000578547 KCTD2Q14681 263 aa13.93□□□□□ -0.18
IFT20-207ENST00000578547 RNF207Q6ZRF8 634 aa13.93□□□□□ -0.18
IFT20-207ENST00000578547 PLEKHH3Q7Z736 793 aa13.93□□□□□ -0.18
IFT20-207ENST00000578547 FCHSD1Q86WN1 690 aa13.93□□□□□ -0.18
IFT20-207ENST00000578547 TBC1D5Q92609 795 aa13.93□□□□□ -0.18
IFT20-207ENST00000578547 IPO9Q96P70 1041 aaKnown RBP13.93□□□□□ -0.18
IFT20-207ENST00000578547 ZMYND12Q9H0C1 365 aa13.93□□□□□ -0.18
IFT20-207ENST00000578547 RIC8AQ9NPQ8 531 aa13.93□□□□□ -0.18
IFT20-207ENST00000578547 A1CFQ9NQ94 594 aaKnown RBP13.93□□□□□ -0.18
IFT20-207ENST00000578547 PFASO15067 1338 aa13.92□□□□□ -0.18
IFT20-207ENST00000578547 ADAMTS3O15072 1205 aa13.92□□□□□ -0.18
IFT20-207ENST00000578547 MMP1P03956 469 aa13.92□□□□□ -0.18
IFT20-207ENST00000578547 PGK2P07205 417 aa13.92□□□□□ -0.18
IFT20-207ENST00000578547 SYT1P21579 422 aa13.92□□□□□ -0.18
IFT20-207ENST00000578547 GNA11P29992 359 aa13.92□□□□□ -0.18
IFT20-207ENST00000578547 KRT2P35908 639 aa13.92□□□□□ -0.18
IFT20-207ENST00000578547 GNL2Q13823 731 aaKnown RBP13.92□□□□□ -0.18
IFT20-207ENST00000578547 BAATQ14032 418 aaPredicted RBP13.92□□□□□ -0.18
IFT20-207ENST00000578547 SAFBQ15424 915 aaKnown RBP eCLIP13.92□□□□□ -0.18
IFT20-207ENST00000578547 MCTP1Q6DN14 999 aa13.92□□□□□ -0.18
IFT20-207ENST00000578547 USP17L6PQ6QN14 398 aa13.92□□□□□ -0.18
IFT20-207ENST00000578547 REXO1Q8N1G1 1221 aaKnown RBP13.92□□□□□ -0.18
IFT20-207ENST00000578547 FBXO18Q8NFZ0 1043 aa13.92□□□□□ -0.18
IFT20-207ENST00000578547 BICD2Q8TD16 824 aa13.92□□□□□ -0.18
IFT20-207ENST00000578547 RASGRP4Q8TDF6 673 aa13.92□□□□□ -0.18
IFT20-207ENST00000578547 OXER1Q8TDS5 423 aa13.92□□□□□ -0.18
IFT20-207ENST00000578547 BRMS1Q9HCU9 246 aa13.92□□□□□ -0.18
IFT20-207ENST00000578547 TMEM260Q9NX78 707 aa13.92□□□□□ -0.18
IFT20-207ENST00000578547 CYP39A1Q9NYL5 469 aa13.92□□□□□ -0.18
IFT20-207ENST00000578547 BIN2Q9UBW5 565 aaPredicted RBP13.92□□□□□ -0.18
IFT20-207ENST00000578547 GJD2Q9UKL4 321 aa13.92□□□□□ -0.18
IFT20-207ENST00000578547 PCDHA4Q9UN74 947 aa13.92□□□□□ -0.18
IFT20-207ENST00000578547 CASP8AP2Q9UKL3 1982 aa13.91□□□□□ -0.18
IFT20-207ENST00000578547 SLC15A5A6NIM6 579 aa13.91□□□□□ -0.18
IFT20-207ENST00000578547 STRNO43815 780 aa13.91□□□□□ -0.18
IFT20-207ENST00000578547 PTPREP23469 700 aa13.91□□□□□ -0.18
IFT20-207ENST00000578547 ADORA2AP29274 412 aa13.91□□□□□ -0.18
IFT20-207ENST00000578547 HSD17B4P51659 736 aa13.91□□□□□ -0.18
IFT20-207ENST00000578547 RPS6P62753 249 aaKnown RBP13.91□□□□□ -0.18
IFT20-207ENST00000578547 NPY5RQ15761 445 aa13.91□□□□□ -0.18
IFT20-207ENST00000578547 MORN1Q5T089 497 aa13.91□□□□□ -0.18
IFT20-207ENST00000578547 FOXD4L5Q5VV16 416 aaPredicted RBP13.91□□□□□ -0.18
IFT20-207ENST00000578547 JAKMIP3Q5VZ66 844 aa13.91□□□□□ -0.18
IFT20-207ENST00000578547 DHX30Q7L2E3 1194 aaKnown RBP eCLIP13.91□□□□□ -0.18
IFT20-207ENST00000578547 DIS3L2Q8IYB7 885 aaKnown RBP13.91□□□□□ -0.18
IFT20-207ENST00000578547 BLIDQ8IZY5 108 aa13.91□□□□□ -0.18
IFT20-207ENST00000578547 FAM177A1Q8N128 213 aaPredicted RBP13.91□□□□□ -0.18
IFT20-207ENST00000578547 FOXD4L4Q8WXT5 416 aaPredicted RBP13.91□□□□□ -0.18
IFT20-207ENST00000578547 PGBD1Q96JS3 809 aa13.91□□□□□ -0.18
IFT20-207ENST00000578547 PURBQ96QR8 312 aaKnown RBP13.91□□□□□ -0.18
IFT20-207ENST00000578547 GLT8D2Q9H1C3 349 aa13.91□□□□□ -0.18
IFT20-207ENST00000578547 GABRQQ9UN88 632 aa13.91□□□□□ -0.18
IFT20-207ENST00000578547 MGAMO43451 1857 aa13.91□□□□□ -0.18
IFT20-207ENST00000578547 BTBD18B2RXH4 712 aa13.9□□□□□ -0.18
IFT20-207ENST00000578547 POTEB2H3BUK9 544 aa13.9□□□□□ -0.18
IFT20-207ENST00000578547 MEIS2O14770 477 aa13.9□□□□□ -0.18
IFT20-207ENST00000578547 STX6O43752 255 aa13.9□□□□□ -0.18
IFT20-207ENST00000578547 CNTN2Q02246 1040 aa13.9□□□□□ -0.18
IFT20-207ENST00000578547 NR5A1Q13285 461 aa13.9□□□□□ -0.18
IFT20-207ENST00000578547 GRB14Q14449 540 aa13.9□□□□□ -0.18
IFT20-207ENST00000578547 ARHGEF6Q15052 776 aa13.9□□□□□ -0.18
IFT20-207ENST00000578547 GALNT17Q6IS24 598 aa13.9□□□□□ -0.18
IFT20-207ENST00000578547 OTOP1Q7RTM1 612 aa13.9□□□□□ -0.18
IFT20-207ENST00000578547 ABRAQ8N0Z2 381 aa13.9□□□□□ -0.18
IFT20-207ENST00000578547 DAGLBQ8NCG7 672 aa13.9□□□□□ -0.18
IFT20-207ENST00000578547 RGS22Q8NE09 1264 aa13.9□□□□□ -0.18
IFT20-207ENST00000578547 SYTL5Q8TDW5 730 aaPredicted RBP13.9□□□□□ -0.18
IFT20-207ENST00000578547 USP6NLQ92738 828 aa13.9□□□□□ -0.18
IFT20-207ENST00000578547 COL20A1Q9P218 1284 aa13.9□□□□□ -0.18
IFT20-207ENST00000578547 SRRDQ9UH36 339 aa13.9□□□□□ -0.18
IFT20-207ENST00000578547 TRIM17Q9Y577 477 aa13.9□□□□□ -0.18
IFT20-207ENST00000578547 SPDYE3A6NKU9 549 aa13.89□□□□□ -0.19
IFT20-207ENST00000578547 PIK3CDO00329 1044 aa13.89□□□□□ -0.19
IFT20-207ENST00000578547 COBLO75128 1261 aa13.89□□□□□ -0.19
IFT20-207ENST00000578547 GNRH1P01148 92 aa13.89□□□□□ -0.19
IFT20-207ENST00000578547 HOXD10P28358 340 aa13.89□□□□□ -0.19
IFT20-207ENST00000578547 PRKCZQ05513 592 aa13.89□□□□□ -0.19
IFT20-207ENST00000578547 MAP2K5Q13163 448 aa13.89□□□□□ -0.19
IFT20-207ENST00000578547 PKP1Q13835 747 aa13.89□□□□□ -0.19
IFT20-207ENST00000578547 DPP9Q86TI2 863 aa13.89□□□□□ -0.19
IFT20-207ENST00000578547 FERMT3Q86UX7 667 aa13.89□□□□□ -0.19
IFT20-207ENST00000578547 NUDT12Q9BQG2 462 aa13.89□□□□□ -0.19
IFT20-207ENST00000578547 PRDM10Q9NQV6 1147 aa13.89□□□□□ -0.19
IFT20-207ENST00000578547 PCDHA6Q9UN73 950 aa13.89□□□□□ -0.19
IFT20-207ENST00000578547 MTMR6Q9Y217 621 aa13.89□□□□□ -0.19
IFT20-207ENST00000578547 PCDHA8Q9Y5H6 950 aa13.89□□□□□ -0.19
IFT20-207ENST00000578547 DOCK3Q8IZD9 2030 aa13.89□□□□□ -0.19
IFT20-207ENST00000578547 ZNF236Q9UL36 1845 aa13.89□□□□□ -0.19
IFT20-207ENST00000578547 LCTP09848 1927 aa13.88□□□□□ -0.19
IFT20-207ENST00000578547 CCDC194A0A1B0GVG4 234 aa13.88□□□□□ -0.19
IFT20-207ENST00000578547 KIF28PB7ZC32 967 aa13.88□□□□□ -0.19
IFT20-207ENST00000578547 EIF2AK2P19525 551 aaKnown RBP13.88□□□□□ -0.19
IFT20-207ENST00000578547 CYP2B6P20813 491 aa13.88□□□□□ -0.19
IFT20-207ENST00000578547 CLK2P49760 499 aaKnown RBP13.88□□□□□ -0.19
IFT20-207ENST00000578547 FLT3LGP49771 235 aa13.88□□□□□ -0.19
IFT20-207ENST00000578547 UBXN2AP68543 259 aa13.88□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms