RNA–Protein interactions for RNA: ENST00000578525.5

CDK5RAP3-208, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 4

Gene CDK5RAP3, Length 564 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-208ENST00000578525 ERVK-24P63145 666 aa10.47□□□□□ -0.73
CDK5RAP3-208ENST00000578525 MAP3K9P80192 1104 aa10.47□□□□□ -0.73
CDK5RAP3-208ENST00000578525 HDLBPQ00341 1268 aaKnown RBP10.47□□□□□ -0.73
CDK5RAP3-208ENST00000578525 ERCC6LQ2NKX8 1250 aa10.47□□□□□ -0.73
CDK5RAP3-208ENST00000578525 CNNM4Q6P4Q7 775 aa10.47□□□□□ -0.73
CDK5RAP3-208ENST00000578525 FBXO38Q6PIJ6 1188 aa10.47□□□□□ -0.73
CDK5RAP3-208ENST00000578525 CYP26C1Q6V0L0 522 aa10.47□□□□□ -0.73
CDK5RAP3-208ENST00000578525 SV2BQ7L1I2 683 aa10.47□□□□□ -0.73
CDK5RAP3-208ENST00000578525 ADGRF4Q8IZF3 695 aa10.47□□□□□ -0.73
CDK5RAP3-208ENST00000578525 ZNF507Q8TCN5 953 aa10.47□□□□□ -0.73
CDK5RAP3-208ENST00000578525 DCAF4Q8WV16 495 aa10.47□□□□□ -0.73
CDK5RAP3-208ENST00000578525 MTMR8Q96EF0 704 aa10.47□□□□□ -0.73
CDK5RAP3-208ENST00000578525 CDK5RAP3Q96JB5 506 aa10.47□□□□□ -0.73
CDK5RAP3-208ENST00000578525 ZDHHC15Q96MV8 337 aa10.47□□□□□ -0.73
CDK5RAP3-208ENST00000578525 PNMA5Q96PV4 448 aa10.47□□□□□ -0.73
CDK5RAP3-208ENST00000578525 NUP88Q99567 741 aaPredicted RBP10.47□□□□□ -0.73
CDK5RAP3-208ENST00000578525 DUSP9Q99956 384 aaKnown RBP10.47□□□□□ -0.73
CDK5RAP3-208ENST00000578525 MRIQ9BWK5 157 aa10.47□□□□□ -0.73
CDK5RAP3-208ENST00000578525 RAB34Q9BZG1 259 aa10.47□□□□□ -0.73
CDK5RAP3-208ENST00000578525 LRRC27Q9C0I9 530 aa10.47□□□□□ -0.73
CDK5RAP3-208ENST00000578525 LRWD1Q9UFC0 647 aa10.47□□□□□ -0.73
CDK5RAP3-208ENST00000578525 DDX41Q9UJV9 622 aaKnown RBP10.47□□□□□ -0.73
CDK5RAP3-208ENST00000578525 MRFAP1Q9Y605 127 aa10.47□□□□□ -0.73
CDK5RAP3-208ENST00000578525 ZNF646O15015 1829 aaPredicted RBP10.47□□□□□ -0.73
CDK5RAP3-208ENST00000578525 PVALEFA0A1B0GWK0 134 aa10.46□□□□□ -0.73
CDK5RAP3-208ENST00000578525 EFCAB8A8MWE9 144 aa10.46□□□□□ -0.73
CDK5RAP3-208ENST00000578525 ZBTB5O15062 677 aa10.46□□□□□ -0.73
CDK5RAP3-208ENST00000578525 PLSCR1O15162 318 aa10.46□□□□□ -0.73
CDK5RAP3-208ENST00000578525 SLC26A4O43511 780 aa10.46□□□□□ -0.73
CDK5RAP3-208ENST00000578525 SLC37A4O43826 429 aa10.46□□□□□ -0.73
CDK5RAP3-208ENST00000578525 EDIL3O43854 480 aa10.46□□□□□ -0.73
CDK5RAP3-208ENST00000578525 KIF5CO60282 957 aa10.46□□□□□ -0.73
CDK5RAP3-208ENST00000578525 PPP1R11O60927 126 aaPredicted RBP10.46□□□□□ -0.73
CDK5RAP3-208ENST00000578525 TDP2O95551 362 aa10.46□□□□□ -0.73
CDK5RAP3-208ENST00000578525 MMP10P09238 476 aa10.46□□□□□ -0.73
CDK5RAP3-208ENST00000578525 GCFC2P16383 781 aaKnown RBP10.46□□□□□ -0.73
CDK5RAP3-208ENST00000578525 KRT9P35527 623 aa10.46□□□□□ -0.73
CDK5RAP3-208ENST00000578525 TNNI2P48788 182 aa10.46□□□□□ -0.73
CDK5RAP3-208ENST00000578525 DNM2P50570 870 aa10.46□□□□□ -0.73
CDK5RAP3-208ENST00000578525 MRPL12P52815 198 aaKnown RBP10.46□□□□□ -0.73
CDK5RAP3-208ENST00000578525 CBX1P83916 185 aa10.46□□□□□ -0.73
CDK5RAP3-208ENST00000578525 PPP2R3AQ06190 1150 aa10.46□□□□□ -0.73
CDK5RAP3-208ENST00000578525 TUBB2AQ13885 445 aa10.46□□□□□ -0.73
CDK5RAP3-208ENST00000578525 PDIA5Q14554 519 aa10.46□□□□□ -0.73
CDK5RAP3-208ENST00000578525 TMEM119Q4V9L6 283 aa10.46□□□□□ -0.73
CDK5RAP3-208ENST00000578525 PPP4R3AQ6IN85 833 aa10.46□□□□□ -0.73
CDK5RAP3-208ENST00000578525 TTBK2Q6IQ55 1244 aa10.46□□□□□ -0.73
CDK5RAP3-208ENST00000578525 STYK1Q6J9G0 422 aa10.46□□□□□ -0.73
CDK5RAP3-208ENST00000578525 UNC13DQ70J99 1090 aa10.46□□□□□ -0.73
CDK5RAP3-208ENST00000578525 PODNQ7Z5L7 613 aa10.46□□□□□ -0.73
CDK5RAP3-208ENST00000578525 CREBRFQ8IUR6 639 aa10.46□□□□□ -0.73
CDK5RAP3-208ENST00000578525 CSGALNACT2Q8N6G5 542 aa10.46□□□□□ -0.73
CDK5RAP3-208ENST00000578525 UBXN4Q92575 508 aa10.46□□□□□ -0.73
CDK5RAP3-208ENST00000578525 CUL5Q93034 780 aa10.46□□□□□ -0.73
CDK5RAP3-208ENST00000578525 TUBB2BQ9BVA1 445 aa10.46□□□□□ -0.73
CDK5RAP3-208ENST00000578525 GLT8D2Q9H1C3 349 aa10.46□□□□□ -0.73
CDK5RAP3-208ENST00000578525 DHX36Q9H2U1 1008 aaKnown RBP10.46□□□□□ -0.73
CDK5RAP3-208ENST00000578525 BLOC1S4Q9NUP1 217 aa10.46□□□□□ -0.73
CDK5RAP3-208ENST00000578525 NYAP2Q9P242 653 aa10.46□□□□□ -0.73
CDK5RAP3-208ENST00000578525 MYH4Q9Y623 1939 aa10.45□□□□□ -0.74
CDK5RAP3-208ENST00000578525 SPDYE4A6NLX3 237 aa10.45□□□□□ -0.74
CDK5RAP3-208ENST00000578525 USP17L10C9JJH3 530 aa10.45□□□□□ -0.74
CDK5RAP3-208ENST00000578525 NPM3O75607 178 aaKnown RBP10.45□□□□□ -0.74
CDK5RAP3-208ENST00000578525 ATP2B2Q01814 1243 aa10.45□□□□□ -0.74
CDK5RAP3-208ENST00000578525 NFIAQ12857 509 aa10.45□□□□□ -0.74
CDK5RAP3-208ENST00000578525 MCM6Q14566 821 aa10.45□□□□□ -0.74
CDK5RAP3-208ENST00000578525 UBE2SQ16763 222 aa10.45□□□□□ -0.74
CDK5RAP3-208ENST00000578525 ARHGAP29Q52LW3 1261 aa10.45□□□□□ -0.74
CDK5RAP3-208ENST00000578525 STRIP1Q5VSL9 837 aa10.45□□□□□ -0.74
CDK5RAP3-208ENST00000578525 KRT79Q5XKE5 535 aa10.45□□□□□ -0.74
CDK5RAP3-208ENST00000578525 C2CD5Q86YS7 1000 aa10.45□□□□□ -0.74
CDK5RAP3-208ENST00000578525 ACRBPQ8NEB7 543 aa10.45□□□□□ -0.74
CDK5RAP3-208ENST00000578525 SNX29Q8TEQ0 813 aa10.45□□□□□ -0.74
CDK5RAP3-208ENST00000578525 LARP4BQ92615 738 aaKnown RBP10.45□□□□□ -0.74
CDK5RAP3-208ENST00000578525 RAD54LQ92698 747 aa10.45□□□□□ -0.74
CDK5RAP3-208ENST00000578525 CNOT6LQ96LI5 555 aaKnown RBP10.45□□□□□ -0.74
CDK5RAP3-208ENST00000578525 NUP58Q9BVL2 599 aa10.45□□□□□ -0.74
CDK5RAP3-208ENST00000578525 IDI2Q9BXS1 227 aa10.45□□□□□ -0.74
CDK5RAP3-208ENST00000578525 ARGLU1Q9NWB6 273 aaPredicted RBP10.45□□□□□ -0.74
CDK5RAP3-208ENST00000578525 CAPN11Q9UMQ6 739 aa10.45□□□□□ -0.74
CDK5RAP3-208ENST00000578525 ATF5Q9Y2D1 282 aaPredicted RBP10.45□□□□□ -0.74
CDK5RAP3-208ENST00000578525 ARFGEF1Q9Y6D6 1849 aa10.44□□□□□ -0.74
CDK5RAP3-208ENST00000578525 KDM3AQ9Y4C1 1321 aa10.44□□□□□ -0.74
CDK5RAP3-208ENST00000578525 MYMKA6NI61 221 aa10.44□□□□□ -0.74
CDK5RAP3-208ENST00000578525 RNF225M0QZC1 329 aaPredicted RBP10.44□□□□□ -0.74
CDK5RAP3-208ENST00000578525 FCER1AP12319 257 aa10.44□□□□□ -0.74
CDK5RAP3-208ENST00000578525 SLC16A2P36021 539 aa10.44□□□□□ -0.74
CDK5RAP3-208ENST00000578525 MTIF2P46199 727 aaKnown RBP10.44□□□□□ -0.74
CDK5RAP3-208ENST00000578525 STK4Q13043 487 aa10.44□□□□□ -0.74
CDK5RAP3-208ENST00000578525 TSR1Q2NL82 804 aaKnown RBP10.44□□□□□ -0.74
CDK5RAP3-208ENST00000578525 ANKRD40Q6AI12 368 aa10.44□□□□□ -0.74
CDK5RAP3-208ENST00000578525 KCTD1Q719H9 257 aa10.44□□□□□ -0.74
CDK5RAP3-208ENST00000578525 RETREG2Q8NC44 543 aa10.44□□□□□ -0.74
CDK5RAP3-208ENST00000578525 KIAA0895Q8NCT3 520 aa10.44□□□□□ -0.74
CDK5RAP3-208ENST00000578525 OR8K1Q8NGG5 319 aa10.44□□□□□ -0.74
CDK5RAP3-208ENST00000578525 ZNF622Q969S3 477 aaKnown RBP eCLIP10.44□□□□□ -0.746e-13■■□□□ 12.3
CDK5RAP3-208ENST00000578525 MKL1Q969V6 931 aa10.44□□□□□ -0.74
CDK5RAP3-208ENST00000578525 IQCDQ96DY2 449 aa10.44□□□□□ -0.74
CDK5RAP3-208ENST00000578525 DNAJC7Q99615 494 aa10.44□□□□□ -0.74
CDK5RAP3-208ENST00000578525 TUBGCP2Q9BSJ2 902 aa10.44□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms