RNA–Protein interactions for RNA: ENST00000578299.1

PTP4A1-204, Transcript of protein tyrosine phosphatase type IVA, member 1, humanhuman

TSL 2 BASIC

Gene PTP4A1, Length 135 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A1-204ENST00000578299 MYO1BO43795 1136 aa3.31□□□□□ -1.88
PTP4A1-204ENST00000578299 GLI1P08151 1106 aa3.31□□□□□ -1.88
PTP4A1-204ENST00000578299 TRHRP34981 398 aaPredicted RBP3.31□□□□□ -1.88
PTP4A1-204ENST00000578299 KCNMB1Q16558 191 aa3.31□□□□□ -1.88
PTP4A1-204ENST00000578299 TIGD5Q53EQ6 642 aa3.31□□□□□ -1.88
PTP4A1-204ENST00000578299 FAM209AQ5JX71 171 aa3.31□□□□□ -1.88
PTP4A1-204ENST00000578299 FYB2Q5VWT5 728 aa3.31□□□□□ -1.88
PTP4A1-204ENST00000578299 FOXB2Q5VYV0 432 aa3.31□□□□□ -1.88
PTP4A1-204ENST00000578299 DENND5AQ6IQ26 1287 aa3.31□□□□□ -1.88
PTP4A1-204ENST00000578299 RSPO2Q6UXX9 243 aaPredicted RBP3.31□□□□□ -1.88
PTP4A1-204ENST00000578299 USP53Q70EK8 1073 aa3.31□□□□□ -1.88
PTP4A1-204ENST00000578299 NLRX1Q86UT6 975 aa3.31□□□□□ -1.88
PTP4A1-204ENST00000578299 ZSWIM9Q86XI8 627 aa3.31□□□□□ -1.88
PTP4A1-204ENST00000578299 CPNE8Q86YQ8 564 aa3.31□□□□□ -1.88
PTP4A1-204ENST00000578299 NUP43Q8NFH3 380 aa3.31□□□□□ -1.88
PTP4A1-204ENST00000578299 NLGN2Q8NFZ4 835 aa3.31□□□□□ -1.88
PTP4A1-204ENST00000578299 DCAF4Q8WV16 495 aa3.31□□□□□ -1.88
PTP4A1-204ENST00000578299 KISS1RQ969F8 398 aaPredicted RBP3.31□□□□□ -1.88
PTP4A1-204ENST00000578299 EXOC2Q96KP1 924 aa3.31□□□□□ -1.88
PTP4A1-204ENST00000578299 RNPC3Q96LT9 517 aaKnown RBP3.31□□□□□ -1.88
PTP4A1-204ENST00000578299 PLCD4Q9BRC7 762 aa3.31□□□□□ -1.88
PTP4A1-204ENST00000578299 RNF32Q9H0A6 362 aa3.31□□□□□ -1.88
PTP4A1-204ENST00000578299 PDLIM7Q9NR12 457 aa3.31□□□□□ -1.88
PTP4A1-204ENST00000578299 GPR27Q9NS67 375 aa3.31□□□□□ -1.88
PTP4A1-204ENST00000578299 IMPACTQ9P2X3 320 aa3.31□□□□□ -1.88
PTP4A1-204ENST00000578299 ACSL6Q9UKU0 697 aa3.31□□□□□ -1.88
PTP4A1-204ENST00000578299 TMA7Q9Y2S6 64 aaKnown RBP3.31□□□□□ -1.88
PTP4A1-204ENST00000578299 MRPS23Q9Y3D9 190 aaKnown RBP3.31□□□□□ -1.88
PTP4A1-204ENST00000578299 PTCH2Q9Y6C5 1203 aa3.31□□□□□ -1.88
PTP4A1-204ENST00000578299 A0A1W2PQJ5 194 aa3.3□□□□□ -1.88
PTP4A1-204ENST00000578299 TLDC2A0PJX2 215 aa3.3□□□□□ -1.88
PTP4A1-204ENST00000578299 PSPNO60542 156 aa3.3□□□□□ -1.88
PTP4A1-204ENST00000578299 PAPLNO95428 1278 aa3.3□□□□□ -1.88
PTP4A1-204ENST00000578299 PNLIPP16233 465 aa3.3□□□□□ -1.88
PTP4A1-204ENST00000578299 PRKCAP17252 672 aa3.3□□□□□ -1.88
PTP4A1-204ENST00000578299 ARL4AP40617 200 aa3.3□□□□□ -1.88
PTP4A1-204ENST00000578299 GTF2A2P52657 109 aa3.3□□□□□ -1.88
PTP4A1-204ENST00000578299 RPL11P62913 178 aaKnown RBP3.3□□□□□ -1.88
PTP4A1-204ENST00000578299 CYP4F8P98187 520 aa3.3□□□□□ -1.88
PTP4A1-204ENST00000578299 MVKQ03426 396 aa3.3□□□□□ -1.88
PTP4A1-204ENST00000578299 SQSTM1Q13501 440 aa3.3□□□□□ -1.88
PTP4A1-204ENST00000578299 NTRK3Q16288 839 aa3.3□□□□□ -1.88
PTP4A1-204ENST00000578299 MBLAC2Q68D91 279 aa3.3□□□□□ -1.88
PTP4A1-204ENST00000578299 STYK1Q6J9G0 422 aa3.3□□□□□ -1.88
PTP4A1-204ENST00000578299 MAMDC2Q7Z304 686 aaPredicted RBP3.3□□□□□ -1.88
PTP4A1-204ENST00000578299 JAZF1Q86VZ6 243 aa3.3□□□□□ -1.88
PTP4A1-204ENST00000578299 HOMER1Q86YM7 354 aa3.3□□□□□ -1.88
PTP4A1-204ENST00000578299 CCDC103Q8IW40 242 aa3.3□□□□□ -1.88
PTP4A1-204ENST00000578299 FAM168AQ92567 244 aa3.3□□□□□ -1.88
PTP4A1-204ENST00000578299 SHISA4Q96DD7 197 aa3.3□□□□□ -1.88
PTP4A1-204ENST00000578299 ZFYVE21Q9BQ24 234 aa3.3□□□□□ -1.88
PTP4A1-204ENST00000578299 PHF20Q9BVI0 1012 aa3.3□□□□□ -1.88
PTP4A1-204ENST00000578299 SLC6A17Q9H1V8 727 aa3.3□□□□□ -1.88
PTP4A1-204ENST00000578299 TMEM260Q9NX78 707 aa3.3□□□□□ -1.88
PTP4A1-204ENST00000578299 TMEFF2Q9UIK5 374 aaPredicted RBP3.3□□□□□ -1.88
PTP4A1-204ENST00000578299 YBX2Q9Y2T7 364 aaKnown RBP3.3□□□□□ -1.88
PTP4A1-204ENST00000578299 TIMM13Q9Y5L4 95 aaPredicted RBP3.3□□□□□ -1.88
PTP4A1-204ENST00000578299 MRPL42Q9Y6G3 142 aaKnown RBP3.3□□□□□ -1.88
PTP4A1-204ENST00000578299 ARNTLO00327 626 aa3.29□□□□□ -1.88
PTP4A1-204ENST00000578299 AQP7O14520 342 aa3.29□□□□□ -1.88
PTP4A1-204ENST00000578299 EFEMP2O95967 443 aa3.29□□□□□ -1.88
PTP4A1-204ENST00000578299 C6orf222P0C671 652 aaPredicted RBP3.29□□□□□ -1.88
PTP4A1-204ENST00000578299 TAL1P17542 331 aaPredicted RBP3.29□□□□□ -1.88
PTP4A1-204ENST00000578299 NAT1P18440 290 aa3.29□□□□□ -1.88
PTP4A1-204ENST00000578299 ERVFRD-1P60508 538 aa3.29□□□□□ -1.88
PTP4A1-204ENST00000578299 GABREP78334 506 aa3.29□□□□□ -1.88
PTP4A1-204ENST00000578299 INF2Q27J81 1249 aa3.29□□□□□ -1.88
PTP4A1-204ENST00000578299 XP32Q5T750 250 aa3.29□□□□□ -1.88
PTP4A1-204ENST00000578299 GIMAP6Q6P9H5 292 aa3.29□□□□□ -1.88
PTP4A1-204ENST00000578299 CABP7Q86V35 215 aa3.29□□□□□ -1.88
PTP4A1-204ENST00000578299 IRF2BP1Q8IU81 584 aa3.29□□□□□ -1.88
PTP4A1-204ENST00000578299 SIRT2Q8IXJ6 389 aa3.29□□□□□ -1.88
PTP4A1-204ENST00000578299 SYNPOQ8N3V7 929 aa3.29□□□□□ -1.88
PTP4A1-204ENST00000578299 LZTR1Q8N653 840 aa3.29□□□□□ -1.88
PTP4A1-204ENST00000578299 RCBTB1Q8NDN9 531 aa3.29□□□□□ -1.88
PTP4A1-204ENST00000578299 PUM2Q8TB72 1066 aaKnown RBP eCLIP3.29□□□□□ -1.882e-6■■■■■ 33
PTP4A1-204ENST00000578299 APPBP2Q92624 585 aa3.29□□□□□ -1.88
PTP4A1-204ENST00000578299 PTPRN2Q92932 1015 aa3.29□□□□□ -1.88
PTP4A1-204ENST00000578299 INTS4Q96HW7 963 aaKnown RBP3.29□□□□□ -1.88
PTP4A1-204ENST00000578299 MTA3Q9BTC8 594 aa3.29□□□□□ -1.88
PTP4A1-204ENST00000578299 KANSL2Q9H9L4 492 aa3.29□□□□□ -1.88
PTP4A1-204ENST00000578299 FAM53CQ9NYF3 392 aa3.29□□□□□ -1.88
PTP4A1-204ENST00000578299 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP3.29□□□□□ -1.882e-7■■■■■ 29.3
PTP4A1-204ENST00000578299 GULP1Q9UBP9 304 aa3.29□□□□□ -1.88
PTP4A1-204ENST00000578299 TBX22Q9Y458 520 aa3.29□□□□□ -1.88
PTP4A1-204ENST00000578299 CARMIL2Q6F5E8 1435 aa3.28□□□□□ -1.88
PTP4A1-204ENST00000578299 ESYT3A0FGR9 886 aa3.28□□□□□ -1.88
PTP4A1-204ENST00000578299 BLACEA4D250 179 aa3.28□□□□□ -1.88
PTP4A1-204ENST00000578299 H7BY64 318 aa3.28□□□□□ -1.88
PTP4A1-204ENST00000578299 ENPP3O14638 875 aa3.28□□□□□ -1.88
PTP4A1-204ENST00000578299 PLD2O14939 933 aa3.28□□□□□ -1.88
PTP4A1-204ENST00000578299 PPP1R11O60927 126 aaPredicted RBP3.28□□□□□ -1.88
PTP4A1-204ENST00000578299 EFCAB14O75071 495 aa3.28□□□□□ -1.88
PTP4A1-204ENST00000578299 CDC45O75419 566 aa3.28□□□□□ -1.88
PTP4A1-204ENST00000578299 MSL3P1P0C860 447 aa3.28□□□□□ -1.88
PTP4A1-204ENST00000578299 LCP1P13796 627 aa3.28□□□□□ -1.88
PTP4A1-204ENST00000578299 BCL6P41182 706 aa3.28□□□□□ -1.88
PTP4A1-204ENST00000578299 GPR85P60893 370 aa3.28□□□□□ -1.88
PTP4A1-204ENST00000578299 TMEM62Q0P6H9 643 aa3.28□□□□□ -1.88
PTP4A1-204ENST00000578299 LSAMPQ13449 338 aa3.28□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms