RNA–Protein interactions for RNA: ENST00000577246.5

COPS3-214, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 2

Gene COPS3, Length 639 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-214ENST00000577246 MYH7P12883 1935 aa15.83■□□□□ 0.12
COPS3-214ENST00000577246 PITPNM1O00562 1244 aa15.82■□□□□ 0.12
COPS3-214ENST00000577246 KPNA6O60684 536 aa15.82■□□□□ 0.12
COPS3-214ENST00000577246 ICAM1P05362 532 aa15.82■□□□□ 0.12
COPS3-214ENST00000577246 PURAQ00577 322 aaKnown RBP15.82■□□□□ 0.12
COPS3-214ENST00000577246 TTLL4Q14679 1199 aa15.82■□□□□ 0.12
COPS3-214ENST00000577246 DEFB128Q7Z7B8 93 aa15.82■□□□□ 0.12
COPS3-214ENST00000577246 MTG1Q9BT17 334 aaPredicted RBP15.82■□□□□ 0.12
COPS3-214ENST00000577246 WDR11Q9BZH6 1224 aa15.82■□□□□ 0.12
COPS3-214ENST00000577246 TRMT13Q9NUP7 481 aaKnown RBP15.82■□□□□ 0.12
COPS3-214ENST00000577246 PNMA2Q9UL42 364 aa15.82■□□□□ 0.12
COPS3-214ENST00000577246 PRR12Q9ULL5 1215 aa15.82■□□□□ 0.12
COPS3-214ENST00000577246 TSPY2A6NKD2 308 aa15.81■□□□□ 0.12
COPS3-214ENST00000577246 M0R2C6 588 aa15.81■□□□□ 0.12
COPS3-214ENST00000577246 NKRFO15226 690 aaKnown RBP eCLIP15.81■□□□□ 0.12
COPS3-214ENST00000577246 SMARCA5O60264 1052 aaPredicted RBP15.81■□□□□ 0.12
COPS3-214ENST00000577246 MYL3P08590 195 aa15.81■□□□□ 0.12
COPS3-214ENST00000577246 CYP2C9P11712 490 aa15.81■□□□□ 0.12
COPS3-214ENST00000577246 KCNQ1P51787 676 aa15.81■□□□□ 0.12
COPS3-214ENST00000577246 PPARAQ07869 468 aa15.81■□□□□ 0.12
COPS3-214ENST00000577246 BFSP2Q13515 415 aa15.81■□□□□ 0.12
COPS3-214ENST00000577246 MUM1L1Q5H9M0 696 aa15.81■□□□□ 0.12
COPS3-214ENST00000577246 FAM47CQ5HY64 1035 aa15.81■□□□□ 0.12
COPS3-214ENST00000577246 KCTD1Q719H9 257 aa15.81■□□□□ 0.12
COPS3-214ENST00000577246 HLA-CQ95604 372 aa15.81■□□□□ 0.12
COPS3-214ENST00000577246 BAIAP3O94812 1187 aa15.8■□□□□ 0.12
COPS3-214ENST00000577246 ALDH5A1P51649 535 aaPredicted RBP15.8■□□□□ 0.12
COPS3-214ENST00000577246 PTPN11Q06124 597 aaPredicted RBP15.8■□□□□ 0.12
COPS3-214ENST00000577246 NFRKBQ6P4R8 1299 aa15.8■□□□□ 0.12
COPS3-214ENST00000577246 CCDC155Q8N6L0 562 aa15.8■□□□□ 0.12
COPS3-214ENST00000577246 OR6J1Q8NGC5 347 aa15.8■□□□□ 0.12
COPS3-214ENST00000577246 FTOQ9C0B1 505 aaKnown RBP eCLIP15.8■□□□□ 0.12
COPS3-214ENST00000577246 NOD1Q9Y239 953 aa15.8■□□□□ 0.12
COPS3-214ENST00000577246 MYH4Q9Y623 1939 aa15.8■□□□□ 0.12
COPS3-214ENST00000577246 LRRC37A2A6NM11 1700 aa15.8■□□□□ 0.12
COPS3-214ENST00000577246 MCM3APO60318 1980 aa15.79■□□□□ 0.12
COPS3-214ENST00000577246 B4DLN1 442 aa15.79■□□□□ 0.12
COPS3-214ENST00000577246 PTGS1P23219 599 aa15.79■□□□□ 0.12
COPS3-214ENST00000577246 HOXD11P31277 338 aaPredicted RBP15.79■□□□□ 0.12
COPS3-214ENST00000577246 KCNJ6P48051 423 aa15.79■□□□□ 0.12
COPS3-214ENST00000577246 MRPL12P52815 198 aaKnown RBP15.79■□□□□ 0.12
COPS3-214ENST00000577246 PPP2R5BQ15173 497 aa15.79■□□□□ 0.12
COPS3-214ENST00000577246 CCDC96Q2M329 555 aa15.79■□□□□ 0.12
COPS3-214ENST00000577246 TMEM31Q5JXX7 168 aa15.79■□□□□ 0.12
COPS3-214ENST00000577246 HERC6Q8IVU3 1022 aa15.79■□□□□ 0.12
COPS3-214ENST00000577246 DCAF4Q8WV16 495 aa15.79■□□□□ 0.12
COPS3-214ENST00000577246 ARNTL2Q8WYA1 636 aa15.79■□□□□ 0.12
COPS3-214ENST00000577246 VWCEQ96DN2 955 aa15.79■□□□□ 0.12
COPS3-214ENST00000577246 RANBP17Q9H2T7 1088 aaKnown RBP15.79■□□□□ 0.12
COPS3-214ENST00000577246 XIRP2A4UGR9 3374 aa15.79■□□□□ 0.12
COPS3-214ENST00000577246 RBM47A0AV96 593 aaKnown RBP15.78■□□□□ 0.12
COPS3-214ENST00000577246 PTPDC1A2A3K4 754 aa15.78■□□□□ 0.12
COPS3-214ENST00000577246 IQCF3P0C7M6 154 aa15.78■□□□□ 0.12
COPS3-214ENST00000577246 TAP1Q03518 808 aa15.78■□□□□ 0.12
COPS3-214ENST00000577246 PDE4DQ08499 809 aa15.78■□□□□ 0.12
COPS3-214ENST00000577246 BAATQ14032 418 aaPredicted RBP15.78■□□□□ 0.12
COPS3-214ENST00000577246 NBPF20Q3BBV1 942 aa15.78■□□□□ 0.12
COPS3-214ENST00000577246 SCFD2Q8WU76 684 aa15.78■□□□□ 0.12
COPS3-214ENST00000577246 CHMP4CQ96CF2 233 aa15.78■□□□□ 0.12
COPS3-214ENST00000577246 CERS4Q9HA82 394 aa15.78■□□□□ 0.12
COPS3-214ENST00000577246 DDX49Q9Y6V7 483 aaKnown RBP15.78■□□□□ 0.12
COPS3-214ENST00000577246 TTC41PQ6P2S7 1318 aa15.77■□□□□ 0.12
COPS3-214ENST00000577246 CHD7Q9P2D1 2997 aa15.77■□□□□ 0.12
COPS3-214ENST00000577246 RFXAPO00287 272 aa15.77■□□□□ 0.12
COPS3-214ENST00000577246 TLL1O43897 1013 aa15.77■□□□□ 0.12
COPS3-214ENST00000577246 SNAP25P60880 206 aa15.77■□□□□ 0.12
COPS3-214ENST00000577246 TMEM63BQ5T3F8 832 aa15.77■□□□□ 0.12
COPS3-214ENST00000577246 LRFN3Q9BTN0 628 aa15.77■□□□□ 0.12
COPS3-214ENST00000577246 LMCD1Q9NZU5 365 aa15.77■□□□□ 0.12
COPS3-214ENST00000577246 GBF1Q92538 1859 aa15.76■□□□□ 0.11
COPS3-214ENST00000577246 BDP1A6H8Y1 2624 aa15.76■□□□□ 0.11
COPS3-214ENST00000577246 A6NJR5 290 aa15.76■□□□□ 0.11
COPS3-214ENST00000577246 PARNO95453 639 aaKnown RBP15.76■□□□□ 0.11
COPS3-214ENST00000577246 SYDE2Q5VT97 1194 aa15.76■□□□□ 0.11
COPS3-214ENST00000577246 BTNL9Q6UXG8 535 aa15.76■□□□□ 0.11
COPS3-214ENST00000577246 DNERQ8NFT8 737 aa15.76■□□□□ 0.11
COPS3-214ENST00000577246 CAGE1Q8TC20 777 aa15.76■□□□□ 0.11
COPS3-214ENST00000577246 FSD1Q9BTV5 496 aa15.76■□□□□ 0.11
COPS3-214ENST00000577246 MTMR7Q9Y216 660 aa15.76■□□□□ 0.11
COPS3-214ENST00000577246 DDX52Q9Y2R4 599 aaKnown RBP eCLIP15.76■□□□□ 0.11
COPS3-214ENST00000577246 EPOPA6NHQ4 379 aa15.75■□□□□ 0.11
COPS3-214ENST00000577246 NFIBO00712 420 aa15.75■□□□□ 0.11
COPS3-214ENST00000577246 RANBP6O60518 1105 aaKnown RBP15.75■□□□□ 0.11
COPS3-214ENST00000577246 CALML3P27482 149 aa15.75■□□□□ 0.11
COPS3-214ENST00000577246 GRB10Q13322 594 aa15.75■□□□□ 0.11
COPS3-214ENST00000577246 TSHZ3Q63HK5 1081 aa15.75■□□□□ 0.11
COPS3-214ENST00000577246 RNF207Q6ZRF8 634 aa15.75■□□□□ 0.11
COPS3-214ENST00000577246 AFAP1L1Q8TED9 768 aa15.75■□□□□ 0.11
COPS3-214ENST00000577246 PURBQ96QR8 312 aaKnown RBP15.75■□□□□ 0.11
COPS3-214ENST00000577246 ZBED2Q9BTP6 218 aa15.75■□□□□ 0.11
COPS3-214ENST00000577246 EPHX3Q9H6B9 360 aa15.75■□□□□ 0.11
COPS3-214ENST00000577246 IL17RBQ9NRM6 502 aa15.75■□□□□ 0.11
COPS3-214ENST00000577246 GPR37L1O60883 481 aa15.74■□□□□ 0.11
COPS3-214ENST00000577246 NOVP48745 357 aa15.74■□□□□ 0.11
COPS3-214ENST00000577246 ZMYM1Q5SVZ6 1142 aa15.74■□□□□ 0.11
COPS3-214ENST00000577246 SEC62Q99442 399 aaKnown RBP15.74■□□□□ 0.11
COPS3-214ENST00000577246 DCTPP1Q9H773 170 aa15.74■□□□□ 0.11
COPS3-214ENST00000577246 NCOR1O75376 2440 aa15.74■□□□□ 0.11
COPS3-214ENST00000577246 MYO9BQ13459 2157 aa15.73■□□□□ 0.11
COPS3-214ENST00000577246 NMT2O60551 498 aa15.73■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 99.6 ms