RNA–Protein interactions for RNA: ENST00000576940.1

NPLOC4-220, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 5

Gene NPLOC4, Length 216 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-220ENST00000576940 NSMFQ6X4W1 530 aa12.03□□□□□ -0.48
NPLOC4-220ENST00000576940 RASGRP2Q7LDG7 609 aa12.03□□□□□ -0.48
NPLOC4-220ENST00000576940 FAM160B2Q86V87 743 aa12.03□□□□□ -0.48
NPLOC4-220ENST00000576940 KBTBD3Q8NAB2 608 aa12.03□□□□□ -0.48
NPLOC4-220ENST00000576940 APPBP2Q92624 585 aa12.03□□□□□ -0.48
NPLOC4-220ENST00000576940 WDR11Q9BZH6 1224 aa12.03□□□□□ -0.48
NPLOC4-220ENST00000576940 ZNF287Q9HBT7 754 aa12.03□□□□□ -0.48
NPLOC4-220ENST00000576940 INCENPQ9NQS7 918 aa12.03□□□□□ -0.48
NPLOC4-220ENST00000576940 PRR12Q9ULL5 1215 aa12.03□□□□□ -0.48
NPLOC4-220ENST00000576940 SYNPO2Q9UMS6 1093 aa12.03□□□□□ -0.48
NPLOC4-220ENST00000576940 MYH7P12883 1935 aa12.03□□□□□ -0.48
NPLOC4-220ENST00000576940 FAM86C2PA6NEL3 165 aa12.02□□□□□ -0.49
NPLOC4-220ENST00000576940 PFKMP08237 780 aa12.02□□□□□ -0.49
NPLOC4-220ENST00000576940 IQCF3P0C7M6 154 aa12.02□□□□□ -0.49
NPLOC4-220ENST00000576940 ACTN1P12814 892 aa12.02□□□□□ -0.49
NPLOC4-220ENST00000576940 PURAQ00577 322 aaKnown RBP12.02□□□□□ -0.49
NPLOC4-220ENST00000576940 GRB10Q13322 594 aa12.02□□□□□ -0.49
NPLOC4-220ENST00000576940 BAATQ14032 418 aaPredicted RBP12.02□□□□□ -0.49
NPLOC4-220ENST00000576940 NBPF20Q3BBV1 942 aa12.02□□□□□ -0.49
NPLOC4-220ENST00000576940 FAM47CQ5HY64 1035 aa12.02□□□□□ -0.49
NPLOC4-220ENST00000576940 TSHZ3Q63HK5 1081 aa12.02□□□□□ -0.49
NPLOC4-220ENST00000576940 RCSD1Q6JBY9 416 aa12.02□□□□□ -0.49
NPLOC4-220ENST00000576940 HERC6Q8IVU3 1022 aa12.02□□□□□ -0.49
NPLOC4-220ENST00000576940 PHOSPHO2Q8TCD6 241 aa12.02□□□□□ -0.49
NPLOC4-220ENST00000576940 HLA-CQ95604 372 aa12.02□□□□□ -0.49
NPLOC4-220ENST00000576940 SEC62Q99442 399 aaKnown RBP12.02□□□□□ -0.49
NPLOC4-220ENST00000576940 LRRCC1Q9C099 1032 aa12.02□□□□□ -0.49
NPLOC4-220ENST00000576940 FTOQ9C0B1 505 aaKnown RBP eCLIP12.02□□□□□ -0.49
NPLOC4-220ENST00000576940 VTA1Q9NP79 307 aa12.02□□□□□ -0.49
NPLOC4-220ENST00000576940 CD320Q9NPF0 282 aa12.02□□□□□ -0.49
NPLOC4-220ENST00000576940 C11orf16Q9NQ32 467 aa12.02□□□□□ -0.49
NPLOC4-220ENST00000576940 POLR3EQ9NVU0 708 aa12.02□□□□□ -0.49
NPLOC4-220ENST00000576940 MTMR7Q9Y216 660 aa12.02□□□□□ -0.49
NPLOC4-220ENST00000576940 HCN4Q9Y3Q4 1203 aa12.02□□□□□ -0.49
NPLOC4-220ENST00000576940 KIF28PB7ZC32 967 aa12.01□□□□□ -0.49
NPLOC4-220ENST00000576940 LPXNO60711 386 aa12.01□□□□□ -0.49
NPLOC4-220ENST00000576940 TMCO2Q7Z6W1 182 aaPredicted RBP12.01□□□□□ -0.49
NPLOC4-220ENST00000576940 RETREG2Q8NC44 543 aa12.01□□□□□ -0.49
NPLOC4-220ENST00000576940 MORC4Q8TE76 937 aa12.01□□□□□ -0.49
NPLOC4-220ENST00000576940 GMCL1Q96IK5 515 aa12.01□□□□□ -0.49
NPLOC4-220ENST00000576940 SLC9A7Q96T83 725 aa12.01□□□□□ -0.49
NPLOC4-220ENST00000576940 MTG1Q9BT17 334 aaPredicted RBP12.01□□□□□ -0.49
NPLOC4-220ENST00000576940 GPHNQ9NQX3 736 aaPredicted RBP12.01□□□□□ -0.49
NPLOC4-220ENST00000576940 IL17RBQ9NRM6 502 aa12.01□□□□□ -0.49
NPLOC4-220ENST00000576940 ECHDC1Q9NTX5 307 aa12.01□□□□□ -0.49
NPLOC4-220ENST00000576940 CCPG1Q9ULG6 757 aa12.01□□□□□ -0.49
NPLOC4-220ENST00000576940 DDX19BQ9UMR2 479 aa12.01□□□□□ -0.49
NPLOC4-220ENST00000576940 STX8Q9UNK0 236 aa12.01□□□□□ -0.49
NPLOC4-220ENST00000576940 ARIH1Q9Y4X5 557 aaPredicted RBP12.01□□□□□ -0.49
NPLOC4-220ENST00000576940 LCHNA4D1U4 455 aa12□□□□□ -0.49
NPLOC4-220ENST00000576940 NMT2O60551 498 aa12□□□□□ -0.49
NPLOC4-220ENST00000576940 PLA2G6O60733 806 aa12□□□□□ -0.49
NPLOC4-220ENST00000576940 GPR37L1O60883 481 aa12□□□□□ -0.49
NPLOC4-220ENST00000576940 GNAT2P19087 354 aa12□□□□□ -0.49
NPLOC4-220ENST00000576940 ALDH5A1P51649 535 aaPredicted RBP12□□□□□ -0.49
NPLOC4-220ENST00000576940 CHMP4BP1P59074 171 aa12□□□□□ -0.49
NPLOC4-220ENST00000576940 PDE4BQ07343 736 aa12□□□□□ -0.49
NPLOC4-220ENST00000576940 TTBK2Q6IQ55 1244 aa12□□□□□ -0.49
NPLOC4-220ENST00000576940 OR6J1Q8NGC5 347 aa12□□□□□ -0.49
NPLOC4-220ENST00000576940 COPS5Q92905 334 aa12□□□□□ -0.49
NPLOC4-220ENST00000576940 TET1Q8NFU7 2136 aa11.99□□□□□ -0.49
NPLOC4-220ENST00000576940 RBM47A0AV96 593 aaKnown RBP11.99□□□□□ -0.49
NPLOC4-220ENST00000576940 MS4A1P11836 297 aa11.99□□□□□ -0.49
NPLOC4-220ENST00000576940 RFC2P35250 354 aa11.99□□□□□ -0.49
NPLOC4-220ENST00000576940 SLC16A2P36021 539 aa11.99□□□□□ -0.49
NPLOC4-220ENST00000576940 CPT1AP50416 773 aa11.99□□□□□ -0.49
NPLOC4-220ENST00000576940 PPARAQ07869 468 aa11.99□□□□□ -0.49
NPLOC4-220ENST00000576940 ADD3Q9UEY8 706 aaKnown RBP11.99□□□□□ -0.49
NPLOC4-220ENST00000576940 PLIN4Q96Q06 1357 aa11.98□□□□□ -0.49
NPLOC4-220ENST00000576940 PTPDC1A2A3K4 754 aa11.98□□□□□ -0.49
NPLOC4-220ENST00000576940 PI4K2BG5E9Z4 385 aa11.98□□□□□ -0.49
NPLOC4-220ENST00000576940 PITPNM1O00562 1244 aa11.98□□□□□ -0.49
NPLOC4-220ENST00000576940 NFIBO00712 420 aa11.98□□□□□ -0.49
NPLOC4-220ENST00000576940 ICAM1P05362 532 aa11.98□□□□□ -0.49
NPLOC4-220ENST00000576940 ZFYP08048 801 aaPredicted RBP11.98□□□□□ -0.49
NPLOC4-220ENST00000576940 SLC3A2P08195 630 aaKnown RBP11.98□□□□□ -0.49
NPLOC4-220ENST00000576940 CALML3P27482 149 aa11.98□□□□□ -0.49
NPLOC4-220ENST00000576940 CTDSPL2Q05D32 466 aa11.98□□□□□ -0.49
NPLOC4-220ENST00000576940 GPNMBQ14956 572 aa11.98□□□□□ -0.49
NPLOC4-220ENST00000576940 NFRKBQ6P4R8 1299 aa11.98□□□□□ -0.49
NPLOC4-220ENST00000576940 ALYREFQ86V81 257 aaKnown RBP11.98□□□□□ -0.49
NPLOC4-220ENST00000576940 NACAP1Q9BZK3 213 aa11.98□□□□□ -0.49
NPLOC4-220ENST00000576940 NAPBQ9H115 298 aa11.98□□□□□ -0.49
NPLOC4-220ENST00000576940 MTUS1Q9ULD2 1270 aa11.98□□□□□ -0.49
NPLOC4-220ENST00000576940 TRIP12Q14669 1992 aaPredicted RBP11.98□□□□□ -0.49
NPLOC4-220ENST00000576940 LCTP09848 1927 aa11.98□□□□□ -0.49
NPLOC4-220ENST00000576940 LRRC37A2A6NM11 1700 aa11.97□□□□□ -0.49
NPLOC4-220ENST00000576940 TSPY2A6NKD2 308 aa11.97□□□□□ -0.49
NPLOC4-220ENST00000576940 BFSP2Q13515 415 aa11.97□□□□□ -0.49
NPLOC4-220ENST00000576940 CCDC96Q2M329 555 aa11.97□□□□□ -0.49
NPLOC4-220ENST00000576940 SLC30A10Q6XR72 485 aa11.97□□□□□ -0.49
NPLOC4-220ENST00000576940 GDPD5Q8WTR4 605 aa11.97□□□□□ -0.49
NPLOC4-220ENST00000576940 ZBED2Q9BTP6 218 aa11.97□□□□□ -0.49
NPLOC4-220ENST00000576940 RANBP17Q9H2T7 1088 aaKnown RBP11.97□□□□□ -0.49
NPLOC4-220ENST00000576940 SUGCTQ9HAC7 445 aa11.97□□□□□ -0.49
NPLOC4-220ENST00000576940 NOD1Q9Y239 953 aa11.97□□□□□ -0.49
NPLOC4-220ENST00000576940 A6NJR5 290 aa11.96□□□□□ -0.49
NPLOC4-220ENST00000576940 TXNP10599 105 aaKnown RBP11.96□□□□□ -0.49
NPLOC4-220ENST00000576940 KCNJ6P48051 423 aa11.96□□□□□ -0.49
NPLOC4-220ENST00000576940 WDR5P61964 334 aaKnown RBP11.96□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms