RNA–Protein interactions for RNA: ENST00000575711.1

RPAIN-217, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 732 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-217ENST00000575711 COBLO75128 1261 aa16.1■□□□□ 0.17
RPAIN-217ENST00000575711 CFBP00751 764 aa16.1■□□□□ 0.17
RPAIN-217ENST00000575711 CALML3P27482 149 aa16.1■□□□□ 0.17
RPAIN-217ENST00000575711 RPS6P62753 249 aaKnown RBP16.1■□□□□ 0.17
RPAIN-217ENST00000575711 FBXO46Q6PJ61 603 aaPredicted RBP16.1■□□□□ 0.17
RPAIN-217ENST00000575711 SLC30A10Q6XR72 485 aa16.1■□□□□ 0.17
RPAIN-217ENST00000575711 HSCBQ8IWL3 235 aa16.1■□□□□ 0.17
RPAIN-217ENST00000575711 CCDC148Q8NFR7 591 aa16.1■□□□□ 0.17
RPAIN-217ENST00000575711 MAP3K20Q9NYL2 800 aaKnown RBP16.1■□□□□ 0.17
RPAIN-217ENST00000575711 DIS3Q9Y2L1 958 aaKnown RBP16.1■□□□□ 0.17
RPAIN-217ENST00000575711 PTCH2Q9Y6C5 1203 aa16.1■□□□□ 0.17
RPAIN-217ENST00000575711 PLXNB2O15031 1838 aa16.1■□□□□ 0.17
RPAIN-217ENST00000575711 GCOM1H8Y6P7 765 aaPredicted RBP16.09■□□□□ 0.17
RPAIN-217ENST00000575711 K7ELQ4 463 aaPredicted RBP16.09■□□□□ 0.17
RPAIN-217ENST00000575711 OPLAHO14841 1288 aa16.09■□□□□ 0.17
RPAIN-217ENST00000575711 JAK2O60674 1132 aa16.09■□□□□ 0.17
RPAIN-217ENST00000575711 POLR2MP0CAP2 368 aa16.09■□□□□ 0.17
RPAIN-217ENST00000575711 HMGN5P82970 282 aaKnown RBP16.09■□□□□ 0.17
RPAIN-217ENST00000575711 GHRHRQ02643 423 aa16.09■□□□□ 0.17
RPAIN-217ENST00000575711 ZNF792Q3KQV3 632 aa16.09■□□□□ 0.17
RPAIN-217ENST00000575711 TRMT44Q8IYL2 757 aaKnown RBP16.09■□□□□ 0.17
RPAIN-217ENST00000575711 NPLOC4Q8TAT6 608 aa16.09■□□□□ 0.17
RPAIN-217ENST00000575711 CUL5Q93034 780 aa16.09■□□□□ 0.17
RPAIN-217ENST00000575711 PSTPIP2Q9H939 334 aa16.09■□□□□ 0.17
RPAIN-217ENST00000575711 MYH6P13533 1939 aa16.09■□□□□ 0.17
RPAIN-217ENST00000575711 SMCO2A6NFE2 343 aa16.08■□□□□ 0.16
RPAIN-217ENST00000575711 ADCY3O60266 1144 aa16.08■□□□□ 0.16
RPAIN-217ENST00000575711 DTNBO60941 627 aa16.08■□□□□ 0.16
RPAIN-217ENST00000575711 XBP1P17861 261 aa16.08■□□□□ 0.16
RPAIN-217ENST00000575711 HSD17B4P51659 736 aa16.08■□□□□ 0.16
RPAIN-217ENST00000575711 MRPL12P52815 198 aaKnown RBP16.08■□□□□ 0.16
RPAIN-217ENST00000575711 TYW1BQ6NUM6 668 aa16.08■□□□□ 0.16
RPAIN-217ENST00000575711 FAM133AQ8N9E0 248 aa16.08■□□□□ 0.16
RPAIN-217ENST00000575711 SLAIN1Q8ND83 568 aa16.08■□□□□ 0.16
RPAIN-217ENST00000575711 SMARCC2Q8TAQ2 1214 aa16.08■□□□□ 0.16
RPAIN-217ENST00000575711 PXYLP1Q8TE99 480 aa16.08■□□□□ 0.16
RPAIN-217ENST00000575711 TBC1D5Q92609 795 aa16.08■□□□□ 0.16
RPAIN-217ENST00000575711 MAML3Q96JK9 1138 aa16.08■□□□□ 0.16
RPAIN-217ENST00000575711 GLT8D2Q9H1C3 349 aa16.08■□□□□ 0.16
RPAIN-217ENST00000575711 SH3GLB2Q9NR46 395 aa16.08■□□□□ 0.16
RPAIN-217ENST00000575711 VPS54Q9P1Q0 977 aa16.08■□□□□ 0.16
RPAIN-217ENST00000575711 ADD3Q9UEY8 706 aaKnown RBP16.08■□□□□ 0.16
RPAIN-217ENST00000575711 ESYT2A0FGR8 921 aa16.07■□□□□ 0.16
RPAIN-217ENST00000575711 FDPSP14324 419 aaKnown RBP16.07■□□□□ 0.16
RPAIN-217ENST00000575711 HOXA13P31271 388 aaPredicted RBP16.07■□□□□ 0.16
RPAIN-217ENST00000575711 ADCY7P51828 1080 aa16.07■□□□□ 0.16
RPAIN-217ENST00000575711 CNTN2Q02246 1040 aa16.07■□□□□ 0.16
RPAIN-217ENST00000575711 OLFML2BQ68BL8 750 aa16.07■□□□□ 0.16
RPAIN-217ENST00000575711 ZNF467Q7Z7K2 595 aaPredicted RBP16.07■□□□□ 0.16
RPAIN-217ENST00000575711 TEX2Q8IWB9 1127 aa16.07■□□□□ 0.16
RPAIN-217ENST00000575711 FAM177A1Q8N128 213 aaPredicted RBP16.07■□□□□ 0.16
RPAIN-217ENST00000575711 FAM184AQ8NB25 1140 aa16.07■□□□□ 0.16
RPAIN-217ENST00000575711 SYTL5Q8TDW5 730 aaPredicted RBP16.07■□□□□ 0.16
RPAIN-217ENST00000575711 AIFM3Q96NN9 605 aa16.07■□□□□ 0.16
RPAIN-217ENST00000575711 ALG1Q9BT22 464 aa16.07■□□□□ 0.16
RPAIN-217ENST00000575711 C6orf50Q9HD87 102 aa16.07■□□□□ 0.16
RPAIN-217ENST00000575711 RIC8AQ9NPQ8 531 aa16.07■□□□□ 0.16
RPAIN-217ENST00000575711 ZSCAN21Q9Y5A6 473 aaPredicted RBP16.07■□□□□ 0.16
RPAIN-217ENST00000575711 PIK3CDO00329 1044 aa16.06■□□□□ 0.16
RPAIN-217ENST00000575711 ELNP15502 786 aa16.06■□□□□ 0.16
RPAIN-217ENST00000575711 GNA11P29992 359 aa16.06■□□□□ 0.16
RPAIN-217ENST00000575711 GRK4P32298 578 aa16.06■□□□□ 0.16
RPAIN-217ENST00000575711 NLRP5P59047 1200 aa16.06■□□□□ 0.16
RPAIN-217ENST00000575711 CCL14Q16627 93 aa16.06■□□□□ 0.16
RPAIN-217ENST00000575711 SLC9C1Q4G0N8 1177 aa16.06■□□□□ 0.16
RPAIN-217ENST00000575711 MSL3Q8N5Y2 521 aaKnown RBP16.06■□□□□ 0.16
RPAIN-217ENST00000575711 DNERQ8NFT8 737 aa16.06■□□□□ 0.16
RPAIN-217ENST00000575711 TRIB2Q92519 343 aa16.06■□□□□ 0.16
RPAIN-217ENST00000575711 MPHOSPH6Q99547 160 aaKnown RBP16.06■□□□□ 0.16
RPAIN-217ENST00000575711 ZMYND12Q9H0C1 365 aa16.06■□□□□ 0.16
RPAIN-217ENST00000575711 SMCHD1A6NHR9 2005 aa16.06■□□□□ 0.16
RPAIN-217ENST00000575711 SOWAHBA6NEL2 793 aa16.05■□□□□ 0.16
RPAIN-217ENST00000575711 ASB14A6NK59 587 aa16.05■□□□□ 0.16
RPAIN-217ENST00000575711 B4DLN1 442 aa16.05■□□□□ 0.16
RPAIN-217ENST00000575711 MEIS2O14770 477 aa16.05■□□□□ 0.16
RPAIN-217ENST00000575711 HMGCRP04035 888 aa16.05■□□□□ 0.16
RPAIN-217ENST00000575711 ALDH5A1P51649 535 aaPredicted RBP16.05■□□□□ 0.16
RPAIN-217ENST00000575711 CUL4AQ13619 759 aa16.05■□□□□ 0.16
RPAIN-217ENST00000575711 TRIM29Q14134 588 aa16.05■□□□□ 0.16
RPAIN-217ENST00000575711 MFSD14CQ5VZR4 134 aa16.05■□□□□ 0.16
RPAIN-217ENST00000575711 USP17L6PQ6QN14 398 aa16.05■□□□□ 0.16
RPAIN-217ENST00000575711 FCHSD1Q86WN1 690 aa16.05■□□□□ 0.16
RPAIN-217ENST00000575711 BICD2Q8TD16 824 aa16.05■□□□□ 0.16
RPAIN-217ENST00000575711 FGD4Q96M96 766 aa16.05■□□□□ 0.16
RPAIN-217ENST00000575711 PURBQ96QR8 312 aaKnown RBP16.05■□□□□ 0.16
RPAIN-217ENST00000575711 TAAR1Q96RJ0 339 aa16.05■□□□□ 0.16
RPAIN-217ENST00000575711 RMDN3Q96TC7 470 aa16.05■□□□□ 0.16
RPAIN-217ENST00000575711 MCOLN1Q9GZU1 580 aa16.05■□□□□ 0.16
RPAIN-217ENST00000575711 FLRT1Q9NZU1 646 aa16.05■□□□□ 0.16
RPAIN-217ENST00000575711 COL20A1Q9P218 1284 aa16.05■□□□□ 0.16
RPAIN-217ENST00000575711 BIN2Q9UBW5 565 aaPredicted RBP16.05■□□□□ 0.16
RPAIN-217ENST00000575711 KIF3AQ9Y496 699 aa16.05■□□□□ 0.16
RPAIN-217ENST00000575711 RBBP6Q7Z6E9 1792 aaKnown RBP16.05■□□□□ 0.16
RPAIN-217ENST00000575711 DOCK3Q8IZD9 2030 aa16.04■□□□□ 0.16
RPAIN-217ENST00000575711 LOC102724159A0A0B4J2E5 919 aa16.04■□□□□ 0.16
RPAIN-217ENST00000575711 SPDYE3A6NKU9 549 aa16.04■□□□□ 0.16
RPAIN-217ENST00000575711 PWP2Q15269 919 aaKnown RBP16.04■□□□□ 0.16
RPAIN-217ENST00000575711 UBE2SQ16763 222 aa16.04■□□□□ 0.16
RPAIN-217ENST00000575711 ARHGEF16Q5VV41 709 aa16.04■□□□□ 0.16
RPAIN-217ENST00000575711 GALNT17Q6IS24 598 aa16.04■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 52.6 ms