RNA–Protein interactions for RNA: ENST00000575454.1

SMG6-218, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 3

Gene SMG6, Length 652 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-218ENST00000575454 MTG1Q9BT17 334 aaPredicted RBP10.68□□□□□ -0.7
SMG6-218ENST00000575454 WDR11Q9BZH6 1224 aa10.68□□□□□ -0.7
SMG6-218ENST00000575454 FTOQ9C0B1 505 aaKnown RBP eCLIP10.68□□□□□ -0.7
SMG6-218ENST00000575454 PDGFCQ9NRA1 345 aa10.68□□□□□ -0.7
SMG6-218ENST00000575454 TRMT13Q9NUP7 481 aaKnown RBP10.68□□□□□ -0.7
SMG6-218ENST00000575454 LMCD1Q9NZU5 365 aa10.68□□□□□ -0.7
SMG6-218ENST00000575454 PNMA2Q9UL42 364 aa10.68□□□□□ -0.7
SMG6-218ENST00000575454 B4DLN1 442 aa10.67□□□□□ -0.7
SMG6-218ENST00000575454 NKRFO15226 690 aaKnown RBP eCLIP10.67□□□□□ -0.7
SMG6-218ENST00000575454 GPR37L1O60883 481 aa10.67□□□□□ -0.7
SMG6-218ENST00000575454 CYP2C9P11712 490 aa10.67□□□□□ -0.7
SMG6-218ENST00000575454 MCCP23508 829 aa10.67□□□□□ -0.7
SMG6-218ENST00000575454 MRPL12P52815 198 aaKnown RBP10.67□□□□□ -0.7
SMG6-218ENST00000575454 PURAQ00577 322 aaKnown RBP10.67□□□□□ -0.7
SMG6-218ENST00000575454 TFAP4Q01664 338 aa10.67□□□□□ -0.7
SMG6-218ENST00000575454 NFRKBQ6P4R8 1299 aa10.67□□□□□ -0.7
SMG6-218ENST00000575454 NSMFQ6X4W1 530 aa10.67□□□□□ -0.7
SMG6-218ENST00000575454 HERC6Q8IVU3 1022 aa10.67□□□□□ -0.7
SMG6-218ENST00000575454 IFNL3Q8IZI9 196 aa10.67□□□□□ -0.7
SMG6-218ENST00000575454 CCDC155Q8N6L0 562 aa10.67□□□□□ -0.7
SMG6-218ENST00000575454 VWCEQ96DN2 955 aa10.67□□□□□ -0.7
SMG6-218ENST00000575454 EPHX3Q9H6B9 360 aa10.67□□□□□ -0.7
SMG6-218ENST00000575454 CCPG1Q9ULG6 757 aa10.67□□□□□ -0.7
SMG6-218ENST00000575454 NOD1Q9Y239 953 aa10.67□□□□□ -0.7
SMG6-218ENST00000575454 MYH1P12882 1939 aa10.66□□□□□ -0.7
SMG6-218ENST00000575454 PLIN4Q96Q06 1357 aa10.66□□□□□ -0.7
SMG6-218ENST00000575454 RBM47A0AV96 593 aaKnown RBP10.66□□□□□ -0.7
SMG6-218ENST00000575454 PARNO95453 639 aaKnown RBP10.66□□□□□ -0.7
SMG6-218ENST00000575454 ICAM1P05362 532 aa10.66□□□□□ -0.7
SMG6-218ENST00000575454 MYL3P08590 195 aa10.66□□□□□ -0.7
SMG6-218ENST00000575454 IQCF3P0C7M6 154 aa10.66□□□□□ -0.7
SMG6-218ENST00000575454 KCNJ6P48051 423 aa10.66□□□□□ -0.7
SMG6-218ENST00000575454 TAP1Q03518 808 aa10.66□□□□□ -0.7
SMG6-218ENST00000575454 FAM47CQ5HY64 1035 aa10.66□□□□□ -0.7
SMG6-218ENST00000575454 OR6J1Q8NGC5 347 aa10.66□□□□□ -0.7
SMG6-218ENST00000575454 CERS4Q9HA82 394 aa10.66□□□□□ -0.7
SMG6-218ENST00000575454 EPB41L4AQ9HCS5 686 aaPredicted RBP10.66□□□□□ -0.7
SMG6-218ENST00000575454 STX8Q9UNK0 236 aa10.66□□□□□ -0.7
SMG6-218ENST00000575454 A6NJR5 290 aa10.65□□□□□ -0.7
SMG6-218ENST00000575454 PI4K2BG5E9Z4 385 aa10.65□□□□□ -0.7
SMG6-218ENST00000575454 RFXAPO00287 272 aa10.65□□□□□ -0.7
SMG6-218ENST00000575454 HNRNPUQ00839 825 aaKnown RBP eCLIP10.65□□□□□ -0.7
SMG6-218ENST00000575454 GRB10Q13322 594 aa10.65□□□□□ -0.7
SMG6-218ENST00000575454 NBPF20Q3BBV1 942 aa10.65□□□□□ -0.7
SMG6-218ENST00000575454 KCTD1Q719H9 257 aa10.65□□□□□ -0.7
SMG6-218ENST00000575454 CAGE1Q8TC20 777 aa10.65□□□□□ -0.7
SMG6-218ENST00000575454 DCAF4Q8WV16 495 aa10.65□□□□□ -0.7
SMG6-218ENST00000575454 ZBED2Q9BTP6 218 aa10.65□□□□□ -0.7
SMG6-218ENST00000575454 NAPBQ9H115 298 aa10.65□□□□□ -0.7
SMG6-218ENST00000575454 PRR12Q9ULL5 1215 aa10.65□□□□□ -0.7
SMG6-218ENST00000575454 WDFY4Q6ZS81 3184 aa10.65□□□□□ -0.71
SMG6-218ENST00000575454 EPOPA6NHQ4 379 aa10.64□□□□□ -0.71
SMG6-218ENST00000575454 TSPY2A6NKD2 308 aa10.64□□□□□ -0.71
SMG6-218ENST00000575454 EFCAB14O75071 495 aa10.64□□□□□ -0.71
SMG6-218ENST00000575454 ALDH5A1P51649 535 aaPredicted RBP10.64□□□□□ -0.71
SMG6-218ENST00000575454 PPARAQ07869 468 aa10.64□□□□□ -0.71
SMG6-218ENST00000575454 PDE4DQ08499 809 aa10.64□□□□□ -0.71
SMG6-218ENST00000575454 BAATQ14032 418 aaPredicted RBP10.64□□□□□ -0.71
SMG6-218ENST00000575454 PPP2R5BQ15173 497 aa10.64□□□□□ -0.71
SMG6-218ENST00000575454 MUM1L1Q5H9M0 696 aa10.64□□□□□ -0.71
SMG6-218ENST00000575454 TMEM63BQ5T3F8 832 aa10.64□□□□□ -0.71
SMG6-218ENST00000575454 AFAP1L1Q8TED9 768 aa10.64□□□□□ -0.71
SMG6-218ENST00000575454 SCFD2Q8WU76 684 aa10.64□□□□□ -0.71
SMG6-218ENST00000575454 CDK5RAP2Q96SN8 1893 aa10.64□□□□□ -0.71
SMG6-218ENST00000575454 PTPDC1A2A3K4 754 aa10.63□□□□□ -0.71
SMG6-218ENST00000575454 PTGS1P23219 599 aa10.63□□□□□ -0.71
SMG6-218ENST00000575454 CCDC96Q2M329 555 aa10.63□□□□□ -0.71
SMG6-218ENST00000575454 DNERQ8NFT8 737 aa10.63□□□□□ -0.71
SMG6-218ENST00000575454 RAD9AQ99638 391 aa10.63□□□□□ -0.71
SMG6-218ENST00000575454 RANBP17Q9H2T7 1088 aaKnown RBP10.63□□□□□ -0.71
SMG6-218ENST00000575454 MYO9BQ13459 2157 aa10.63□□□□□ -0.71
SMG6-218ENST00000575454 NAV1Q8NEY1 1877 aa10.62□□□□□ -0.71
SMG6-218ENST00000575454 PRR33A8MZF0 331 aa10.62□□□□□ -0.71
SMG6-218ENST00000575454 M0R2C6 588 aa10.62□□□□□ -0.71
SMG6-218ENST00000575454 SMARCA5O60264 1052 aaPredicted RBP10.62□□□□□ -0.71
SMG6-218ENST00000575454 ALADP13716 330 aa10.62□□□□□ -0.71
SMG6-218ENST00000575454 SELPP16109 830 aa10.62□□□□□ -0.71
SMG6-218ENST00000575454 SNAP25P60880 206 aa10.62□□□□□ -0.71
SMG6-218ENST00000575454 PTGISQ16647 500 aa10.62□□□□□ -0.71
SMG6-218ENST00000575454 PUS10Q3MIT2 529 aaKnown RBP10.62□□□□□ -0.71
SMG6-218ENST00000575454 SYDE2Q5VT97 1194 aa10.62□□□□□ -0.71
SMG6-218ENST00000575454 KRT40Q6A162 431 aa10.62□□□□□ -0.71
SMG6-218ENST00000575454 BTNL9Q6UXG8 535 aa10.62□□□□□ -0.71
SMG6-218ENST00000575454 RNF207Q6ZRF8 634 aa10.62□□□□□ -0.71
SMG6-218ENST00000575454 TGS1Q96RS0 853 aaKnown RBP10.62□□□□□ -0.71
SMG6-218ENST00000575454 MAF1Q9H063 256 aa10.62□□□□□ -0.71
SMG6-218ENST00000575454 DDX49Q9Y6V7 483 aaKnown RBP10.62□□□□□ -0.71
SMG6-218ENST00000575454 ABHD14A-ACY1A0A1B0GW23 586 aa10.61□□□□□ -0.71
SMG6-218ENST00000575454 RANBP6O60518 1105 aaKnown RBP10.61□□□□□ -0.71
SMG6-218ENST00000575454 LPXNO60711 386 aa10.61□□□□□ -0.71
SMG6-218ENST00000575454 TXNP10599 105 aaKnown RBP10.61□□□□□ -0.71
SMG6-218ENST00000575454 EDNRBP24530 442 aa10.61□□□□□ -0.71
SMG6-218ENST00000575454 CALML3P27482 149 aa10.61□□□□□ -0.71
SMG6-218ENST00000575454 NOVP48745 357 aa10.61□□□□□ -0.71
SMG6-218ENST00000575454 ERVK-21P61565 698 aa10.61□□□□□ -0.71
SMG6-218ENST00000575454 WDR5P61964 334 aaKnown RBP10.61□□□□□ -0.71
SMG6-218ENST00000575454 LEXMQ3ZCV2 418 aa10.61□□□□□ -0.71
SMG6-218ENST00000575454 CNKSR3Q6P9H4 555 aa10.61□□□□□ -0.71
SMG6-218ENST00000575454 SESTD1Q86VW0 696 aa10.61□□□□□ -0.71
SMG6-218ENST00000575454 GJD3Q8N144 294 aa10.61□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms