RNA–Protein interactions for RNA: ENST00000572656.2

TRAPPC1-205, Transcript of trafficking protein particle complex 1, humanhuman

TSL 2

Gene TRAPPC1, Length 409 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC1-205ENST00000572656 ALDH5A1P51649 535 aaPredicted RBP11.65□□□□□ -0.54
TRAPPC1-205ENST00000572656 MRPS5P82675 430 aaKnown RBP11.65□□□□□ -0.54
TRAPPC1-205ENST00000572656 ALX1Q15699 326 aa11.65□□□□□ -0.54
TRAPPC1-205ENST00000572656 CCDC85BQ15834 202 aaPredicted RBP11.65□□□□□ -0.54
TRAPPC1-205ENST00000572656 VPS53Q5VIR6 699 aa11.65□□□□□ -0.54
TRAPPC1-205ENST00000572656 SYDE2Q5VT97 1194 aa11.65□□□□□ -0.54
TRAPPC1-205ENST00000572656 TTBK2Q6IQ55 1244 aa11.65□□□□□ -0.54
TRAPPC1-205ENST00000572656 VWCEQ96DN2 955 aa11.65□□□□□ -0.54
TRAPPC1-205ENST00000572656 WDR11Q9BZH6 1224 aa11.65□□□□□ -0.54
TRAPPC1-205ENST00000572656 RBM47A0AV96 593 aaKnown RBP11.64□□□□□ -0.55
TRAPPC1-205ENST00000572656 NFIBO00712 420 aa11.64□□□□□ -0.55
TRAPPC1-205ENST00000572656 PFKMP08237 780 aa11.64□□□□□ -0.55
TRAPPC1-205ENST00000572656 TOP1P11387 765 aaKnown RBP11.64□□□□□ -0.55
TRAPPC1-205ENST00000572656 SLC16A2P36021 539 aa11.64□□□□□ -0.55
TRAPPC1-205ENST00000572656 CPT1AP50416 773 aa11.64□□□□□ -0.55
TRAPPC1-205ENST00000572656 RABGGTBP53611 331 aa11.64□□□□□ -0.55
TRAPPC1-205ENST00000572656 PURAQ00577 322 aaKnown RBP11.64□□□□□ -0.55
TRAPPC1-205ENST00000572656 EVI5LQ96CN4 794 aa11.64□□□□□ -0.55
TRAPPC1-205ENST00000572656 SCLYQ96I15 445 aa11.64□□□□□ -0.55
TRAPPC1-205ENST00000572656 TMEM47Q9BQJ4 181 aa11.64□□□□□ -0.55
TRAPPC1-205ENST00000572656 HELLSQ9NRZ9 838 aa11.64□□□□□ -0.55
TRAPPC1-205ENST00000572656 TCP11L1Q9NUJ3 509 aa11.64□□□□□ -0.55
TRAPPC1-205ENST00000572656 TRMT13Q9NUP7 481 aaKnown RBP11.64□□□□□ -0.55
TRAPPC1-205ENST00000572656 PNMA2Q9UL42 364 aa11.64□□□□□ -0.55
TRAPPC1-205ENST00000572656 PCDHA11Q9Y5I1 949 aa11.64□□□□□ -0.55
TRAPPC1-205ENST00000572656 TNKSO95271 1327 aa11.63□□□□□ -0.55
TRAPPC1-205ENST00000572656 SALL3Q9BXA9 1300 aa11.63□□□□□ -0.55
TRAPPC1-205ENST00000572656 TTC28Q96AY4 2481 aa11.63□□□□□ -0.55
TRAPPC1-205ENST00000572656 PTPDC1A2A3K4 754 aa11.63□□□□□ -0.55
TRAPPC1-205ENST00000572656 ZBBXA8MT70 800 aa11.63□□□□□ -0.55
TRAPPC1-205ENST00000572656 MYL3P08590 195 aa11.63□□□□□ -0.55
TRAPPC1-205ENST00000572656 ATP2A2P16615 1042 aaKnown RBP11.63□□□□□ -0.55
TRAPPC1-205ENST00000572656 BRDTQ58F21 947 aaPredicted RBP11.63□□□□□ -0.55
TRAPPC1-205ENST00000572656 PPP2R2DQ66LE6 453 aa11.63□□□□□ -0.55
TRAPPC1-205ENST00000572656 ADAMTS19Q8TE59 1207 aa11.63□□□□□ -0.55
TRAPPC1-205ENST00000572656 CLEC4DQ8WXI8 215 aa11.63□□□□□ -0.55
TRAPPC1-205ENST00000572656 MTG1Q9BT17 334 aaPredicted RBP11.63□□□□□ -0.55
TRAPPC1-205ENST00000572656 GPCPD1Q9NPB8 672 aa11.63□□□□□ -0.55
TRAPPC1-205ENST00000572656 GPHNQ9NQX3 736 aaPredicted RBP11.63□□□□□ -0.55
TRAPPC1-205ENST00000572656 TOMM22Q9NS69 142 aa11.63□□□□□ -0.55
TRAPPC1-205ENST00000572656 FRMPD2Q68DX3 1309 aaPredicted RBP11.62□□□□□ -0.55
TRAPPC1-205ENST00000572656 NKRFO15226 690 aaKnown RBP eCLIP11.62□□□□□ -0.55
TRAPPC1-205ENST00000572656 KPNA6O60684 536 aa11.62□□□□□ -0.55
TRAPPC1-205ENST00000572656 FGAP02671 866 aa11.62□□□□□ -0.55
TRAPPC1-205ENST00000572656 CYP2C9P11712 490 aa11.62□□□□□ -0.55
TRAPPC1-205ENST00000572656 MYOGP15173 224 aa11.62□□□□□ -0.55
TRAPPC1-205ENST00000572656 CALML3P27482 149 aa11.62□□□□□ -0.55
TRAPPC1-205ENST00000572656 PDE4DQ08499 809 aa11.62□□□□□ -0.55
TRAPPC1-205ENST00000572656 TTLL4Q14679 1199 aa11.62□□□□□ -0.55
TRAPPC1-205ENST00000572656 RRP12Q5JTH9 1297 aaKnown RBP11.62□□□□□ -0.55
TRAPPC1-205ENST00000572656 SLC30A10Q6XR72 485 aa11.62□□□□□ -0.55
TRAPPC1-205ENST00000572656 RNF207Q6ZRF8 634 aa11.62□□□□□ -0.55
TRAPPC1-205ENST00000572656 OR6J1Q8NGC5 347 aa11.62□□□□□ -0.55
TRAPPC1-205ENST00000572656 MPHOSPH6Q99547 160 aaKnown RBP11.62□□□□□ -0.55
TRAPPC1-205ENST00000572656 TSPYL2Q9H2G4 693 aaPredicted RBP11.62□□□□□ -0.55
TRAPPC1-205ENST00000572656 ZBTB47Q9UFB7 747 aaPredicted RBP11.62□□□□□ -0.55
TRAPPC1-205ENST00000572656 RAD50Q92878 1312 aa11.61□□□□□ -0.55
TRAPPC1-205ENST00000572656 MYH4Q9Y623 1939 aa11.61□□□□□ -0.55
TRAPPC1-205ENST00000572656 A6NJR5 290 aa11.61□□□□□ -0.55
TRAPPC1-205ENST00000572656 PDHBP11177 359 aa11.61□□□□□ -0.55
TRAPPC1-205ENST00000572656 ACTN1P12814 892 aa11.61□□□□□ -0.55
TRAPPC1-205ENST00000572656 EDNRBP24530 442 aa11.61□□□□□ -0.55
TRAPPC1-205ENST00000572656 RFC2P35250 354 aa11.61□□□□□ -0.55
TRAPPC1-205ENST00000572656 RPS6P62753 249 aaKnown RBP11.61□□□□□ -0.55
TRAPPC1-205ENST00000572656 PTPN11Q06124 597 aaPredicted RBP11.61□□□□□ -0.55
TRAPPC1-205ENST00000572656 ZNF543Q08ER8 600 aa11.61□□□□□ -0.55
TRAPPC1-205ENST00000572656 PPP2R5BQ15173 497 aa11.61□□□□□ -0.55
TRAPPC1-205ENST00000572656 NBPF20Q3BBV1 942 aa11.61□□□□□ -0.55
TRAPPC1-205ENST00000572656 MCMDC2Q4G0Z9 681 aa11.61□□□□□ -0.55
TRAPPC1-205ENST00000572656 TMEM67Q5HYA8 995 aa11.61□□□□□ -0.55
TRAPPC1-205ENST00000572656 ANKRD45Q5TZF3 282 aa11.61□□□□□ -0.55
TRAPPC1-205ENST00000572656 NFRKBQ6P4R8 1299 aa11.61□□□□□ -0.55
TRAPPC1-205ENST00000572656 DEFB128Q7Z7B8 93 aa11.61□□□□□ -0.55
TRAPPC1-205ENST00000572656 TICAM2Q86XR7 235 aa11.61□□□□□ -0.55
TRAPPC1-205ENST00000572656 IL27Q8NEV9 243 aa11.61□□□□□ -0.55
TRAPPC1-205ENST00000572656 DNERQ8NFT8 737 aa11.61□□□□□ -0.55
TRAPPC1-205ENST00000572656 SCFD2Q8WU76 684 aa11.61□□□□□ -0.55
TRAPPC1-205ENST00000572656 TTC14Q96N46 770 aa11.61□□□□□ -0.55
TRAPPC1-205ENST00000572656 UHRF1Q96T88 793 aaPredicted RBP11.61□□□□□ -0.55
TRAPPC1-205ENST00000572656 ZMYM6O95789 1325 aa11.6□□□□□ -0.55
TRAPPC1-205ENST00000572656 WDR19Q8NEZ3 1342 aa11.6□□□□□ -0.55
TRAPPC1-205ENST00000572656 B4DLN1 442 aa11.6□□□□□ -0.55
TRAPPC1-205ENST00000572656 PITPNM1O00562 1244 aa11.6□□□□□ -0.55
TRAPPC1-205ENST00000572656 SNHG28P0DPA3 235 aa11.6□□□□□ -0.55
TRAPPC1-205ENST00000572656 HSPD1P10809 573 aaKnown RBP11.6□□□□□ -0.55
TRAPPC1-205ENST00000572656 POU3F3P20264 500 aaPredicted RBP11.6□□□□□ -0.55
TRAPPC1-205ENST00000572656 COL9A1P20849 921 aa11.6□□□□□ -0.55
TRAPPC1-205ENST00000572656 MRPL12P52815 198 aaKnown RBP11.6□□□□□ -0.55
TRAPPC1-205ENST00000572656 PDE1AP54750 535 aa11.6□□□□□ -0.55
TRAPPC1-205ENST00000572656 FAM47CQ5HY64 1035 aa11.6□□□□□ -0.55
TRAPPC1-205ENST00000572656 RETREG2Q8NC44 543 aa11.6□□□□□ -0.55
TRAPPC1-205ENST00000572656 RGS22Q8NE09 1264 aa11.6□□□□□ -0.55
TRAPPC1-205ENST00000572656 PHOSPHO2Q8TCD6 241 aa11.6□□□□□ -0.55
TRAPPC1-205ENST00000572656 FAM227BQ96M60 508 aa11.6□□□□□ -0.55
TRAPPC1-205ENST00000572656 SLC9A7Q96T83 725 aa11.6□□□□□ -0.55
TRAPPC1-205ENST00000572656 LRRC37A2A6NM11 1700 aa11.6□□□□□ -0.55
TRAPPC1-205ENST00000572656 MUC3AQ02505 3323 aa11.59□□□□□ -0.55
TRAPPC1-205ENST00000572656 A0A0D9SFI3 127 aa11.59□□□□□ -0.55
TRAPPC1-205ENST00000572656 CA3P07451 260 aa11.59□□□□□ -0.55
TRAPPC1-205ENST00000572656 IQCF3P0C7M6 154 aa11.59□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms