RNA–Protein interactions for RNA: ENST00000570828.5

CTDNEP1-205, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 3

Gene CTDNEP1, Length 986 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-205ENST00000570828 PNMA2Q9UL42 364 aa14.5□□□□□ -0.09
CTDNEP1-205ENST00000570828 PLXNA1Q9UIW2 1896 aa14.49□□□□□ -0.09
CTDNEP1-205ENST00000570828 SOWAHBA6NEL2 793 aa14.49□□□□□ -0.09
CTDNEP1-205ENST00000570828 MOXD2PA6NHM9 499 aa14.49□□□□□ -0.09
CTDNEP1-205ENST00000570828 SOX1O00570 391 aaPredicted RBP14.49□□□□□ -0.09
CTDNEP1-205ENST00000570828 C6orf222P0C671 652 aaPredicted RBP14.49□□□□□ -0.09
CTDNEP1-205ENST00000570828 SNHG28P0DPA3 235 aa14.49□□□□□ -0.09
CTDNEP1-205ENST00000570828 ACLYP53396 1101 aa14.49□□□□□ -0.09
CTDNEP1-205ENST00000570828 ARSIQ5FYB1 569 aa14.49□□□□□ -0.09
CTDNEP1-205ENST00000570828 PNMA1Q8ND90 353 aa14.49□□□□□ -0.09
CTDNEP1-205ENST00000570828 NUP133Q8WUM0 1156 aa14.49□□□□□ -0.09
CTDNEP1-205ENST00000570828 ZSCAN10Q96SZ4 725 aaPredicted RBP14.49□□□□□ -0.09
CTDNEP1-205ENST00000570828 UBAC1Q9BSL1 405 aa14.49□□□□□ -0.09
CTDNEP1-205ENST00000570828 KRT23Q9C075 422 aa14.49□□□□□ -0.09
CTDNEP1-205ENST00000570828 STARD7Q9NQZ5 370 aa14.49□□□□□ -0.09
CTDNEP1-205ENST00000570828 TNKSO95271 1327 aa14.48□□□□□ -0.09
CTDNEP1-205ENST00000570828 WDR19Q8NEZ3 1342 aa14.48□□□□□ -0.09
CTDNEP1-205ENST00000570828 CST5P28325 142 aaPredicted RBP14.48□□□□□ -0.09
CTDNEP1-205ENST00000570828 TLE2Q04725 743 aa14.48□□□□□ -0.09
CTDNEP1-205ENST00000570828 LRIT3Q3SXY7 679 aa14.48□□□□□ -0.09
CTDNEP1-205ENST00000570828 NOL8Q76FK4 1167 aaKnown RBP14.48□□□□□ -0.09
CTDNEP1-205ENST00000570828 KLHDC9Q8NEP7 349 aa14.48□□□□□ -0.09
CTDNEP1-205ENST00000570828 LRCH3Q96II8 777 aa14.48□□□□□ -0.09
CTDNEP1-205ENST00000570828 KATNBL1Q9H079 304 aa14.48□□□□□ -0.09
CTDNEP1-205ENST00000570828 IL25Q9H293 177 aa14.48□□□□□ -0.09
CTDNEP1-205ENST00000570828 PDLIM7Q9NR12 457 aa14.48□□□□□ -0.09
CTDNEP1-205ENST00000570828 ADD3Q9UEY8 706 aaKnown RBP14.48□□□□□ -0.09
CTDNEP1-205ENST00000570828 LAMA4Q16363 1823 aa14.48□□□□□ -0.09
CTDNEP1-205ENST00000570828 ASTN1O14525 1302 aa14.47□□□□□ -0.09
CTDNEP1-205ENST00000570828 ZNFX1Q9P2E3 1918 aaKnown RBP14.47□□□□□ -0.09
CTDNEP1-205ENST00000570828 PTPDC1A2A3K4 754 aa14.47□□□□□ -0.09
CTDNEP1-205ENST00000570828 MYADML2A6NDP7 307 aa14.47□□□□□ -0.09
CTDNEP1-205ENST00000570828 NFIBO00712 420 aa14.47□□□□□ -0.09
CTDNEP1-205ENST00000570828 ADCY6O43306 1168 aa14.47□□□□□ -0.09
CTDNEP1-205ENST00000570828 PQBP1O60828 265 aaKnown RBP14.47□□□□□ -0.09
CTDNEP1-205ENST00000570828 GOLGA8HP0CJ92 632 aa14.47□□□□□ -0.09
CTDNEP1-205ENST00000570828 GJA9P57773 515 aa14.47□□□□□ -0.09
CTDNEP1-205ENST00000570828 TNFAIP2Q03169 654 aa14.47□□□□□ -0.09
CTDNEP1-205ENST00000570828 BAATQ14032 418 aaPredicted RBP14.47□□□□□ -0.09
CTDNEP1-205ENST00000570828 KCNA10Q16322 511 aa14.47□□□□□ -0.09
CTDNEP1-205ENST00000570828 ASPRV1Q53RT3 343 aa14.47□□□□□ -0.09
CTDNEP1-205ENST00000570828 ENAHQ8N8S7 591 aaPredicted RBP14.47□□□□□ -0.09
CTDNEP1-205ENST00000570828 PCSK9Q8NBP7 692 aaKnown RBP14.47□□□□□ -0.09
CTDNEP1-205ENST00000570828 GLT1D1Q96MS3 346 aa14.47□□□□□ -0.09
CTDNEP1-205ENST00000570828 UPF3AQ9H1J1 476 aaKnown RBP14.47□□□□□ -0.09
CTDNEP1-205ENST00000570828 ZSWIM5Q9P217 1185 aa14.47□□□□□ -0.09
CTDNEP1-205ENST00000570828 CLTBP09497 229 aa14.46□□□□□ -0.09
CTDNEP1-205ENST00000570828 CHMLP26374 656 aa14.46□□□□□ -0.09
CTDNEP1-205ENST00000570828 TRDNQ13061 729 aa14.46□□□□□ -0.09
CTDNEP1-205ENST00000570828 GNASQ5JWF2 1037 aa14.46□□□□□ -0.09
CTDNEP1-205ENST00000570828 CCSAPQ6IQ19 270 aaPredicted RBP14.46□□□□□ -0.09
CTDNEP1-205ENST00000570828 EEPD1Q7L9B9 569 aa14.46□□□□□ -0.09
CTDNEP1-205ENST00000570828 FBXO16Q8IX29 292 aaPredicted RBP14.46□□□□□ -0.09
CTDNEP1-205ENST00000570828 ANKS1AQ92625 1134 aa14.46□□□□□ -0.09
CTDNEP1-205ENST00000570828 DDX49Q9Y6V7 483 aaKnown RBP14.46□□□□□ -0.09
CTDNEP1-205ENST00000570828 C11orf97A0A1B0GVM6 126 aaPredicted RBP14.45□□□□□ -0.1
CTDNEP1-205ENST00000570828 DCDC2CA8MYV0 355 aa14.45□□□□□ -0.1
CTDNEP1-205ENST00000570828 DHX16O60231 1041 aaKnown RBP14.45□□□□□ -0.1
CTDNEP1-205ENST00000570828 ASGR1P07306 291 aa14.45□□□□□ -0.1
CTDNEP1-205ENST00000570828 PARP1P09874 1014 aaKnown RBP14.45□□□□□ -0.1
CTDNEP1-205ENST00000570828 CALML3P27482 149 aa14.45□□□□□ -0.1
CTDNEP1-205ENST00000570828 ALDH5A1P51649 535 aaPredicted RBP14.45□□□□□ -0.1
CTDNEP1-205ENST00000570828 CDC37Q16543 378 aaPredicted RBP14.45□□□□□ -0.1
CTDNEP1-205ENST00000570828 IFIT1BQ5T764 474 aaKnown RBP14.45□□□□□ -0.1
CTDNEP1-205ENST00000570828 SLC30A10Q6XR72 485 aa14.45□□□□□ -0.1
CTDNEP1-205ENST00000570828 RNF207Q6ZRF8 634 aa14.45□□□□□ -0.1
CTDNEP1-205ENST00000570828 TLK2Q86UE8 772 aa14.45□□□□□ -0.1
CTDNEP1-205ENST00000570828 CLEC4DQ8WXI8 215 aa14.45□□□□□ -0.1
CTDNEP1-205ENST00000570828 VTI1AQ96AJ9 217 aa14.45□□□□□ -0.1
CTDNEP1-205ENST00000570828 PURBQ96QR8 312 aaKnown RBP14.45□□□□□ -0.1
CTDNEP1-205ENST00000570828 MPHOSPH6Q99547 160 aaKnown RBP14.45□□□□□ -0.1
CTDNEP1-205ENST00000570828 UBA5Q9GZZ9 404 aa14.45□□□□□ -0.1
CTDNEP1-205ENST00000570828 CPVLQ9H3G5 476 aa14.45□□□□□ -0.1
CTDNEP1-205ENST00000570828 VTA1Q9NP79 307 aa14.45□□□□□ -0.1
CTDNEP1-205ENST00000570828 ELP1O95163 1332 aa14.44□□□□□ -0.1
CTDNEP1-205ENST00000570828 MROH7Q68CQ1 1323 aa14.44□□□□□ -0.1
CTDNEP1-205ENST00000570828 LOC102724159A0A0B4J2E5 919 aa14.44□□□□□ -0.1
CTDNEP1-205ENST00000570828 TRIM43BA6NCK2 446 aa14.44□□□□□ -0.1
CTDNEP1-205ENST00000570828 RIOK3O14730 519 aaKnown RBP14.44□□□□□ -0.1
CTDNEP1-205ENST00000570828 PWP2Q15269 919 aaKnown RBP14.44□□□□□ -0.1
CTDNEP1-205ENST00000570828 USH1GQ495M9 461 aa14.44□□□□□ -0.1
CTDNEP1-205ENST00000570828 ANKRD33Q7Z3H0 272 aa14.44□□□□□ -0.1
CTDNEP1-205ENST00000570828 SH3RF1Q7Z6J0 888 aa14.44□□□□□ -0.1
CTDNEP1-205ENST00000570828 MORC4Q8TE76 937 aa14.44□□□□□ -0.1
CTDNEP1-205ENST00000570828 BADQ92934 168 aa14.44□□□□□ -0.1
CTDNEP1-205ENST00000570828 TRIM43Q96BQ3 446 aaPredicted RBP14.44□□□□□ -0.1
CTDNEP1-205ENST00000570828 AP5M1Q9H0R1 490 aa14.44□□□□□ -0.1
CTDNEP1-205ENST00000570828 TMEM39AQ9NV64 488 aa14.44□□□□□ -0.1
CTDNEP1-205ENST00000570828 LAMA2P24043 3122 aaKnown RBP14.43□□□□□ -0.1
CTDNEP1-205ENST00000570828 A0A0U1RQG5 324 aaPredicted RBP14.43□□□□□ -0.1
CTDNEP1-205ENST00000570828 SGSM2O43147 1006 aa14.43□□□□□ -0.1
CTDNEP1-205ENST00000570828 RAG1P15918 1043 aa14.43□□□□□ -0.1
CTDNEP1-205ENST00000570828 SMPD1P17405 629 aa14.43□□□□□ -0.1
CTDNEP1-205ENST00000570828 RPS6P62753 249 aaKnown RBP14.43□□□□□ -0.1
CTDNEP1-205ENST00000570828 NKX3-2P78367 333 aa14.43□□□□□ -0.1
CTDNEP1-205ENST00000570828 BEX3Q00994 111 aa14.43□□□□□ -0.1
CTDNEP1-205ENST00000570828 PTH1RQ03431 593 aa14.43□□□□□ -0.1
CTDNEP1-205ENST00000570828 FSCN1Q16658 493 aaKnown RBP14.43□□□□□ -0.1
CTDNEP1-205ENST00000570828 IQSEC1Q6DN90 963 aa14.43□□□□□ -0.1
CTDNEP1-205ENST00000570828 TAPT1Q6NXT6 567 aa14.43□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms