RNA–Protein interactions for RNA: ENST00000570273.5

HERPUD1-219, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 1 (best)

Gene HERPUD1, Length 1,425 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-219ENST00000570273 RBPJLQ9UBG7 517 aa17.63■□□□□ 0.41
HERPUD1-219ENST00000570273 RIPK3Q9Y572 518 aa17.63■□□□□ 0.41
HERPUD1-219ENST00000570273 PIK3CDO00329 1044 aa17.62■□□□□ 0.41
HERPUD1-219ENST00000570273 MEIS2O14770 477 aa17.62■□□□□ 0.41
HERPUD1-219ENST00000570273 COPB2P35606 906 aa17.62■□□□□ 0.41
HERPUD1-219ENST00000570273 TAF1CQ15572 869 aaPredicted RBP17.62■□□□□ 0.41
HERPUD1-219ENST00000570273 MCTP2Q6DN12 878 aa17.62■□□□□ 0.41
HERPUD1-219ENST00000570273 NSMFQ6X4W1 530 aa17.62■□□□□ 0.41
HERPUD1-219ENST00000570273 ZIC5Q96T25 663 aa17.62■□□□□ 0.41
HERPUD1-219ENST00000570273 CNPY2Q9Y2B0 182 aa17.62■□□□□ 0.41
HERPUD1-219ENST00000570273 SPDYE3A6NKU9 549 aa17.61■□□□□ 0.41
HERPUD1-219ENST00000570273 AOC2O75106 756 aa17.61■□□□□ 0.41
HERPUD1-219ENST00000570273 ATP2B1P20020 1258 aa17.61■□□□□ 0.41
HERPUD1-219ENST00000570273 ERVK-9P63128 1117 aa17.61■□□□□ 0.41
HERPUD1-219ENST00000570273 ERVK-24P63145 666 aa17.61■□□□□ 0.41
HERPUD1-219ENST00000570273 INF2Q27J81 1249 aa17.61■□□□□ 0.41
HERPUD1-219ENST00000570273 RILPL1Q5EBL4 403 aa17.61■□□□□ 0.41
HERPUD1-219ENST00000570273 ATL3Q6DD88 541 aa17.61■□□□□ 0.41
HERPUD1-219ENST00000570273 CLEC17AQ6ZS10 378 aa17.61■□□□□ 0.41
HERPUD1-219ENST00000570273 NCAPG2Q86XI2 1143 aa17.61■□□□□ 0.41
HERPUD1-219ENST00000570273 JMYQ8N9B5 988 aa17.61■□□□□ 0.41
HERPUD1-219ENST00000570273 CHST13Q8NET6 341 aa17.61■□□□□ 0.41
HERPUD1-219ENST00000570273 TBC1D5Q92609 795 aa17.61■□□□□ 0.41
HERPUD1-219ENST00000570273 MOV10L1Q9BXT6 1211 aaKnown RBP17.61■□□□□ 0.41
HERPUD1-219ENST00000570273 ANO3Q9BYT9 981 aa17.61■□□□□ 0.41
HERPUD1-219ENST00000570273 FBXO40Q9UH90 709 aa17.61■□□□□ 0.41
HERPUD1-219ENST00000570273 FIBPO43427 364 aa17.6■□□□□ 0.41
HERPUD1-219ENST00000570273 SLC25A27O95847 323 aa17.6■□□□□ 0.41
HERPUD1-219ENST00000570273 FOSP01100 380 aaPredicted RBP17.6■□□□□ 0.41
HERPUD1-219ENST00000570273 VEGFBP49765 207 aa17.6■□□□□ 0.41
HERPUD1-219ENST00000570273 HSD17B4P51659 736 aa17.6■□□□□ 0.41
HERPUD1-219ENST00000570273 CEBPZQ03701 1054 aaKnown RBP17.6■□□□□ 0.41
HERPUD1-219ENST00000570273 FCHSD1Q86WN1 690 aa17.6■□□□□ 0.41
HERPUD1-219ENST00000570273 ANKRD13CQ8N6S4 541 aa17.6■□□□□ 0.41
HERPUD1-219ENST00000570273 USP28Q96RU2 1077 aa17.6■□□□□ 0.41
HERPUD1-219ENST00000570273 FTOQ9C0B1 505 aaKnown RBP eCLIP17.6■□□□□ 0.41
HERPUD1-219ENST00000570273 TFIP11Q9UBB9 837 aaKnown RBP17.6■□□□□ 0.41
HERPUD1-219ENST00000570273 RBBP6Q7Z6E9 1792 aaKnown RBP17.6■□□□□ 0.41
HERPUD1-219ENST00000570273 ERCC3P19447 782 aa17.59■□□□□ 0.41
HERPUD1-219ENST00000570273 TRAPPC10P48553 1259 aa17.59■□□□□ 0.41
HERPUD1-219ENST00000570273 CCNA1P78396 465 aa17.59■□□□□ 0.41
HERPUD1-219ENST00000570273 GHRHRQ02643 423 aa17.59■□□□□ 0.41
HERPUD1-219ENST00000570273 NBR1Q14596 966 aa17.59■□□□□ 0.41
HERPUD1-219ENST00000570273 TTC38Q5R3I4 469 aa17.59■□□□□ 0.41
HERPUD1-219ENST00000570273 SLC30A10Q6XR72 485 aa17.59■□□□□ 0.41
HERPUD1-219ENST00000570273 RNF207Q6ZRF8 634 aa17.59■□□□□ 0.41
HERPUD1-219ENST00000570273 SAMD3Q8N6K7 520 aa17.59■□□□□ 0.41
HERPUD1-219ENST00000570273 GPRC5AQ8NFJ5 357 aa17.59■□□□□ 0.41
HERPUD1-219ENST00000570273 TBCKQ8TEA7 893 aa17.59■□□□□ 0.41
HERPUD1-219ENST00000570273 EHMT1Q9H9B1 1298 aa17.59■□□□□ 0.41
HERPUD1-219ENST00000570273 MORF4L1Q9UBU8 362 aa17.59■□□□□ 0.41
HERPUD1-219ENST00000570273 CFAP45Q9UL16 551 aa17.59■□□□□ 0.41
HERPUD1-219ENST00000570273 MYH15Q9Y2K3 1946 aa17.58■□□□□ 0.41
HERPUD1-219ENST00000570273 GOLGA6L22H0YM25 854 aa17.58■□□□□ 0.41
HERPUD1-219ENST00000570273 TM4SF4P48230 202 aa17.58■□□□□ 0.41
HERPUD1-219ENST00000570273 TOB1P50616 345 aaPredicted RBP17.58■□□□□ 0.41
HERPUD1-219ENST00000570273 Q3C1V9 767 aa17.58■□□□□ 0.41
HERPUD1-219ENST00000570273 WDR78Q5VTH9 848 aa17.58■□□□□ 0.41
HERPUD1-219ENST00000570273 ANO1Q5XXA6 986 aa17.58■□□□□ 0.41
HERPUD1-219ENST00000570273 NEK8Q86SG6 692 aa17.58■□□□□ 0.41
HERPUD1-219ENST00000570273 GDPD2Q9HCC8 539 aa17.58■□□□□ 0.41
HERPUD1-219ENST00000570273 ZFYVE28Q9HCC9 887 aa17.58■□□□□ 0.41
HERPUD1-219ENST00000570273 ADGRA2Q96PE1 1338 aa17.58■□□□□ 0.4
HERPUD1-219ENST00000570273 SMCHD1A6NHR9 2005 aa17.58■□□□□ 0.4
HERPUD1-219ENST00000570273 RPS6P62753 249 aaKnown RBP17.57■□□□□ 0.4
HERPUD1-219ENST00000570273 STK38Q15208 465 aa17.57■□□□□ 0.4
HERPUD1-219ENST00000570273 FAM110CQ1W6H9 321 aa17.57■□□□□ 0.4
HERPUD1-219ENST00000570273 LETM2Q2VYF4 491 aa17.57■□□□□ 0.4
HERPUD1-219ENST00000570273 SHCBP1Q8NEM2 672 aa17.57■□□□□ 0.4
HERPUD1-219ENST00000570273 SYTL5Q8TDW5 730 aaPredicted RBP17.57■□□□□ 0.4
HERPUD1-219ENST00000570273 SPATA32Q96LK8 384 aa17.57■□□□□ 0.4
HERPUD1-219ENST00000570273 SCAND2PQ9GZW5 306 aaPredicted RBP17.57■□□□□ 0.4
HERPUD1-219ENST00000570273 A1CFQ9NQ94 594 aaKnown RBP17.57■□□□□ 0.4
HERPUD1-219ENST00000570273 POLR3EQ9NVU0 708 aa17.57■□□□□ 0.4
HERPUD1-219ENST00000570273 MAP3K20Q9NYL2 800 aaKnown RBP17.57■□□□□ 0.4
HERPUD1-219ENST00000570273 RTEL1Q9NZ71 1219 aa17.57■□□□□ 0.4
HERPUD1-219ENST00000570273 CPA4Q9UI42 421 aa17.57■□□□□ 0.4
HERPUD1-219ENST00000570273 CLIC4Q9Y696 253 aa17.57■□□□□ 0.4
HERPUD1-219ENST00000570273 PFASO15067 1338 aa17.56■□□□□ 0.4
HERPUD1-219ENST00000570273 WNT7AO00755 349 aa17.56■□□□□ 0.4
HERPUD1-219ENST00000570273 NASPP49321 788 aaPredicted RBP17.56■□□□□ 0.4
HERPUD1-219ENST00000570273 BAATQ14032 418 aaPredicted RBP17.56■□□□□ 0.4
HERPUD1-219ENST00000570273 SF3A1Q15459 793 aaKnown RBP17.56■□□□□ 0.4
HERPUD1-219ENST00000570273 CSPP1Q1MSJ5 1256 aa17.56■□□□□ 0.4
HERPUD1-219ENST00000570273 CCAR1Q8IX12 1150 aaKnown RBP17.56■□□□□ 0.4
HERPUD1-219ENST00000570273 REM2Q8IYK8 340 aaPredicted RBP17.56■□□□□ 0.4
HERPUD1-219ENST00000570273 ANKRD35Q8N283 1001 aa17.56■□□□□ 0.4
HERPUD1-219ENST00000570273 MAF1Q9H063 256 aa17.56■□□□□ 0.4
HERPUD1-219ENST00000570273 MROH8Q9H579 483 aa17.56■□□□□ 0.4
HERPUD1-219ENST00000570273 COL20A1Q9P218 1284 aa17.56■□□□□ 0.4
HERPUD1-219ENST00000570273 PCDHB6Q9Y5E3 794 aa17.56■□□□□ 0.4
HERPUD1-219ENST00000570273 YEATS4O95619 227 aa17.55■□□□□ 0.4
HERPUD1-219ENST00000570273 ALDH1A1P00352 501 aa17.55■□□□□ 0.4
HERPUD1-219ENST00000570273 MCM4P33991 863 aa17.55■□□□□ 0.4
HERPUD1-219ENST00000570273 SREBF1P36956 1147 aa17.55■□□□□ 0.4
HERPUD1-219ENST00000570273 ZNF174Q15697 407 aa17.55■□□□□ 0.4
HERPUD1-219ENST00000570273 LEO1Q8WVC0 666 aaPredicted RBP17.55■□□□□ 0.4
HERPUD1-219ENST00000570273 PORCNQ9H237 461 aa17.55■□□□□ 0.4
HERPUD1-219ENST00000570273 CYP39A1Q9NYL5 469 aa17.55■□□□□ 0.4
HERPUD1-219ENST00000570273 CEP131Q9UPN4 1083 aa17.55■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 91.3 ms