RNA–Protein interactions for RNA: ENST00000569990.2

HCCAT5-201, hepatocellular carcinoma associated transcript 5, humanhuman

TSL 1 (best) BASIC

Gene HCCAT5, Length 1,079 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCCAT5-201ENST00000569990 SRBD1Q8N5C6 995 aaKnown RBP11.13□□□□□ -0.63
HCCAT5-201ENST00000569990 IL17RAQ96F46 866 aa11.13□□□□□ -0.63
HCCAT5-201ENST00000569990 PIGSQ96S52 555 aa11.13□□□□□ -0.63
HCCAT5-201ENST00000569990 AMNQ9BXJ7 453 aa11.13□□□□□ -0.63
HCCAT5-201ENST00000569990 UPF3BQ9BZI7 483 aaKnown RBP11.13□□□□□ -0.63
HCCAT5-201ENST00000569990 XRN2Q9H0D6 950 aaKnown RBP eCLIP11.13□□□□□ -0.63
HCCAT5-201ENST00000569990 CYP46A1Q9Y6A2 500 aa11.13□□□□□ -0.63
HCCAT5-201ENST00000569990 SMCHD1A6NHR9 2005 aa11.13□□□□□ -0.63
HCCAT5-201ENST00000569990 ZNFX1Q9P2E3 1918 aaKnown RBP11.12□□□□□ -0.63
HCCAT5-201ENST00000569990 PNMA6FA0A0J9YX94 578 aa11.12□□□□□ -0.63
HCCAT5-201ENST00000569990 SOWAHBA6NEL2 793 aa11.12□□□□□ -0.63
HCCAT5-201ENST00000569990 CYBAP13498 195 aa11.12□□□□□ -0.63
HCCAT5-201ENST00000569990 EN2P19622 333 aaPredicted RBP11.12□□□□□ -0.63
HCCAT5-201ENST00000569990 CCND3P30281 292 aaPredicted RBP11.12□□□□□ -0.63
HCCAT5-201ENST00000569990 GJA8P48165 433 aa11.12□□□□□ -0.63
HCCAT5-201ENST00000569990 EVCP57679 992 aa11.12□□□□□ -0.63
HCCAT5-201ENST00000569990 BAATQ14032 418 aaPredicted RBP11.12□□□□□ -0.63
HCCAT5-201ENST00000569990 TOB2Q14106 344 aaPredicted RBP11.12□□□□□ -0.63
HCCAT5-201ENST00000569990 RTN1Q16799 776 aa11.12□□□□□ -0.63
HCCAT5-201ENST00000569990 IER5LQ5T953 404 aa11.12□□□□□ -0.63
HCCAT5-201ENST00000569990 MAMDC4Q6UXC1 1216 aa11.12□□□□□ -0.63
HCCAT5-201ENST00000569990 SLC30A10Q6XR72 485 aa11.12□□□□□ -0.63
HCCAT5-201ENST00000569990 CMTR1Q8N1G2 835 aaKnown RBP11.12□□□□□ -0.63
HCCAT5-201ENST00000569990 MSL3Q8N5Y2 521 aaKnown RBP11.12□□□□□ -0.63
HCCAT5-201ENST00000569990 TRPV1Q8NER1 839 aa11.12□□□□□ -0.63
HCCAT5-201ENST00000569990 DEFB118Q96PH6 123 aa11.12□□□□□ -0.63
HCCAT5-201ENST00000569990 TINF2Q9BSI4 451 aa11.12□□□□□ -0.63
HCCAT5-201ENST00000569990 FAM217BQ9NTX9 383 aaPredicted RBP11.12□□□□□ -0.63
HCCAT5-201ENST00000569990 RBM28Q9NW13 759 aaKnown RBP11.12□□□□□ -0.63
HCCAT5-201ENST00000569990 MRPL11Q9Y3B7 192 aaKnown RBP11.12□□□□□ -0.63
HCCAT5-201ENST00000569990 NID2Q14112 1375 aa11.12□□□□□ -0.63
HCCAT5-201ENST00000569990 PLXNA1Q9UIW2 1896 aa11.12□□□□□ -0.63
HCCAT5-201ENST00000569990 ASTN1O14525 1302 aa11.11□□□□□ -0.63
HCCAT5-201ENST00000569990 SYNGAP1Q96PV0 1343 aa11.11□□□□□ -0.63
HCCAT5-201ENST00000569990 KIAA0100Q14667 2235 aaKnown RBP11.11□□□□□ -0.63
HCCAT5-201ENST00000569990 GOLGA8AA7E2F4 631 aa11.11□□□□□ -0.63
HCCAT5-201ENST00000569990 GOLGA8BA8MQT2 603 aa11.11□□□□□ -0.63
HCCAT5-201ENST00000569990 OPLAHO14841 1288 aa11.11□□□□□ -0.63
HCCAT5-201ENST00000569990 SGPL1O95470 568 aa11.11□□□□□ -0.63
HCCAT5-201ENST00000569990 CDC27P30260 824 aa11.11□□□□□ -0.63
HCCAT5-201ENST00000569990 RGS19P49795 217 aa11.11□□□□□ -0.63
HCCAT5-201ENST00000569990 RPS6P62753 249 aaKnown RBP11.11□□□□□ -0.63
HCCAT5-201ENST00000569990 RNF207Q6ZRF8 634 aa11.11□□□□□ -0.63
HCCAT5-201ENST00000569990 RGS22Q8NE09 1264 aa11.11□□□□□ -0.63
HCCAT5-201ENST00000569990 U2AF1L4Q8WU68 220 aaKnown RBP11.11□□□□□ -0.63
HCCAT5-201ENST00000569990 PIBF1Q8WXW3 757 aa11.11□□□□□ -0.63
HCCAT5-201ENST00000569990 SHISA4Q96DD7 197 aa11.11□□□□□ -0.63
HCCAT5-201ENST00000569990 RRP36Q96EU6 259 aaKnown RBP11.11□□□□□ -0.63
HCCAT5-201ENST00000569990 PURBQ96QR8 312 aaKnown RBP11.11□□□□□ -0.63
HCCAT5-201ENST00000569990 MAF1Q9H063 256 aa11.11□□□□□ -0.63
HCCAT5-201ENST00000569990 NRBP1Q9UHY1 535 aa11.11□□□□□ -0.63
HCCAT5-201ENST00000569990 NAP1L2Q9ULW6 460 aaPredicted RBP11.11□□□□□ -0.63
HCCAT5-201ENST00000569990 PCDHA1Q9Y5I3 950 aa11.11□□□□□ -0.63
HCCAT5-201ENST00000569990 CNTNAP5Q8WYK1 1306 aa11.1□□□□□ -0.63
HCCAT5-201ENST00000569990 PTPDC1A2A3K4 754 aa11.1□□□□□ -0.63
HCCAT5-201ENST00000569990 SNAI1O95863 264 aaPredicted RBP11.1□□□□□ -0.63
HCCAT5-201ENST00000569990 METAP2P50579 478 aaKnown RBP eCLIP11.1□□□□□ -0.63
HCCAT5-201ENST00000569990 GHRHRQ02643 423 aa11.1□□□□□ -0.63
HCCAT5-201ENST00000569990 FUT2Q10981 343 aa11.1□□□□□ -0.63
HCCAT5-201ENST00000569990 TRAF1Q13077 416 aa11.1□□□□□ -0.63
HCCAT5-201ENST00000569990 PPP2R5BQ15173 497 aa11.1□□□□□ -0.63
HCCAT5-201ENST00000569990 PRAMEF19Q5SWL8 479 aa11.1□□□□□ -0.63
HCCAT5-201ENST00000569990 MCF2L2Q86YR7 1114 aa11.1□□□□□ -0.63
HCCAT5-201ENST00000569990 CCDC82Q8N4S0 544 aa11.1□□□□□ -0.63
HCCAT5-201ENST00000569990 TBC1D5Q92609 795 aa11.1□□□□□ -0.63
HCCAT5-201ENST00000569990 CRISPLD2Q9H0B8 497 aa11.1□□□□□ -0.63
HCCAT5-201ENST00000569990 PDRG1Q9NUG6 133 aa11.1□□□□□ -0.63
HCCAT5-201ENST00000569990 SEC63Q9UGP8 760 aaKnown RBP11.1□□□□□ -0.63
HCCAT5-201ENST00000569990 LCTP09848 1927 aa11.09□□□□□ -0.63
HCCAT5-201ENST00000569990 BAZ2BQ9UIF8 2168 aaKnown RBP11.09□□□□□ -0.63
HCCAT5-201ENST00000569990 CCDC196A0A1B0GTZ2 297 aa11.09□□□□□ -0.63
HCCAT5-201ENST00000569990 ASB14A6NK59 587 aa11.09□□□□□ -0.63
HCCAT5-201ENST00000569990 SEPT4O43236 478 aa11.09□□□□□ -0.63
HCCAT5-201ENST00000569990 ZNF865P0CJ78 1059 aaPredicted RBP11.09□□□□□ -0.63
HCCAT5-201ENST00000569990 CAPN2P17655 700 aa11.09□□□□□ -0.63
HCCAT5-201ENST00000569990 CALML3P27482 149 aa11.09□□□□□ -0.63
HCCAT5-201ENST00000569990 CNGA1P29973 690 aa11.09□□□□□ -0.63
HCCAT5-201ENST00000569990 PDIA3P30101 505 aaKnown RBP11.09□□□□□ -0.63
HCCAT5-201ENST00000569990 ADD1P35611 737 aaKnown RBP11.09□□□□□ -0.63
HCCAT5-201ENST00000569990 NUBP1P53384 320 aa11.09□□□□□ -0.63
HCCAT5-201ENST00000569990 ARMCX2Q7L311 632 aa11.09□□□□□ -0.63
HCCAT5-201ENST00000569990 MORC4Q8TE76 937 aa11.09□□□□□ -0.63
HCCAT5-201ENST00000569990 CDKN2AIPQ9NXV6 580 aaPredicted RBP11.09□□□□□ -0.63
HCCAT5-201ENST00000569990 COL20A1Q9P218 1284 aa11.09□□□□□ -0.63
HCCAT5-201ENST00000569990 ADD3Q9UEY8 706 aaKnown RBP11.09□□□□□ -0.63
HCCAT5-201ENST00000569990 DDX20Q9UHI6 824 aaKnown RBP11.09□□□□□ -0.63
HCCAT5-201ENST00000569990 CNPY2Q9Y2B0 182 aa11.09□□□□□ -0.63
HCCAT5-201ENST00000569990 MYH6P13533 1939 aa11.09□□□□□ -0.63
HCCAT5-201ENST00000569990 LOC102724159A0A0B4J2E5 919 aa11.08□□□□□ -0.64
HCCAT5-201ENST00000569990 hCG_1642624A0A1W2PR95 340 aa11.08□□□□□ -0.64
HCCAT5-201ENST00000569990 MSCO60682 206 aa11.08□□□□□ -0.64
HCCAT5-201ENST00000569990 CFBP00751 764 aa11.08□□□□□ -0.64
HCCAT5-201ENST00000569990 TFRCP02786 760 aaKnown RBP11.08□□□□□ -0.64
HCCAT5-201ENST00000569990 ALDH5A1P51649 535 aaPredicted RBP11.08□□□□□ -0.64
HCCAT5-201ENST00000569990 HSD17B4P51659 736 aa11.08□□□□□ -0.64
HCCAT5-201ENST00000569990 ACVR2BQ13705 512 aa11.08□□□□□ -0.64
HCCAT5-201ENST00000569990 PWP2Q15269 919 aaKnown RBP11.08□□□□□ -0.64
HCCAT5-201ENST00000569990 SAMD3Q8N6K7 520 aa11.08□□□□□ -0.64
HCCAT5-201ENST00000569990 DNERQ8NFT8 737 aa11.08□□□□□ -0.64
HCCAT5-201ENST00000569990 SYTL5Q8TDW5 730 aaPredicted RBP11.08□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms