RNA–Protein interactions for RNA: ENST00000569895.3

RBFOX1-219, Transcript of RNA binding fox-1 homolog 1, humanhuman

TSL 3

Gene RBFOX1, Length 829 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX1-219ENST00000569895 ITGB8P26012 769 aa26.36■■□□□ 1.81
RBFOX1-219ENST00000569895 C9orf50Q5SZB4 431 aa26.36■■□□□ 1.81
RBFOX1-219ENST00000569895 ENAHQ8N8S7 591 aaPredicted RBP26.36■■□□□ 1.81
RBFOX1-219ENST00000569895 RGS22Q8NE09 1264 aa26.36■■□□□ 1.81
RBFOX1-219ENST00000569895 DNERQ8NFT8 737 aa26.36■■□□□ 1.81
RBFOX1-219ENST00000569895 TNKSO95271 1327 aa26.36■■□□□ 1.81
RBFOX1-219ENST00000569895 PARP1P09874 1014 aaKnown RBP26.35■■□□□ 1.81
RBFOX1-219ENST00000569895 GSPT1P15170 499 aaKnown RBP26.35■■□□□ 1.81
RBFOX1-219ENST00000569895 RPS6P62753 249 aaKnown RBP26.35■■□□□ 1.81
RBFOX1-219ENST00000569895 TRDNQ13061 729 aa26.35■■□□□ 1.81
RBFOX1-219ENST00000569895 DUSP28Q4G0W2 176 aa26.35■■□□□ 1.81
RBFOX1-219ENST00000569895 LTBP2Q14767 1821 aa26.35■■□□□ 1.81
RBFOX1-219ENST00000569895 PDE4DQ08499 809 aa26.34■■□□□ 1.81
RBFOX1-219ENST00000569895 USH1GQ495M9 461 aa26.34■■□□□ 1.81
RBFOX1-219ENST00000569895 IFIT1BQ5T764 474 aaKnown RBP26.34■■□□□ 1.81
RBFOX1-219ENST00000569895 CXCL17Q6UXB2 119 aa26.34■■□□□ 1.81
RBFOX1-219ENST00000569895 SLC30A10Q6XR72 485 aa26.34■■□□□ 1.81
RBFOX1-219ENST00000569895 WDR11Q9BZH6 1224 aa26.34■■□□□ 1.81
RBFOX1-219ENST00000569895 TBX21Q9UL17 535 aa26.34■■□□□ 1.81
RBFOX1-219ENST00000569895 STXBP5LQ9Y2K9 1186 aa26.34■■□□□ 1.81
RBFOX1-219ENST00000569895 DDX49Q9Y6V7 483 aaKnown RBP26.34■■□□□ 1.81
RBFOX1-219ENST00000569895 U3KPZ7 1027 aaPredicted RBP26.34■■□□□ 1.81
RBFOX1-219ENST00000569895 MCM3APO60318 1980 aa26.34■■□□□ 1.81
RBFOX1-219ENST00000569895 IRX6P78412 446 aaPredicted RBP26.33■■□□□ 1.81
RBFOX1-219ENST00000569895 CDC37Q16543 378 aaPredicted RBP26.33■■□□□ 1.81
RBFOX1-219ENST00000569895 DHX16O60231 1041 aaKnown RBP26.32■■□□□ 1.8
RBFOX1-219ENST00000569895 SMAD3P84022 425 aaKnown RBP26.32■■□□□ 1.8
RBFOX1-219ENST00000569895 ITGA7Q13683 1181 aa26.32■■□□□ 1.8
RBFOX1-219ENST00000569895 ZNF697Q5TEC3 545 aa26.32■■□□□ 1.8
RBFOX1-219ENST00000569895 MFSD5Q6N075 450 aa26.32■■□□□ 1.8
RBFOX1-219ENST00000569895 FAM126BQ8IXS8 530 aa26.32■■□□□ 1.8
RBFOX1-219ENST00000569895 ADGRF4Q8IZF3 695 aa26.32■■□□□ 1.8
RBFOX1-219ENST00000569895 RNPC3Q96LT9 517 aaKnown RBP26.32■■□□□ 1.8
RBFOX1-219ENST00000569895 ABCB11O95342 1321 aa26.32■■□□□ 1.8
RBFOX1-219ENST00000569895 CHMLP26374 656 aa26.31■■□□□ 1.8
RBFOX1-219ENST00000569895 BRDTQ58F21 947 aaPredicted RBP26.31■■□□□ 1.8
RBFOX1-219ENST00000569895 MCF2L2Q86YR7 1114 aa26.31■■□□□ 1.8
RBFOX1-219ENST00000569895 TMEM199Q8N511 208 aa26.31■■□□□ 1.8
RBFOX1-219ENST00000569895 CPVLQ9H3G5 476 aa26.31■■□□□ 1.8
RBFOX1-219ENST00000569895 RBM47A0AV96 593 aaKnown RBP26.3■■□□□ 1.8
RBFOX1-219ENST00000569895 NKRFO15226 690 aaKnown RBP eCLIP26.3■■□□□ 1.8
RBFOX1-219ENST00000569895 CPT1AP50416 773 aa26.3■■□□□ 1.8
RBFOX1-219ENST00000569895 PPIGQ13427 754 aaKnown RBP eCLIP26.3■■□□□ 1.8
RBFOX1-219ENST00000569895 SLC43A3Q8NBI5 491 aa26.3■■□□□ 1.8
RBFOX1-219ENST00000569895 SLC17A8Q8NDX2 589 aa26.3■■□□□ 1.8
RBFOX1-219ENST00000569895 IL25Q9H293 177 aa26.3■■□□□ 1.8
RBFOX1-219ENST00000569895 MRPL11Q9Y3B7 192 aaKnown RBP26.3■■□□□ 1.8
RBFOX1-219ENST00000569895 SCFD2Q8WU76 684 aa26.29■■□□□ 1.8
RBFOX1-219ENST00000569895 VAT1LQ9HCJ6 419 aa26.29■■□□□ 1.8
RBFOX1-219ENST00000569895 GPHNQ9NQX3 736 aaPredicted RBP26.29■■□□□ 1.8
RBFOX1-219ENST00000569895 POLR3EQ9NVU0 708 aa26.29■■□□□ 1.8
RBFOX1-219ENST00000569895 LAMA4Q16363 1823 aa26.28■■□□□ 1.8
RBFOX1-219ENST00000569895 ERICH2A1L162 156 aa26.28■■□□□ 1.8
RBFOX1-219ENST00000569895 CD4P01730 458 aa26.28■■□□□ 1.8
RBFOX1-219ENST00000569895 EDNRBP24530 442 aa26.28■■□□□ 1.8
RBFOX1-219ENST00000569895 EPHB4P54760 987 aa26.28■■□□□ 1.8
RBFOX1-219ENST00000569895 PPP2R5BQ15173 497 aa26.28■■□□□ 1.8
RBFOX1-219ENST00000569895 FBXO11Q86XK2 927 aa26.28■■□□□ 1.8
RBFOX1-219ENST00000569895 QRICH1Q2TAL8 776 aa26.27■■□□□ 1.8
RBFOX1-219ENST00000569895 TMEM63BQ5T3F8 832 aa26.27■■□□□ 1.8
RBFOX1-219ENST00000569895 RALYLQ86SE5 291 aaKnown RBP26.27■■□□□ 1.8
RBFOX1-219ENST00000569895 OR6J1Q8NGC5 347 aa26.27■■□□□ 1.8
RBFOX1-219ENST00000569895 NSUN6Q8TEA1 469 aaKnown RBP26.27■■□□□ 1.8
RBFOX1-219ENST00000569895 JMJD4Q9H9V9 463 aa26.27■■□□□ 1.8
RBFOX1-219ENST00000569895 PTGS1P23219 599 aa26.26■■□□□ 1.79
RBFOX1-219ENST00000569895 SART3Q15020 963 aaKnown RBP26.26■■□□□ 1.79
RBFOX1-219ENST00000569895 SEC23AQ15436 765 aa26.26■■□□□ 1.79
RBFOX1-219ENST00000569895 HSFX4A0A1B0GTS1 333 aaPredicted RBP26.25■■□□□ 1.79
RBFOX1-219ENST00000569895 HSFX3A0A1B0GWH4 333 aaPredicted RBP26.25■■□□□ 1.79
RBFOX1-219ENST00000569895 KLRF2D3W0D1 207 aa26.25■■□□□ 1.79
RBFOX1-219ENST00000569895 KPNA6O60684 536 aa26.25■■□□□ 1.79
RBFOX1-219ENST00000569895 CYP21A2P08686 494 aa26.25■■□□□ 1.79
RBFOX1-219ENST00000569895 PTH1RQ03431 593 aa26.25■■□□□ 1.79
RBFOX1-219ENST00000569895 TTLL4Q14679 1199 aa26.25■■□□□ 1.79
RBFOX1-219ENST00000569895 CYB5R4Q7L1T6 521 aa26.25■■□□□ 1.79
RBFOX1-219ENST00000569895 FAM161BQ96MY7 647 aa26.25■■□□□ 1.79
RBFOX1-219ENST00000569895 IWS1Q96ST2 819 aa26.25■■□□□ 1.79
RBFOX1-219ENST00000569895 AMNQ9BXJ7 453 aa26.25■■□□□ 1.79
RBFOX1-219ENST00000569895 PPP1R12CQ9BZL4 782 aa26.25■■□□□ 1.79
RBFOX1-219ENST00000569895 IFIT3O14879 490 aaKnown RBP26.24■■□□□ 1.79
RBFOX1-219ENST00000569895 SGSM2O43147 1006 aa26.24■■□□□ 1.79
RBFOX1-219ENST00000569895 TXNP10599 105 aaKnown RBP26.24■■□□□ 1.79
RBFOX1-219ENST00000569895 TRAF1Q13077 416 aa26.24■■□□□ 1.79
RBFOX1-219ENST00000569895 NCOA7Q8NI08 942 aa26.24■■□□□ 1.79
RBFOX1-219ENST00000569895 SYTL5Q8TDW5 730 aaPredicted RBP26.24■■□□□ 1.79
RBFOX1-219ENST00000569895 MTG1Q9BT17 334 aaPredicted RBP26.24■■□□□ 1.79
RBFOX1-219ENST00000569895 HIPK3Q9H422 1215 aa26.24■■□□□ 1.79
RBFOX1-219ENST00000569895 GRIN2DO15399 1336 aa26.23■■□□□ 1.79
RBFOX1-219ENST00000569895 MYL3P08590 195 aa26.23■■□□□ 1.79
RBFOX1-219ENST00000569895 SUPT20HL2P0C7V6 817 aa26.23■■□□□ 1.79
RBFOX1-219ENST00000569895 CSF2RAP15509 400 aa26.23■■□□□ 1.79
RBFOX1-219ENST00000569895 PSMC6P62333 389 aa26.23■■□□□ 1.79
RBFOX1-219ENST00000569895 STXBP2Q15833 593 aa26.23■■□□□ 1.79
RBFOX1-219ENST00000569895 STAG2Q8N3U4 1231 aa26.23■■□□□ 1.79
RBFOX1-219ENST00000569895 TBC1D5Q92609 795 aa26.23■■□□□ 1.79
RBFOX1-219ENST00000569895 TAAR1Q96RJ0 339 aa26.23■■□□□ 1.79
RBFOX1-219ENST00000569895 RMDN3Q96TC7 470 aa26.23■■□□□ 1.79
RBFOX1-219ENST00000569895 SEMA6BQ9H3T3 888 aa26.23■■□□□ 1.79
RBFOX1-219ENST00000569895 LRRC37A2A6NM11 1700 aa26.22■■□□□ 1.79
RBFOX1-219ENST00000569895 PURAQ00577 322 aaKnown RBP26.22■■□□□ 1.79
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms