RNA–Protein interactions for RNA: ENST00000569702.1

SHCBP1-207, Transcript of SHC binding and spindle associated 1, humanhuman

TSL 3

Gene SHCBP1, Length 465 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHCBP1-207ENST00000569702 CPA1P15085 419 aa12.85□□□□□ -0.35
SHCBP1-207ENST00000569702 RXRAP19793 462 aa12.85□□□□□ -0.35
SHCBP1-207ENST00000569702 EDNRBP24530 442 aa12.85□□□□□ -0.35
SHCBP1-207ENST00000569702 CALML3P27482 149 aa12.85□□□□□ -0.35
SHCBP1-207ENST00000569702 ALDH5A1P51649 535 aaPredicted RBP12.85□□□□□ -0.35
SHCBP1-207ENST00000569702 TRAF1Q13077 416 aa12.85□□□□□ -0.35
SHCBP1-207ENST00000569702 CCDC144BQ3MJ40 725 aa12.85□□□□□ -0.35
SHCBP1-207ENST00000569702 HOMER1Q86YM7 354 aa12.85□□□□□ -0.35
SHCBP1-207ENST00000569702 SRBD1Q8N5C6 995 aaKnown RBP12.85□□□□□ -0.35
SHCBP1-207ENST00000569702 DNERQ8NFT8 737 aa12.85□□□□□ -0.35
SHCBP1-207ENST00000569702 SYTL5Q8TDW5 730 aaPredicted RBP12.85□□□□□ -0.35
SHCBP1-207ENST00000569702 AGXT2Q9BYV1 514 aa12.85□□□□□ -0.35
SHCBP1-207ENST00000569702 DDX49Q9Y6V7 483 aaKnown RBP12.85□□□□□ -0.35
SHCBP1-207ENST00000569702 ADCY6O43306 1168 aa12.84□□□□□ -0.35
SHCBP1-207ENST00000569702 ADAMTS4O75173 837 aa12.84□□□□□ -0.35
SHCBP1-207ENST00000569702 DUSP11O75319 330 aaKnown RBP12.84□□□□□ -0.35
SHCBP1-207ENST00000569702 PLEKHA8P1O95397 391 aa12.84□□□□□ -0.35
SHCBP1-207ENST00000569702 RPS6KB1P23443 525 aa12.84□□□□□ -0.35
SHCBP1-207ENST00000569702 PSMA5P28066 241 aa12.84□□□□□ -0.35
SHCBP1-207ENST00000569702 RCAN1P53805 252 aa12.84□□□□□ -0.35
SHCBP1-207ENST00000569702 LRRC41Q15345 812 aa12.84□□□□□ -0.35
SHCBP1-207ENST00000569702 PRPF38BQ5VTL8 546 aaKnown RBP12.84□□□□□ -0.35
SHCBP1-207ENST00000569702 TAPT1Q6NXT6 567 aa12.84□□□□□ -0.35
SHCBP1-207ENST00000569702 BLOC1S2Q6QNY1 142 aa12.84□□□□□ -0.35
SHCBP1-207ENST00000569702 SYNE3Q6ZMZ3 975 aa12.84□□□□□ -0.35
SHCBP1-207ENST00000569702 TMTC3Q6ZXV5 915 aa12.84□□□□□ -0.35
SHCBP1-207ENST00000569702 MICU3Q86XE3 530 aa12.84□□□□□ -0.35
SHCBP1-207ENST00000569702 RAB11FIP4Q86YS3 637 aa12.84□□□□□ -0.35
SHCBP1-207ENST00000569702 SAMD3Q8N6K7 520 aa12.84□□□□□ -0.35
SHCBP1-207ENST00000569702 ZSWIM6Q9HCJ5 1215 aa12.84□□□□□ -0.35
SHCBP1-207ENST00000569702 XPNPEP3Q9NQH7 507 aa12.84□□□□□ -0.35
SHCBP1-207ENST00000569702 MAP3K20Q9NYL2 800 aaKnown RBP12.84□□□□□ -0.35
SHCBP1-207ENST00000569702 COL20A1Q9P218 1284 aa12.84□□□□□ -0.35
SHCBP1-207ENST00000569702 CEP290O15078 2479 aa12.83□□□□□ -0.36
SHCBP1-207ENST00000569702 ZBTB43O43298 467 aa12.83□□□□□ -0.36
SHCBP1-207ENST00000569702 HSD17B4P51659 736 aa12.83□□□□□ -0.36
SHCBP1-207ENST00000569702 NKX3-2P78367 333 aa12.83□□□□□ -0.36
SHCBP1-207ENST00000569702 GJC2Q5T442 439 aaPredicted RBP12.83□□□□□ -0.36
SHCBP1-207ENST00000569702 Q6ZUG5 572 aa12.83□□□□□ -0.36
SHCBP1-207ENST00000569702 CMTR1Q8N1G2 835 aaKnown RBP12.83□□□□□ -0.36
SHCBP1-207ENST00000569702 DPF3Q92784 378 aa12.83□□□□□ -0.36
SHCBP1-207ENST00000569702 LENG1Q96BZ8 264 aaPredicted RBP12.83□□□□□ -0.36
SHCBP1-207ENST00000569702 RRP36Q96EU6 259 aaKnown RBP12.83□□□□□ -0.36
SHCBP1-207ENST00000569702 TM6SF1Q9BZW5 370 aa12.83□□□□□ -0.36
SHCBP1-207ENST00000569702 VTA1Q9NP79 307 aa12.83□□□□□ -0.36
SHCBP1-207ENST00000569702 FAM217BQ9NTX9 383 aaPredicted RBP12.83□□□□□ -0.36
SHCBP1-207ENST00000569702 KLF18A0A0U1RQI7 1052 aa12.82□□□□□ -0.36
SHCBP1-207ENST00000569702 RBM47A0AV96 593 aaKnown RBP12.82□□□□□ -0.36
SHCBP1-207ENST00000569702 PGK1P00558 417 aa12.82□□□□□ -0.36
SHCBP1-207ENST00000569702 CFBP00751 764 aa12.82□□□□□ -0.36
SHCBP1-207ENST00000569702 CASTP20810 708 aaKnown RBP12.82□□□□□ -0.36
SHCBP1-207ENST00000569702 ADCYAP1R1P41586 468 aa12.82□□□□□ -0.36
SHCBP1-207ENST00000569702 FUT2Q10981 343 aa12.82□□□□□ -0.36
SHCBP1-207ENST00000569702 IQSEC1Q6DN90 963 aa12.82□□□□□ -0.36
SHCBP1-207ENST00000569702 CCSAPQ6IQ19 270 aaPredicted RBP12.82□□□□□ -0.36
SHCBP1-207ENST00000569702 RUFY3Q7L099 469 aa12.82□□□□□ -0.36
SHCBP1-207ENST00000569702 EEPD1Q7L9B9 569 aa12.82□□□□□ -0.36
SHCBP1-207ENST00000569702 RNF180Q86T96 592 aa12.82□□□□□ -0.36
SHCBP1-207ENST00000569702 FBXO16Q8IX29 292 aaPredicted RBP12.82□□□□□ -0.36
SHCBP1-207ENST00000569702 KLHDC9Q8NEP7 349 aa12.82□□□□□ -0.36
SHCBP1-207ENST00000569702 TAAR1Q96RJ0 339 aa12.82□□□□□ -0.36
SHCBP1-207ENST00000569702 SENP6Q9GZR1 1112 aaPredicted RBP12.82□□□□□ -0.36
SHCBP1-207ENST00000569702 UPF3AQ9H1J1 476 aaKnown RBP12.82□□□□□ -0.36
SHCBP1-207ENST00000569702 PDGFCQ9NRA1 345 aa12.82□□□□□ -0.36
SHCBP1-207ENST00000569702 RBM28Q9NW13 759 aaKnown RBP12.82□□□□□ -0.36
SHCBP1-207ENST00000569702 GNEQ9Y223 722 aaKnown RBP12.82□□□□□ -0.36
SHCBP1-207ENST00000569702 SYNRGQ9UMZ2 1314 aa12.82□□□□□ -0.36
SHCBP1-207ENST00000569702 LRRC37A2A6NM11 1700 aa12.82□□□□□ -0.36
SHCBP1-207ENST00000569702 C11orf97A0A1B0GVM6 126 aaPredicted RBP12.81□□□□□ -0.36
SHCBP1-207ENST00000569702 B4DLN1 442 aa12.81□□□□□ -0.36
SHCBP1-207ENST00000569702 KBTBD13C9JR72 458 aa12.81□□□□□ -0.36
SHCBP1-207ENST00000569702 CST5P28325 142 aaPredicted RBP12.81□□□□□ -0.36
SHCBP1-207ENST00000569702 MRPL12P52815 198 aaKnown RBP12.81□□□□□ -0.36
SHCBP1-207ENST00000569702 EVCP57679 992 aa12.81□□□□□ -0.36
SHCBP1-207ENST00000569702 GJA9P57773 515 aa12.81□□□□□ -0.36
SHCBP1-207ENST00000569702 FGD1P98174 961 aa12.81□□□□□ -0.36
SHCBP1-207ENST00000569702 TNFAIP2Q03169 654 aa12.81□□□□□ -0.36
SHCBP1-207ENST00000569702 PDE4DQ08499 809 aa12.81□□□□□ -0.36
SHCBP1-207ENST00000569702 APOBRQ0VD83 1088 aa12.81□□□□□ -0.36
SHCBP1-207ENST00000569702 PPP2R5BQ15173 497 aa12.81□□□□□ -0.36
SHCBP1-207ENST00000569702 RTN1Q16799 776 aa12.81□□□□□ -0.36
SHCBP1-207ENST00000569702 NSUN6Q8TEA1 469 aaKnown RBP12.81□□□□□ -0.36
SHCBP1-207ENST00000569702 PIBF1Q8WXW3 757 aa12.81□□□□□ -0.36
SHCBP1-207ENST00000569702 BRF1Q92994 677 aa12.81□□□□□ -0.36
SHCBP1-207ENST00000569702 IWS1Q96ST2 819 aa12.81□□□□□ -0.36
SHCBP1-207ENST00000569702 RMDN3Q96TC7 470 aa12.81□□□□□ -0.36
SHCBP1-207ENST00000569702 MPHOSPH6Q99547 160 aaKnown RBP12.81□□□□□ -0.36
SHCBP1-207ENST00000569702 TSEN34Q9BSV6 310 aaKnown RBP12.81□□□□□ -0.36
SHCBP1-207ENST00000569702 SEC63Q9UGP8 760 aaKnown RBP12.81□□□□□ -0.36
SHCBP1-207ENST00000569702 PHF24Q9UPV7 400 aa12.81□□□□□ -0.36
SHCBP1-207ENST00000569702 ALPK3Q96L96 1907 aa12.81□□□□□ -0.36
SHCBP1-207ENST00000569702 CTAGE5O15320 804 aa12.8□□□□□ -0.36
SHCBP1-207ENST00000569702 EVI5O60447 810 aa12.8□□□□□ -0.36
SHCBP1-207ENST00000569702 EIF5BO60841 1220 aaKnown RBP12.8□□□□□ -0.36
SHCBP1-207ENST00000569702 SMPD1P17405 629 aa12.8□□□□□ -0.36
SHCBP1-207ENST00000569702 CDC27P30260 824 aa12.8□□□□□ -0.36
SHCBP1-207ENST00000569702 HOXA13P31271 388 aaPredicted RBP12.8□□□□□ -0.36
SHCBP1-207ENST00000569702 IRX5P78411 483 aaPredicted RBP12.8□□□□□ -0.36
SHCBP1-207ENST00000569702 LRRC26Q2I0M4 334 aa12.8□□□□□ -0.36
SHCBP1-207ENST00000569702 TMEM63BQ5T3F8 832 aa12.8□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms