RNA–Protein interactions for RNA: ENST00000569575.5

RAB40C-212, Transcript of RAB40C, member RAS oncogene family, humanhuman

TSL 2

Gene RAB40C, Length 692 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-212ENST00000569575 KRT40Q6A162 431 aa26.91■■□□□ 1.9
RAB40C-212ENST00000569575 TYW1BQ6NUM6 668 aa26.91■■□□□ 1.9
RAB40C-212ENST00000569575 CYP39A1Q9NYL5 469 aa26.91■■□□□ 1.9
RAB40C-212ENST00000569575 RBBP6Q7Z6E9 1792 aaKnown RBP26.9■■□□□ 1.9
RAB40C-212ENST00000569575 B4DLN1 442 aa26.9■■□□□ 1.9
RAB40C-212ENST00000569575 H3BQV1 296 aa26.9■■□□□ 1.9
RAB40C-212ENST00000569575 NFIBO00712 420 aa26.9■■□□□ 1.9
RAB40C-212ENST00000569575 TNPO2O14787 897 aaKnown RBP26.9■■□□□ 1.9
RAB40C-212ENST00000569575 OPLAHO14841 1288 aa26.9■■□□□ 1.9
RAB40C-212ENST00000569575 GRB14Q14449 540 aa26.9■■□□□ 1.9
RAB40C-212ENST00000569575 IFFO2Q5TF58 517 aa26.9■■□□□ 1.9
RAB40C-212ENST00000569575 WDR78Q5VTH9 848 aa26.9■■□□□ 1.9
RAB40C-212ENST00000569575 BLIDQ8IZY5 108 aa26.9■■□□□ 1.9
RAB40C-212ENST00000569575 REXO1Q8N1G1 1221 aaKnown RBP26.9■■□□□ 1.9
RAB40C-212ENST00000569575 DNERQ8NFT8 737 aa26.9■■□□□ 1.9
RAB40C-212ENST00000569575 AIFM3Q96NN9 605 aa26.9■■□□□ 1.9
RAB40C-212ENST00000569575 IPO9Q96P70 1041 aaKnown RBP26.9■■□□□ 1.9
RAB40C-212ENST00000569575 MPHOSPH6Q99547 160 aaKnown RBP26.9■■□□□ 1.9
RAB40C-212ENST00000569575 EHMT1Q9H9B1 1298 aa26.9■■□□□ 1.9
RAB40C-212ENST00000569575 A1CFQ9NQ94 594 aaKnown RBP26.9■■□□□ 1.9
RAB40C-212ENST00000569575 ADD3Q9UEY8 706 aaKnown RBP26.9■■□□□ 1.9
RAB40C-212ENST00000569575 ZNF236Q9UL36 1845 aa26.9■■□□□ 1.9
RAB40C-212ENST00000569575 MEIS2O14770 477 aa26.89■■□□□ 1.9
RAB40C-212ENST00000569575 CFBP00751 764 aa26.89■■□□□ 1.9
RAB40C-212ENST00000569575 PSMC4P43686 418 aa26.89■■□□□ 1.9
RAB40C-212ENST00000569575 RPS6P62753 249 aaKnown RBP26.89■■□□□ 1.9
RAB40C-212ENST00000569575 NSMFQ6X4W1 530 aa26.89■■□□□ 1.9
RAB40C-212ENST00000569575 NUDT12Q9BQG2 462 aa26.89■■□□□ 1.9
RAB40C-212ENST00000569575 FOXP1Q9H334 677 aaPredicted RBP26.89■■□□□ 1.9
RAB40C-212ENST00000569575 MGAMO43451 1857 aa26.89■■□□□ 1.89
RAB40C-212ENST00000569575 DNAJC25-GNG10A0A024R161 153 aa26.88■■□□□ 1.89
RAB40C-212ENST00000569575 PEX10O60683 326 aa26.88■■□□□ 1.89
RAB40C-212ENST00000569575 KRT2P35908 639 aa26.88■■□□□ 1.89
RAB40C-212ENST00000569575 SPDYE3A6NKU9 549 aa26.87■■□□□ 1.89
RAB40C-212ENST00000569575 HOXC6P09630 235 aa26.87■■□□□ 1.89
RAB40C-212ENST00000569575 CLK2P49760 499 aaKnown RBP26.87■■□□□ 1.89
RAB40C-212ENST00000569575 BAATQ14032 418 aaPredicted RBP26.87■■□□□ 1.89
RAB40C-212ENST00000569575 MORN1Q5T089 497 aa26.87■■□□□ 1.89
RAB40C-212ENST00000569575 ZNF467Q7Z7K2 595 aaPredicted RBP26.87■■□□□ 1.89
RAB40C-212ENST00000569575 MSL3Q8N5Y2 521 aaKnown RBP26.87■■□□□ 1.89
RAB40C-212ENST00000569575 ZNF296Q8WUU4 475 aaPredicted RBP26.87■■□□□ 1.89
RAB40C-212ENST00000569575 ZNFX1Q9P2E3 1918 aaKnown RBP26.86■■□□□ 1.89
RAB40C-212ENST00000569575 POTEB2H3BUK9 544 aa26.86■■□□□ 1.89
RAB40C-212ENST00000569575 XRCC5P13010 732 aaKnown RBP26.86■■□□□ 1.89
RAB40C-212ENST00000569575 SYT1P21579 422 aa26.86■■□□□ 1.89
RAB40C-212ENST00000569575 CTCFP49711 727 aaPredicted RBP26.86■■□□□ 1.89
RAB40C-212ENST00000569575 KRT25Q7Z3Z0 450 aa26.86■■□□□ 1.89
RAB40C-212ENST00000569575 TRMT44Q8IYL2 757 aaKnown RBP26.86■■□□□ 1.89
RAB40C-212ENST00000569575 FAM133AQ8N9E0 248 aa26.86■■□□□ 1.89
RAB40C-212ENST00000569575 SYTL5Q8TDW5 730 aaPredicted RBP26.86■■□□□ 1.89
RAB40C-212ENST00000569575 STX6O43752 255 aa26.85■■□□□ 1.89
RAB40C-212ENST00000569575 ADORA2AP29274 412 aa26.85■■□□□ 1.89
RAB40C-212ENST00000569575 RGS2P41220 211 aa26.85■■□□□ 1.89
RAB40C-212ENST00000569575 MAP2K5Q13163 448 aa26.85■■□□□ 1.89
RAB40C-212ENST00000569575 XRRA1Q6P2D8 792 aa26.85■■□□□ 1.89
RAB40C-212ENST00000569575 NSUN6Q8TEA1 469 aaKnown RBP26.85■■□□□ 1.89
RAB40C-212ENST00000569575 IWS1Q96ST2 819 aa26.85■■□□□ 1.89
RAB40C-212ENST00000569575 FOXD4L1Q9NU39 408 aa26.85■■□□□ 1.89
RAB40C-212ENST00000569575 KCNJ14Q9UNX9 436 aa26.85■■□□□ 1.89
RAB40C-212ENST00000569575 PLXNB2O15031 1838 aa26.85■■□□□ 1.89
RAB40C-212ENST00000569575 M0R2N6 131 aa26.84■■□□□ 1.89
RAB40C-212ENST00000569575 U2AF2P26368 475 aaKnown RBP eCLIP26.84■■□□□ 1.89
RAB40C-212ENST00000569575 NPY5RQ15761 445 aa26.84■■□□□ 1.89
RAB40C-212ENST00000569575 DPP9Q86TI2 863 aa26.84■■□□□ 1.89
RAB40C-212ENST00000569575 DIS3L2Q8IYB7 885 aaKnown RBP26.84■■□□□ 1.89
RAB40C-212ENST00000569575 USP6NLQ92738 828 aa26.84■■□□□ 1.89
RAB40C-212ENST00000569575 SHISA4Q96DD7 197 aa26.84■■□□□ 1.89
RAB40C-212ENST00000569575 TRIM47Q96LD4 638 aa26.84■■□□□ 1.89
RAB40C-212ENST00000569575 GJD2Q9UKL4 321 aa26.84■■□□□ 1.89
RAB40C-212ENST00000569575 GNL2Q13823 731 aaKnown RBP26.83■■□□□ 1.89
RAB40C-212ENST00000569575 USP17L6PQ6QN14 398 aa26.83■■□□□ 1.89
RAB40C-212ENST00000569575 CIZ1Q9ULV3 898 aaPredicted RBP26.83■■□□□ 1.89
RAB40C-212ENST00000569575 ASB14A6NK59 587 aa26.82■■□□□ 1.88
RAB40C-212ENST00000569575 IRF5Q13568 498 aa26.82■■□□□ 1.88
RAB40C-212ENST00000569575 ZNF792Q3KQV3 632 aa26.82■■□□□ 1.88
RAB40C-212ENST00000569575 TBC1D5Q92609 795 aa26.82■■□□□ 1.88
RAB40C-212ENST00000569575 ZSCAN16Q9H4T2 348 aaPredicted RBP26.82■■□□□ 1.88
RAB40C-212ENST00000569575 PCDHA6Q9UN73 950 aa26.82■■□□□ 1.88
RAB40C-212ENST00000569575 PCDHA8Q9Y5H6 950 aa26.82■■□□□ 1.88
RAB40C-212ENST00000569575 CCDC194A0A1B0GVG4 234 aa26.81■■□□□ 1.88
RAB40C-212ENST00000569575 STAM2O75886 525 aa26.81■■□□□ 1.88
RAB40C-212ENST00000569575 NUCB2P80303 420 aa26.81■■□□□ 1.88
RAB40C-212ENST00000569575 SLC30A10Q6XR72 485 aa26.81■■□□□ 1.88
RAB40C-212ENST00000569575 BRAPQ7Z569 592 aa26.81■■□□□ 1.88
RAB40C-212ENST00000569575 CD99L2Q8TCZ2 262 aa26.81■■□□□ 1.88
RAB40C-212ENST00000569575 RMDN3Q96TC7 470 aa26.81■■□□□ 1.88
RAB40C-212ENST00000569575 NAP1L4Q99733 375 aaKnown RBP26.81■■□□□ 1.88
RAB40C-212ENST00000569575 GJB4Q9NTQ9 266 aa26.81■■□□□ 1.88
RAB40C-212ENST00000569575 BIN2Q9UBW5 565 aaPredicted RBP26.81■■□□□ 1.88
RAB40C-212ENST00000569575 SRRDQ9UH36 339 aa26.81■■□□□ 1.88
RAB40C-212ENST00000569575 FRMPD4Q14CM0 1322 aa26.81■■□□□ 1.88
RAB40C-212ENST00000569575 DOCK3Q8IZD9 2030 aa26.8■■□□□ 1.88
RAB40C-212ENST00000569575 HSPA1AP0DMV8 641 aaKnown RBP26.8■■□□□ 1.88
RAB40C-212ENST00000569575 HSPA1BP0DMV9 641 aaKnown RBP26.8■■□□□ 1.88
RAB40C-212ENST00000569575 TAL1P17542 331 aaPredicted RBP26.8■■□□□ 1.88
RAB40C-212ENST00000569575 HOXA13P31271 388 aaPredicted RBP26.8■■□□□ 1.88
RAB40C-212ENST00000569575 USP11P51784 963 aa26.8■■□□□ 1.88
RAB40C-212ENST00000569575 MAMDC4Q6UXC1 1216 aa26.8■■□□□ 1.88
RAB40C-212ENST00000569575 SPRYD3Q8NCJ5 442 aa26.8■■□□□ 1.88
RAB40C-212ENST00000569575 APBA2Q99767 749 aa26.8■■□□□ 1.88
Retrieved 100 of 20,778 RNA–protein pairs in 51.8 ms