RNA–Protein interactions for RNA: ENST00000569245.5

COMMD4-225, Transcript of COMM domain containing 4, humanhuman

TSL 2

Gene COMMD4, Length 867 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-225ENST00000569245 PDE4DQ08499 809 aa16.79■□□□□ 0.28
COMMD4-225ENST00000569245 TROAPQ12815 778 aa16.79■□□□□ 0.28
COMMD4-225ENST00000569245 TMTC2Q8N394 836 aa16.79■□□□□ 0.28
COMMD4-225ENST00000569245 CTCFLQ8NI51 663 aaPredicted RBP16.79■□□□□ 0.28
COMMD4-225ENST00000569245 TMEM87BQ96K49 555 aa16.79■□□□□ 0.28
COMMD4-225ENST00000569245 KATNBL1Q9H079 304 aa16.79■□□□□ 0.28
COMMD4-225ENST00000569245 LY9Q9HBG7 655 aa16.79■□□□□ 0.28
COMMD4-225ENST00000569245 PHF24Q9UPV7 400 aa16.79■□□□□ 0.28
COMMD4-225ENST00000569245 C11orf97A0A1B0GVM6 126 aaPredicted RBP16.78■□□□□ 0.28
COMMD4-225ENST00000569245 ZBTB5O15062 677 aa16.78■□□□□ 0.28
COMMD4-225ENST00000569245 ADCY6O43306 1168 aa16.78■□□□□ 0.28
COMMD4-225ENST00000569245 KIF5BP33176 963 aa16.78■□□□□ 0.28
COMMD4-225ENST00000569245 ACLYP53396 1101 aa16.78■□□□□ 0.28
COMMD4-225ENST00000569245 KCNA10Q16322 511 aa16.78■□□□□ 0.28
COMMD4-225ENST00000569245 GNASQ5JWF2 1037 aa16.78■□□□□ 0.28
COMMD4-225ENST00000569245 IQSEC1Q6DN90 963 aa16.78■□□□□ 0.28
COMMD4-225ENST00000569245 ZNF654Q8IZM8 581 aa16.78■□□□□ 0.28
COMMD4-225ENST00000569245 IL27Q8NEV9 243 aa16.78■□□□□ 0.28
COMMD4-225ENST00000569245 PIBF1Q8WXW3 757 aa16.78■□□□□ 0.28
COMMD4-225ENST00000569245 VTI1AQ96AJ9 217 aa16.78■□□□□ 0.28
COMMD4-225ENST00000569245 TSEN34Q9BSV6 310 aaKnown RBP16.78■□□□□ 0.28
COMMD4-225ENST00000569245 MTA3Q9BTC8 594 aa16.78■□□□□ 0.28
COMMD4-225ENST00000569245 MYL10Q9BUA6 226 aa16.78■□□□□ 0.28
COMMD4-225ENST00000569245 LRRC2Q9BYS8 371 aa16.78■□□□□ 0.28
COMMD4-225ENST00000569245 AP5M1Q9H0R1 490 aa16.78■□□□□ 0.28
COMMD4-225ENST00000569245 VTA1Q9NP79 307 aa16.78■□□□□ 0.28
COMMD4-225ENST00000569245 PDGFCQ9NRA1 345 aa16.78■□□□□ 0.28
COMMD4-225ENST00000569245 RBM27Q9P2N5 1060 aaKnown RBP16.78■□□□□ 0.28
COMMD4-225ENST00000569245 PRKAG2Q9UGJ0 569 aa16.78■□□□□ 0.28
COMMD4-225ENST00000569245 PCDHA1Q9Y5I3 950 aa16.78■□□□□ 0.28
COMMD4-225ENST00000569245 LOC102724159A0A0B4J2E5 919 aa16.77■□□□□ 0.28
COMMD4-225ENST00000569245 A0A1W2PQ45 241 aaPredicted RBP16.77■□□□□ 0.28
COMMD4-225ENST00000569245 A0A1W2PQY0 241 aa16.77■□□□□ 0.28
COMMD4-225ENST00000569245 SH2B2O14492 632 aaPredicted RBP16.77■□□□□ 0.28
COMMD4-225ENST00000569245 DYNC1LI2O43237 492 aaPredicted RBP16.77■□□□□ 0.28
COMMD4-225ENST00000569245 DDAH1O94760 285 aa16.77■□□□□ 0.28
COMMD4-225ENST00000569245 GJA9P57773 515 aa16.77■□□□□ 0.28
COMMD4-225ENST00000569245 TRAF1Q13077 416 aa16.77■□□□□ 0.28
COMMD4-225ENST00000569245 KRT32Q14532 448 aa16.77■□□□□ 0.28
COMMD4-225ENST00000569245 PWP2Q15269 919 aaKnown RBP16.77■□□□□ 0.28
COMMD4-225ENST00000569245 RABEP1Q15276 862 aa16.77■□□□□ 0.28
COMMD4-225ENST00000569245 PCSK9Q8NBP7 692 aaKnown RBP16.77■□□□□ 0.28
COMMD4-225ENST00000569245 KLHDC9Q8NEP7 349 aa16.77■□□□□ 0.28
COMMD4-225ENST00000569245 DNERQ8NFT8 737 aa16.77■□□□□ 0.28
COMMD4-225ENST00000569245 MORC4Q8TE76 937 aa16.77■□□□□ 0.28
COMMD4-225ENST00000569245 TBC1D5Q92609 795 aa16.77■□□□□ 0.28
COMMD4-225ENST00000569245 NEK1Q96PY6 1258 aa16.77■□□□□ 0.28
COMMD4-225ENST00000569245 PIGSQ96S52 555 aa16.77■□□□□ 0.28
COMMD4-225ENST00000569245 TM6SF1Q9BZW5 370 aa16.77■□□□□ 0.28
COMMD4-225ENST00000569245 SLC12A7Q9Y666 1083 aa16.77■□□□□ 0.28
COMMD4-225ENST00000569245 MYADML2A6NDP7 307 aa16.76■□□□□ 0.27
COMMD4-225ENST00000569245 MOXD2PA6NHM9 499 aa16.76■□□□□ 0.27
COMMD4-225ENST00000569245 CFBP00751 764 aa16.76■□□□□ 0.27
COMMD4-225ENST00000569245 SMPD1P17405 629 aa16.76■□□□□ 0.27
COMMD4-225ENST00000569245 TRIM60Q495X7 471 aa16.76■□□□□ 0.27
COMMD4-225ENST00000569245 TAPT1Q6NXT6 567 aa16.76■□□□□ 0.27
COMMD4-225ENST00000569245 SYNE3Q6ZMZ3 975 aa16.76■□□□□ 0.27
COMMD4-225ENST00000569245 TLK2Q86UE8 772 aa16.76■□□□□ 0.27
COMMD4-225ENST00000569245 SYTL5Q8TDW5 730 aaPredicted RBP16.76■□□□□ 0.27
COMMD4-225ENST00000569245 MTMR8Q96EF0 704 aa16.76■□□□□ 0.27
COMMD4-225ENST00000569245 MAF1Q9H063 256 aa16.76■□□□□ 0.27
COMMD4-225ENST00000569245 UPF3AQ9H1J1 476 aaKnown RBP16.76■□□□□ 0.27
COMMD4-225ENST00000569245 RIOX1Q9H6W3 641 aa16.76■□□□□ 0.27
COMMD4-225ENST00000569245 PRDM5Q9NQX1 630 aaPredicted RBP16.76■□□□□ 0.27
COMMD4-225ENST00000569245 STARD7Q9NQZ5 370 aa16.76■□□□□ 0.27
COMMD4-225ENST00000569245 RANBP2P49792 3224 aaKnown RBP16.75■□□□□ 0.27
COMMD4-225ENST00000569245 PNMA6FA0A0J9YX94 578 aa16.75■□□□□ 0.27
COMMD4-225ENST00000569245 PPP1R11O60927 126 aaPredicted RBP16.75■□□□□ 0.27
COMMD4-225ENST00000569245 CALM1P0DP23 149 aa16.75■□□□□ 0.27
COMMD4-225ENST00000569245 CALM2P0DP24 149 aa16.75■□□□□ 0.27
COMMD4-225ENST00000569245 CALM3P0DP25 149 aa16.75■□□□□ 0.27
COMMD4-225ENST00000569245 LIFRP42702 1097 aa16.75■□□□□ 0.27
COMMD4-225ENST00000569245 GNAQP50148 359 aa16.75■□□□□ 0.27
COMMD4-225ENST00000569245 IRX5P78411 483 aaPredicted RBP16.75■□□□□ 0.27
COMMD4-225ENST00000569245 BEX3Q00994 111 aa16.75■□□□□ 0.27
COMMD4-225ENST00000569245 COL9A3Q14050 684 aaPredicted RBP16.75■□□□□ 0.27
COMMD4-225ENST00000569245 NSUN6Q8TEA1 469 aaKnown RBP16.75■□□□□ 0.27
COMMD4-225ENST00000569245 GLT1D1Q96MS3 346 aa16.75■□□□□ 0.27
COMMD4-225ENST00000569245 TAAR1Q96RJ0 339 aa16.75■□□□□ 0.27
COMMD4-225ENST00000569245 RMDN3Q96TC7 470 aa16.75■□□□□ 0.27
COMMD4-225ENST00000569245 MAP3K14Q99558 947 aa16.75■□□□□ 0.27
COMMD4-225ENST00000569245 LBHD1Q9BQE6 289 aaPredicted RBP16.75■□□□□ 0.27
COMMD4-225ENST00000569245 WDR11Q9BZH6 1224 aa16.75■□□□□ 0.27
COMMD4-225ENST00000569245 SMCHD1A6NHR9 2005 aa16.74■□□□□ 0.27
COMMD4-225ENST00000569245 CYTH3O43739 400 aa16.74■□□□□ 0.27
COMMD4-225ENST00000569245 ZEB2O60315 1214 aa16.74■□□□□ 0.27
COMMD4-225ENST00000569245 PQBP1O60828 265 aaKnown RBP16.74■□□□□ 0.27
COMMD4-225ENST00000569245 ASGR1P07306 291 aa16.74■□□□□ 0.27
COMMD4-225ENST00000569245 RXRAP19793 462 aa16.74■□□□□ 0.27
COMMD4-225ENST00000569245 PSMA5P28066 241 aa16.74■□□□□ 0.27
COMMD4-225ENST00000569245 CST5P28325 142 aaPredicted RBP16.74■□□□□ 0.27
COMMD4-225ENST00000569245 MAGEA10P43363 369 aaPredicted RBP16.74■□□□□ 0.27
COMMD4-225ENST00000569245 FGD1P98174 961 aa16.74■□□□□ 0.27
COMMD4-225ENST00000569245 MDM2Q00987 491 aaPredicted RBP16.74■□□□□ 0.27
COMMD4-225ENST00000569245 FSCN1Q16658 493 aaKnown RBP16.74■□□□□ 0.27
COMMD4-225ENST00000569245 SLC35G1Q2M3R5 365 aa16.74■□□□□ 0.27
COMMD4-225ENST00000569245 ARHGEF16Q5VV41 709 aa16.74■□□□□ 0.27
COMMD4-225ENST00000569245 CCSAPQ6IQ19 270 aaPredicted RBP16.74■□□□□ 0.27
COMMD4-225ENST00000569245 DHX32Q7L7V1 743 aaKnown RBP16.74■□□□□ 0.27
COMMD4-225ENST00000569245 RAB11FIP4Q86YS3 637 aa16.74■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms