RNA–Protein interactions for RNA: ENST00000568877.5

COMMD4-224, Transcript of COMM domain containing 4, humanhuman

TSL 2

Gene COMMD4, Length 770 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-224ENST00000568877 GCOM1H8Y6P7 765 aaPredicted RBP19.27■□□□□ 0.68
COMMD4-224ENST00000568877 HOXC6P09630 235 aa19.27■□□□□ 0.68
COMMD4-224ENST00000568877 POLR2MP0CAP2 368 aa19.27■□□□□ 0.68
COMMD4-224ENST00000568877 CALML3P27482 149 aa19.27■□□□□ 0.68
COMMD4-224ENST00000568877 HSD17B4P51659 736 aa19.27■□□□□ 0.68
COMMD4-224ENST00000568877 HMGN5P82970 282 aaKnown RBP19.27■□□□□ 0.68
COMMD4-224ENST00000568877 ZNF792Q3KQV3 632 aa19.27■□□□□ 0.68
COMMD4-224ENST00000568877 SLC30A10Q6XR72 485 aa19.27■□□□□ 0.68
COMMD4-224ENST00000568877 FAM133AQ8N9E0 248 aa19.27■□□□□ 0.68
COMMD4-224ENST00000568877 RAET1EQ8TD07 263 aa19.27■□□□□ 0.68
COMMD4-224ENST00000568877 CCDC12Q8WUD4 166 aaPredicted RBP19.27■□□□□ 0.68
COMMD4-224ENST00000568877 APBA2Q99767 749 aa19.27■□□□□ 0.68
COMMD4-224ENST00000568877 SH3GLB2Q9NR46 395 aa19.27■□□□□ 0.68
COMMD4-224ENST00000568877 VPS54Q9P1Q0 977 aa19.27■□□□□ 0.68
COMMD4-224ENST00000568877 PTPN22Q9Y2R2 807 aa19.27■□□□□ 0.68
COMMD4-224ENST00000568877 PLXNB2O15031 1838 aa19.27■□□□□ 0.68
COMMD4-224ENST00000568877 MYH6P13533 1939 aa19.27■□□□□ 0.67
COMMD4-224ENST00000568877 SMCHD1A6NHR9 2005 aa19.27■□□□□ 0.67
COMMD4-224ENST00000568877 ZNF236Q9UL36 1845 aa19.26■□□□□ 0.67
COMMD4-224ENST00000568877 SMCO2A6NFE2 343 aa19.26■□□□□ 0.67
COMMD4-224ENST00000568877 XRCC5P13010 732 aaKnown RBP19.26■□□□□ 0.67
COMMD4-224ENST00000568877 CNTN2Q02246 1040 aa19.26■□□□□ 0.67
COMMD4-224ENST00000568877 NPLOC4Q8TAT6 608 aa19.26■□□□□ 0.67
COMMD4-224ENST00000568877 ALG1Q9BT22 464 aa19.26■□□□□ 0.67
COMMD4-224ENST00000568877 DIS3Q9Y2L1 958 aaKnown RBP19.26■□□□□ 0.67
COMMD4-224ENST00000568877 ZSCAN21Q9Y5A6 473 aaPredicted RBP19.26■□□□□ 0.67
COMMD4-224ENST00000568877 ESYT2A0FGR8 921 aa19.25■□□□□ 0.67
COMMD4-224ENST00000568877 PIK3CDO00329 1044 aa19.25■□□□□ 0.67
COMMD4-224ENST00000568877 XBP1P17861 261 aa19.25■□□□□ 0.67
COMMD4-224ENST00000568877 HOXA13P31271 388 aaPredicted RBP19.25■□□□□ 0.67
COMMD4-224ENST00000568877 ADCY7P51828 1080 aa19.25■□□□□ 0.67
COMMD4-224ENST00000568877 MRPL12P52815 198 aaKnown RBP19.25■□□□□ 0.67
COMMD4-224ENST00000568877 PKN2Q16513 984 aaKnown RBP19.25■□□□□ 0.67
COMMD4-224ENST00000568877 FAM177A1Q8N128 213 aaPredicted RBP19.25■□□□□ 0.67
COMMD4-224ENST00000568877 CCDC148Q8NFR7 591 aa19.25■□□□□ 0.67
COMMD4-224ENST00000568877 SYTL5Q8TDW5 730 aaPredicted RBP19.25■□□□□ 0.67
COMMD4-224ENST00000568877 CUL5Q93034 780 aa19.25■□□□□ 0.67
COMMD4-224ENST00000568877 SHISA4Q96DD7 197 aa19.25■□□□□ 0.67
COMMD4-224ENST00000568877 PURBQ96QR8 312 aaKnown RBP19.25■□□□□ 0.67
COMMD4-224ENST00000568877 ZMYND12Q9H0C1 365 aa19.25■□□□□ 0.67
COMMD4-224ENST00000568877 GLT8D2Q9H1C3 349 aa19.25■□□□□ 0.67
COMMD4-224ENST00000568877 RIC8AQ9NPQ8 531 aa19.25■□□□□ 0.67
COMMD4-224ENST00000568877 PTCH2Q9Y6C5 1203 aa19.25■□□□□ 0.67
COMMD4-224ENST00000568877 MEIS2O14770 477 aa19.24■□□□□ 0.67
COMMD4-224ENST00000568877 NLRP5P59047 1200 aa19.24■□□□□ 0.67
COMMD4-224ENST00000568877 USP17L6PQ6QN14 398 aa19.24■□□□□ 0.67
COMMD4-224ENST00000568877 TEX2Q8IWB9 1127 aa19.24■□□□□ 0.67
COMMD4-224ENST00000568877 FAM184AQ8NB25 1140 aa19.24■□□□□ 0.67
COMMD4-224ENST00000568877 MAML3Q96JK9 1138 aa19.24■□□□□ 0.67
COMMD4-224ENST00000568877 C6orf50Q9HD87 102 aa19.24■□□□□ 0.67
COMMD4-224ENST00000568877 COL20A1Q9P218 1284 aa19.24■□□□□ 0.67
COMMD4-224ENST00000568877 SOWAHBA6NEL2 793 aa19.23■□□□□ 0.67
COMMD4-224ENST00000568877 ADCY3O60266 1144 aa19.23■□□□□ 0.67
COMMD4-224ENST00000568877 GNA11P29992 359 aa19.23■□□□□ 0.67
COMMD4-224ENST00000568877 CCL14Q16627 93 aa19.23■□□□□ 0.67
COMMD4-224ENST00000568877 FBXO46Q6PJ61 603 aaPredicted RBP19.23■□□□□ 0.67
COMMD4-224ENST00000568877 ZNF467Q7Z7K2 595 aaPredicted RBP19.23■□□□□ 0.67
COMMD4-224ENST00000568877 TRMT44Q8IYL2 757 aaKnown RBP19.23■□□□□ 0.67
COMMD4-224ENST00000568877 PXYLP1Q8TE99 480 aa19.23■□□□□ 0.67
COMMD4-224ENST00000568877 INTS4Q96HW7 963 aaKnown RBP19.23■□□□□ 0.67
COMMD4-224ENST00000568877 FGD4Q96M96 766 aa19.23■□□□□ 0.67
COMMD4-224ENST00000568877 ADD3Q9UEY8 706 aaKnown RBP19.23■□□□□ 0.67
COMMD4-224ENST00000568877 SMC3Q9UQE7 1217 aa19.23■□□□□ 0.67
COMMD4-224ENST00000568877 GJB2P29033 226 aa19.22■□□□□ 0.67
COMMD4-224ENST00000568877 UBE2SQ16763 222 aa19.22■□□□□ 0.67
COMMD4-224ENST00000568877 OLFML2BQ68BL8 750 aa19.22■□□□□ 0.67
COMMD4-224ENST00000568877 FCHSD1Q86WN1 690 aa19.22■□□□□ 0.67
COMMD4-224ENST00000568877 SLAIN1Q8ND83 568 aa19.22■□□□□ 0.67
COMMD4-224ENST00000568877 DNERQ8NFT8 737 aa19.22■□□□□ 0.67
COMMD4-224ENST00000568877 TAAR1Q96RJ0 339 aa19.22■□□□□ 0.67
COMMD4-224ENST00000568877 GJB4Q9NTQ9 266 aa19.22■□□□□ 0.67
COMMD4-224ENST00000568877 FLRT1Q9NZU1 646 aa19.22■□□□□ 0.67
COMMD4-224ENST00000568877 ASTN1O14525 1302 aa19.22■□□□□ 0.67
COMMD4-224ENST00000568877 DOCK3Q8IZD9 2030 aa19.22■□□□□ 0.67
COMMD4-224ENST00000568877 ELNP15502 786 aa19.21■□□□□ 0.67
COMMD4-224ENST00000568877 ALDH5A1P51649 535 aaPredicted RBP19.21■□□□□ 0.67
COMMD4-224ENST00000568877 GALNT17Q6IS24 598 aa19.21■□□□□ 0.67
COMMD4-224ENST00000568877 MAMDC4Q6UXC1 1216 aa19.21■□□□□ 0.67
COMMD4-224ENST00000568877 BICD2Q8TD16 824 aa19.21■□□□□ 0.67
COMMD4-224ENST00000568877 TRIB2Q92519 343 aa19.21■□□□□ 0.67
COMMD4-224ENST00000568877 RMDN3Q96TC7 470 aa19.21■□□□□ 0.67
COMMD4-224ENST00000568877 PHF20Q9BVI0 1012 aa19.21■□□□□ 0.67
COMMD4-224ENST00000568877 KCNJ14Q9UNX9 436 aa19.21■□□□□ 0.67
COMMD4-224ENST00000568877 KIF3AQ9Y496 699 aa19.21■□□□□ 0.67
COMMD4-224ENST00000568877 RBBP6Q7Z6E9 1792 aaKnown RBP19.2■□□□□ 0.66
COMMD4-224ENST00000568877 ASB14A6NK59 587 aa19.2■□□□□ 0.66
COMMD4-224ENST00000568877 IGHA2P01877 340 aa19.2■□□□□ 0.66
COMMD4-224ENST00000568877 GRK4P32298 578 aa19.2■□□□□ 0.66
COMMD4-224ENST00000568877 CLK2P49760 499 aaKnown RBP19.2■□□□□ 0.66
COMMD4-224ENST00000568877 FOSBP53539 338 aa19.2■□□□□ 0.66
COMMD4-224ENST00000568877 TRIM29Q14134 588 aa19.2■□□□□ 0.66
COMMD4-224ENST00000568877 MSL3Q8N5Y2 521 aaKnown RBP19.2■□□□□ 0.66
COMMD4-224ENST00000568877 NSUN6Q8TEA1 469 aaKnown RBP19.2■□□□□ 0.66
COMMD4-224ENST00000568877 C8orf76Q96K31 380 aa19.2■□□□□ 0.66
COMMD4-224ENST00000568877 TINF2Q9BSI4 451 aa19.2■□□□□ 0.66
COMMD4-224ENST00000568877 BIN2Q9UBW5 565 aaPredicted RBP19.2■□□□□ 0.66
COMMD4-224ENST00000568877 PCDHA4Q9UN74 947 aa19.2■□□□□ 0.66
COMMD4-224ENST00000568877 ZNFX1Q9P2E3 1918 aaKnown RBP19.19■□□□□ 0.66
COMMD4-224ENST00000568877 LOC102724159A0A0B4J2E5 919 aa19.19■□□□□ 0.66
COMMD4-224ENST00000568877 SPDYE3A6NKU9 549 aa19.19■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms