RNA–Protein interactions for RNA: ENST00000567109.5

CDH13-209, Transcript of cadherin 13, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CDH13, Length 8,042 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13-209ENST00000567109 PPP1R12AO14974 1030 aaPredicted RBP6.82□□□□□ -1.32
CDH13-209ENST00000567109 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP6.82□□□□□ -1.32
CDH13-209ENST00000567109 TNNC1P63316 161 aa6.82□□□□□ -1.32
CDH13-209ENST00000567109 FAM102BQ5T8I3 360 aa6.82□□□□□ -1.32
CDH13-209ENST00000567109 SCYL2Q6P3W7 929 aa6.82□□□□□ -1.32
CDH13-209ENST00000567109 NSMFQ6X4W1 530 aa6.82□□□□□ -1.32
CDH13-209ENST00000567109 APOL6Q9BWW8 343 aa6.82□□□□□ -1.32
CDH13-209ENST00000567109 MTFR1LQ9H019 292 aa6.82□□□□□ -1.32
CDH13-209ENST00000567109 MYH7P12883 1935 aa6.82□□□□□ -1.32
CDH13-209ENST00000567109 KDM6AO15550 1401 aaPredicted RBP6.82□□□□□ -1.32
CDH13-209ENST00000567109 FAM95CA0A1B0GW59 222 aa6.82□□□□□ -1.32
CDH13-209ENST00000567109 PDE8BO95263 885 aa6.82□□□□□ -1.32
CDH13-209ENST00000567109 MMP14P50281 582 aa6.82□□□□□ -1.32
CDH13-209ENST00000567109 DMP1Q13316 513 aaPredicted RBP6.82□□□□□ -1.32
CDH13-209ENST00000567109 PDE1CQ14123 709 aaPredicted RBP6.82□□□□□ -1.32
CDH13-209ENST00000567109 UBE3CQ15386 1083 aa6.82□□□□□ -1.32
CDH13-209ENST00000567109 PODNQ7Z5L7 613 aa6.82□□□□□ -1.32
CDH13-209ENST00000567109 SEPT8Q92599 483 aa6.82□□□□□ -1.32
CDH13-209ENST00000567109 MMTAG2Q9BU76 263 aaKnown RBP6.82□□□□□ -1.32
CDH13-209ENST00000567109 FTOQ9C0B1 505 aaKnown RBP eCLIP6.82□□□□□ -1.32
CDH13-209ENST00000567109 MOSPD1Q9UJG1 213 aa6.82□□□□□ -1.32
CDH13-209ENST00000567109 SLC13A4Q9UKG4 626 aa6.82□□□□□ -1.32
CDH13-209ENST00000567109 RABGAP1Q9Y3P9 1069 aa6.82□□□□□ -1.32
CDH13-209ENST00000567109 ANGPTL3Q9Y5C1 460 aa6.82□□□□□ -1.32
CDH13-209ENST00000567109 VIRMAQ69YN4 1812 aaKnown RBP6.82□□□□□ -1.32
CDH13-209ENST00000567109 SLC4A1P02730 911 aa6.82□□□□□ -1.32
CDH13-209ENST00000567109 LACTBP83111 547 aaPredicted RBP6.82□□□□□ -1.32
CDH13-209ENST00000567109 RABL6Q3YEC7 729 aaPredicted RBP6.82□□□□□ -1.32
CDH13-209ENST00000567109 TSHZ3Q63HK5 1081 aa6.82□□□□□ -1.32
CDH13-209ENST00000567109 FASTKD5Q7L8L6 764 aaKnown RBP6.82□□□□□ -1.32
CDH13-209ENST00000567109 SPATA5Q8NB90 893 aa6.82□□□□□ -1.32
CDH13-209ENST00000567109 MRPS27Q92552 414 aaKnown RBP6.82□□□□□ -1.32
CDH13-209ENST00000567109 ZNF804BA4D1E1 1349 aa6.82□□□□□ -1.32
CDH13-209ENST00000567109 ACTN4O43707 911 aaKnown RBP6.81□□□□□ -1.32
CDH13-209ENST00000567109 ZNF18P17022 549 aa6.81□□□□□ -1.32
CDH13-209ENST00000567109 RASSF2P50749 326 aa6.81□□□□□ -1.32
CDH13-209ENST00000567109 IQCB1Q15051 598 aa6.81□□□□□ -1.32
CDH13-209ENST00000567109 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP6.81□□□□□ -1.32
CDH13-209ENST00000567109 DDX55Q8NHQ9 600 aaKnown RBP eCLIP6.81□□□□□ -1.32
CDH13-209ENST00000567109 FAM71BQ8TC56 605 aa6.81□□□□□ -1.32
CDH13-209ENST00000567109 DDX27Q96GQ7 796 aaKnown RBP6.81□□□□□ -1.32
CDH13-209ENST00000567109 PYGLP06737 847 aa6.81□□□□□ -1.32
CDH13-209ENST00000567109 CASP2P42575 452 aa6.81□□□□□ -1.32
CDH13-209ENST00000567109 POLGP54098 1239 aaPredicted RBP6.81□□□□□ -1.32
CDH13-209ENST00000567109 RNF219Q5W0B1 726 aaPredicted RBP6.81□□□□□ -1.32
CDH13-209ENST00000567109 PDZD4Q76G19 769 aaPredicted RBP6.81□□□□□ -1.32
CDH13-209ENST00000567109 PDLIM2Q96JY6 352 aa6.81□□□□□ -1.32
CDH13-209ENST00000567109 UIMC1Q96RL1 719 aa6.81□□□□□ -1.32
CDH13-209ENST00000567109 GUCA1BQ9UMX6 200 aa6.81□□□□□ -1.32
CDH13-209ENST00000567109 KIAA1210Q9ULL0 1709 aa6.81□□□□□ -1.32
CDH13-209ENST00000567109 STAM2O75886 525 aa6.81□□□□□ -1.32
CDH13-209ENST00000567109 IGHDP01880 384 aa6.81□□□□□ -1.32
CDH13-209ENST00000567109 SAT1P21673 171 aa6.81□□□□□ -1.32
CDH13-209ENST00000567109 RFC1P35251 1148 aaPredicted RBP6.81□□□□□ -1.32
CDH13-209ENST00000567109 PRR5LQ6MZQ0 368 aa6.81□□□□□ -1.32
CDH13-209ENST00000567109 LRRC43Q8N309 656 aa6.81□□□□□ -1.32
CDH13-209ENST00000567109 PIDD1Q9HB75 910 aa6.81□□□□□ -1.32
CDH13-209ENST00000567109 ATF5Q9Y2D1 282 aaPredicted RBP6.81□□□□□ -1.32
CDH13-209ENST00000567109 BAZ2BQ9UIF8 2168 aaKnown RBP6.81□□□□□ -1.32
CDH13-209ENST00000567109 ECE1P42892 770 aa6.81□□□□□ -1.32
CDH13-209ENST00000567109 ANO6Q4KMQ2 910 aa6.81□□□□□ -1.32
CDH13-209ENST00000567109 LMNTD2Q8IXW0 634 aa6.81□□□□□ -1.32
CDH13-209ENST00000567109 KBTBD3Q8NAB2 608 aa6.81□□□□□ -1.32
CDH13-209ENST00000567109 RBSNQ9H1K0 784 aa6.81□□□□□ -1.32
CDH13-209ENST00000567109 GDPD2Q9HCC8 539 aa6.81□□□□□ -1.32
CDH13-209ENST00000567109 RPAP1Q9BWH6 1393 aaPredicted RBP6.81□□□□□ -1.32
CDH13-209ENST00000567109 CCNA1P78396 465 aa6.81□□□□□ -1.32
CDH13-209ENST00000567109 ZKSCAN8Q15776 578 aaPredicted RBP6.81□□□□□ -1.32
CDH13-209ENST00000567109 CACNA2D3Q8IZS8 1091 aa6.81□□□□□ -1.32
CDH13-209ENST00000567109 DCLK2Q8N568 766 aa6.81□□□□□ -1.32
CDH13-209ENST00000567109 SDCCAG3Q96C92 435 aa6.81□□□□□ -1.32
CDH13-209ENST00000567109 KRT12Q99456 494 aa6.81□□□□□ -1.32
CDH13-209ENST00000567109 RSRC2Q7L4I2 434 aaKnown RBP6.81□□□□□ -1.32
CDH13-209ENST00000567109 MCF2L2Q86YR7 1114 aa6.81□□□□□ -1.32
CDH13-209ENST00000567109 BBS5Q8N3I7 341 aa6.81□□□□□ -1.32
CDH13-209ENST00000567109 SLC17A8Q8NDX2 589 aa6.81□□□□□ -1.32
CDH13-209ENST00000567109 APPBP2Q92624 585 aa6.81□□□□□ -1.32
CDH13-209ENST00000567109 ABCC12Q96J65 1359 aa6.81□□□□□ -1.32
CDH13-209ENST00000567109 TBC1D7Q9P0N9 293 aa6.81□□□□□ -1.32
CDH13-209ENST00000567109 GAS7O60861 476 aa6.8□□□□□ -1.32
CDH13-209ENST00000567109 CSF1RP07333 972 aa6.8□□□□□ -1.32
CDH13-209ENST00000567109 LIG4P49917 911 aa6.8□□□□□ -1.32
CDH13-209ENST00000567109 NOP14P78316 857 aaKnown RBP6.8□□□□□ -1.32
CDH13-209ENST00000567109 TBCCQ15814 346 aa6.8□□□□□ -1.32
CDH13-209ENST00000567109 CCDC122Q5T0U0 273 aa6.8□□□□□ -1.32
CDH13-209ENST00000567109 CIAPIN1Q6FI81 312 aa6.8□□□□□ -1.32
CDH13-209ENST00000567109 NOC4LQ9BVI4 516 aaKnown RBP6.8□□□□□ -1.32
CDH13-209ENST00000567109 STAP2Q9UGK3 403 aa6.8□□□□□ -1.32
CDH13-209ENST00000567109 LUC7L2Q9Y383 392 aaKnown RBP6.8□□□□□ -1.32
CDH13-209ENST00000567109 NFKBIAP25963 317 aa6.8□□□□□ -1.32
CDH13-209ENST00000567109 IRX4P78413 519 aa6.8□□□□□ -1.32
CDH13-209ENST00000567109 PTPN12Q05209 780 aaKnown RBP6.8□□□□□ -1.32
CDH13-209ENST00000567109 HP1BP3Q5SSJ5 553 aaPredicted RBP6.8□□□□□ -1.32
CDH13-209ENST00000567109 TPH2Q8IWU9 490 aa6.8□□□□□ -1.32
CDH13-209ENST00000567109 NME8Q8N427 588 aa6.8□□□□□ -1.32
CDH13-209ENST00000567109 CSRNP1Q96S65 589 aa6.8□□□□□ -1.32
CDH13-209ENST00000567109 ORC6Q9Y5N6 252 aa6.8□□□□□ -1.32
CDH13-209ENST00000567109 SYNJ2BP-COX16A0A087WUM0 186 aa6.8□□□□□ -1.32
CDH13-209ENST00000567109 RXRAP19793 462 aa6.8□□□□□ -1.32
CDH13-209ENST00000567109 APOBRQ0VD83 1088 aa6.8□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms