RNA–Protein interactions for RNA: ENST00000566426.1

PDXDC1-213, Transcript of pyridoxal dependent decarboxylase domain containing 1, humanhuman

TSL 5

Gene PDXDC1, Length 283 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDXDC1-213ENST00000566426 VWCEQ96DN2 955 aa23.96■■□□□ 1.43
PDXDC1-213ENST00000566426 SLC9A7Q96T83 725 aa23.96■■□□□ 1.43
PDXDC1-213ENST00000566426 TRMT13Q9NUP7 481 aaKnown RBP23.96■■□□□ 1.43
PDXDC1-213ENST00000566426 CCPG1Q9ULG6 757 aa23.96■■□□□ 1.43
PDXDC1-213ENST00000566426 PRR12Q9ULL5 1215 aa23.96■■□□□ 1.43
PDXDC1-213ENST00000566426 COG5Q9UP83 839 aa23.96■■□□□ 1.43
PDXDC1-213ENST00000566426 MTCH2Q9Y6C9 303 aa23.96■■□□□ 1.43
PDXDC1-213ENST00000566426 XIRP2A4UGR9 3374 aa23.95■■□□□ 1.43
PDXDC1-213ENST00000566426 LOC102724159A0A0B4J2E5 919 aa23.95■■□□□ 1.42
PDXDC1-213ENST00000566426 CA3P07451 260 aa23.95■■□□□ 1.42
PDXDC1-213ENST00000566426 CYP2C9P11712 490 aa23.95■■□□□ 1.42
PDXDC1-213ENST00000566426 RFC2P35250 354 aa23.95■■□□□ 1.42
PDXDC1-213ENST00000566426 PWP2Q15269 919 aaKnown RBP23.95■■□□□ 1.42
PDXDC1-213ENST00000566426 BRDTQ58F21 947 aaPredicted RBP23.95■■□□□ 1.42
PDXDC1-213ENST00000566426 DEFB128Q7Z7B8 93 aa23.95■■□□□ 1.42
PDXDC1-213ENST00000566426 CHMP4CQ96CF2 233 aa23.95■■□□□ 1.42
PDXDC1-213ENST00000566426 WDR11Q9BZH6 1224 aa23.95■■□□□ 1.42
PDXDC1-213ENST00000566426 DDX49Q9Y6V7 483 aaKnown RBP23.95■■□□□ 1.42
PDXDC1-213ENST00000566426 KIF28PB7ZC32 967 aa23.94■■□□□ 1.42
PDXDC1-213ENST00000566426 KCNQ1P51787 676 aa23.94■■□□□ 1.42
PDXDC1-213ENST00000566426 PURAQ00577 322 aaKnown RBP23.94■■□□□ 1.42
PDXDC1-213ENST00000566426 PPARAQ07869 468 aa23.94■■□□□ 1.42
PDXDC1-213ENST00000566426 TMEM63BQ5T3F8 832 aa23.94■■□□□ 1.42
PDXDC1-213ENST00000566426 MTG1Q9BT17 334 aaPredicted RBP23.94■■□□□ 1.42
PDXDC1-213ENST00000566426 REV3LO60673 3130 aa23.93■■□□□ 1.42
PDXDC1-213ENST00000566426 TSPY2A6NKD2 308 aa23.93■■□□□ 1.42
PDXDC1-213ENST00000566426 ICAM1P05362 532 aa23.93■■□□□ 1.42
PDXDC1-213ENST00000566426 MYL3P08590 195 aa23.93■■□□□ 1.42
PDXDC1-213ENST00000566426 SNAP25P60880 206 aa23.93■■□□□ 1.42
PDXDC1-213ENST00000566426 RETREG2Q8NC44 543 aa23.93■■□□□ 1.42
PDXDC1-213ENST00000566426 TRANK1O15050 2925 aa23.93■■□□□ 1.42
PDXDC1-213ENST00000566426 LRRC37A2A6NM11 1700 aa23.93■■□□□ 1.42
PDXDC1-213ENST00000566426 PRRC2BQ5JSZ5 2229 aaKnown RBP23.92■■□□□ 1.42
PDXDC1-213ENST00000566426 RAD50Q92878 1312 aa23.92■■□□□ 1.42
PDXDC1-213ENST00000566426 RFXAPO00287 272 aa23.92■■□□□ 1.42
PDXDC1-213ENST00000566426 CERS4Q9HA82 394 aa23.92■■□□□ 1.42
PDXDC1-213ENST00000566426 ARIH1Q9Y4X5 557 aaPredicted RBP23.92■■□□□ 1.42
PDXDC1-213ENST00000566426 PITPNM1O00562 1244 aa23.91■■□□□ 1.42
PDXDC1-213ENST00000566426 KPNA6O60684 536 aa23.91■■□□□ 1.42
PDXDC1-213ENST00000566426 ALDH5A1P51649 535 aaPredicted RBP23.91■■□□□ 1.42
PDXDC1-213ENST00000566426 BAATQ14032 418 aaPredicted RBP23.91■■□□□ 1.42
PDXDC1-213ENST00000566426 FAM47CQ5HY64 1035 aa23.91■■□□□ 1.42
PDXDC1-213ENST00000566426 OR6J1Q8NGC5 347 aa23.91■■□□□ 1.42
PDXDC1-213ENST00000566426 PURBQ96QR8 312 aaKnown RBP23.91■■□□□ 1.42
PDXDC1-213ENST00000566426 MPHOSPH6Q99547 160 aaKnown RBP23.91■■□□□ 1.42
PDXDC1-213ENST00000566426 NKRFO15226 690 aaKnown RBP eCLIP23.9■■□□□ 1.42
PDXDC1-213ENST00000566426 TSHZ3Q63HK5 1081 aa23.9■■□□□ 1.42
PDXDC1-213ENST00000566426 NFRKBQ6P4R8 1299 aa23.9■■□□□ 1.42
PDXDC1-213ENST00000566426 DCAF4Q8WV16 495 aa23.9■■□□□ 1.42
PDXDC1-213ENST00000566426 FTOQ9C0B1 505 aaKnown RBP eCLIP23.9■■□□□ 1.42
PDXDC1-213ENST00000566426 HCN4Q9Y3Q4 1203 aa23.9■■□□□ 1.42
PDXDC1-213ENST00000566426 RBM47A0AV96 593 aaKnown RBP23.89■■□□□ 1.41
PDXDC1-213ENST00000566426 IQCF3P0C7M6 154 aa23.89■■□□□ 1.41
PDXDC1-213ENST00000566426 PTPN11Q06124 597 aaPredicted RBP23.89■■□□□ 1.41
PDXDC1-213ENST00000566426 BFSP2Q13515 415 aa23.89■■□□□ 1.41
PDXDC1-213ENST00000566426 CCDC96Q2M329 555 aa23.89■■□□□ 1.41
PDXDC1-213ENST00000566426 NBPF20Q3BBV1 942 aa23.89■■□□□ 1.41
PDXDC1-213ENST00000566426 HERC6Q8IVU3 1022 aa23.89■■□□□ 1.41
PDXDC1-213ENST00000566426 ARNTL2Q8WYA1 636 aa23.89■■□□□ 1.41
PDXDC1-213ENST00000566426 HLA-CQ95604 372 aa23.89■■□□□ 1.41
PDXDC1-213ENST00000566426 SEC62Q99442 399 aaKnown RBP23.89■■□□□ 1.41
PDXDC1-213ENST00000566426 RANBP17Q9H2T7 1088 aaKnown RBP23.89■■□□□ 1.41
PDXDC1-213ENST00000566426 IL17RBQ9NRM6 502 aa23.89■■□□□ 1.41
PDXDC1-213ENST00000566426 PTPDC1A2A3K4 754 aa23.88■■□□□ 1.41
PDXDC1-213ENST00000566426 TAP1Q03518 808 aa23.88■■□□□ 1.41
PDXDC1-213ENST00000566426 DCTPP1Q9H773 170 aa23.88■■□□□ 1.41
PDXDC1-213ENST00000566426 PNMA2Q9UL42 364 aa23.88■■□□□ 1.41
PDXDC1-213ENST00000566426 MTMR7Q9Y216 660 aa23.88■■□□□ 1.41
PDXDC1-213ENST00000566426 NOD1Q9Y239 953 aa23.88■■□□□ 1.41
PDXDC1-213ENST00000566426 DDX52Q9Y2R4 599 aaKnown RBP eCLIP23.88■■□□□ 1.41
PDXDC1-213ENST00000566426 TLL1O43897 1013 aa23.87■■□□□ 1.41
PDXDC1-213ENST00000566426 BAIAP3O94812 1187 aa23.87■■□□□ 1.41
PDXDC1-213ENST00000566426 PPP2R5BQ15173 497 aa23.87■■□□□ 1.41
PDXDC1-213ENST00000566426 EPOPA6NHQ4 379 aa23.86■■□□□ 1.41
PDXDC1-213ENST00000566426 RANBP6O60518 1105 aaKnown RBP23.86■■□□□ 1.41
PDXDC1-213ENST00000566426 NMT2O60551 498 aa23.86■■□□□ 1.41
PDXDC1-213ENST00000566426 HOXD11P31277 338 aaPredicted RBP23.86■■□□□ 1.41
PDXDC1-213ENST00000566426 PDE4DQ08499 809 aa23.86■■□□□ 1.41
PDXDC1-213ENST00000566426 ZMYM1Q5SVZ6 1142 aa23.86■■□□□ 1.41
PDXDC1-213ENST00000566426 BTNL9Q6UXG8 535 aa23.86■■□□□ 1.41
PDXDC1-213ENST00000566426 LRFN3Q9BTN0 628 aa23.86■■□□□ 1.41
PDXDC1-213ENST00000566426 FSD1Q9BTV5 496 aa23.86■■□□□ 1.41
PDXDC1-213ENST00000566426 EPHX3Q9H6B9 360 aa23.86■■□□□ 1.41
PDXDC1-213ENST00000566426 SCN5AQ14524 2016 aa23.86■■□□□ 1.41
PDXDC1-213ENST00000566426 TTC41PQ6P2S7 1318 aa23.85■■□□□ 1.41
PDXDC1-213ENST00000566426 B4DLN1 442 aa23.85■■□□□ 1.41
PDXDC1-213ENST00000566426 NFIBO00712 420 aa23.85■■□□□ 1.41
PDXDC1-213ENST00000566426 KCNJ6P48051 423 aa23.85■■□□□ 1.41
PDXDC1-213ENST00000566426 MRPL12P52815 198 aaKnown RBP23.85■■□□□ 1.41
PDXDC1-213ENST00000566426 TMEM31Q5JXX7 168 aa23.85■■□□□ 1.41
PDXDC1-213ENST00000566426 SYDE2Q5VT97 1194 aa23.85■■□□□ 1.41
PDXDC1-213ENST00000566426 KRT40Q6A162 431 aa23.85■■□□□ 1.41
PDXDC1-213ENST00000566426 SCFD2Q8WU76 684 aa23.85■■□□□ 1.41
PDXDC1-213ENST00000566426 SCN10AQ9Y5Y9 1956 aa23.84■■□□□ 1.41
PDXDC1-213ENST00000566426 A6NJR5 290 aa23.84■■□□□ 1.41
PDXDC1-213ENST00000566426 CALML3P27482 149 aa23.84■■□□□ 1.41
PDXDC1-213ENST00000566426 SLC16A2P36021 539 aa23.84■■□□□ 1.41
PDXDC1-213ENST00000566426 NOVP48745 357 aa23.84■■□□□ 1.41
PDXDC1-213ENST00000566426 CTDSPL2Q05D32 466 aa23.84■■□□□ 1.41
PDXDC1-213ENST00000566426 RNF207Q6ZRF8 634 aa23.84■■□□□ 1.41
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms