RNA–Protein interactions for RNA: ENST00000565556.5

CNEP1R1-206, Transcript of CTD nuclear envelope phosphatase 1 regulatory subunit 1, humanhuman

TSL 1 (best) BASIC

Gene CNEP1R1, Length 1,707 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNEP1R1-206ENST00000565556 CEP131Q9UPN4 1083 aa10.69□□□□□ -0.7
CNEP1R1-206ENST00000565556 SPDYE5A6NIY4 337 aa10.68□□□□□ -0.7
CNEP1R1-206ENST00000565556 CXCL11O14625 94 aa10.68□□□□□ -0.7
CNEP1R1-206ENST00000565556 BMP15O95972 392 aa10.68□□□□□ -0.7
CNEP1R1-206ENST00000565556 HMGCS2P54868 508 aa10.68□□□□□ -0.7
CNEP1R1-206ENST00000565556 SLC39A14Q15043 492 aa10.68□□□□□ -0.7
CNEP1R1-206ENST00000565556 SF3A1Q15459 793 aaKnown RBP10.68□□□□□ -0.7
CNEP1R1-206ENST00000565556 REXO1Q8N1G1 1221 aaKnown RBP10.68□□□□□ -0.7
CNEP1R1-206ENST00000565556 LINC00301Q8NCQ3 95 aa10.68□□□□□ -0.7
CNEP1R1-206ENST00000565556 PSTPIP2Q9H939 334 aa10.68□□□□□ -0.7
CNEP1R1-206ENST00000565556 ELP3Q9H9T3 547 aa10.68□□□□□ -0.7
CNEP1R1-206ENST00000565556 NMRK2Q9NPI5 230 aa10.68□□□□□ -0.7
CNEP1R1-206ENST00000565556 NRBP1Q9UHY1 535 aa10.68□□□□□ -0.7
CNEP1R1-206ENST00000565556 PCDHA6Q9UN73 950 aa10.68□□□□□ -0.7
CNEP1R1-206ENST00000565556 PCDHA8Q9Y5H6 950 aa10.68□□□□□ -0.7
CNEP1R1-206ENST00000565556 CLIC4Q9Y696 253 aa10.68□□□□□ -0.7
CNEP1R1-206ENST00000565556 SPTLC2O15270 562 aa10.67□□□□□ -0.7
CNEP1R1-206ENST00000565556 FLOT1O75955 427 aa10.67□□□□□ -0.7
CNEP1R1-206ENST00000565556 TOB1P50616 345 aaPredicted RBP10.67□□□□□ -0.7
CNEP1R1-206ENST00000565556 PPIL2Q13356 520 aa10.67□□□□□ -0.7
CNEP1R1-206ENST00000565556 CCDC73Q6ZRK6 1079 aa10.67□□□□□ -0.7
CNEP1R1-206ENST00000565556 PIK3AP1Q6ZUJ8 805 aa10.67□□□□□ -0.7
CNEP1R1-206ENST00000565556 CACTINQ8WUQ7 758 aaKnown RBP10.67□□□□□ -0.7
CNEP1R1-206ENST00000565556 ZHX1Q9UKY1 873 aaPredicted RBP10.67□□□□□ -0.7
CNEP1R1-206ENST00000565556 PPP1R9AQ9ULJ8 1098 aa10.67□□□□□ -0.7
CNEP1R1-206ENST00000565556 CTDP1Q9Y5B0 961 aaPredicted RBP10.67□□□□□ -0.7
CNEP1R1-206ENST00000565556 MORC2Q9Y6X9 1032 aaPredicted RBP10.67□□□□□ -0.7
CNEP1R1-206ENST00000565556 PTPRFP10586 1907 aa10.67□□□□□ -0.7
CNEP1R1-206ENST00000565556 SPDYE4A6NLX3 237 aa10.67□□□□□ -0.7
CNEP1R1-206ENST00000565556 USP17L15C9J2P7 530 aa10.67□□□□□ -0.7
CNEP1R1-206ENST00000565556 USP17L13C9JLJ4 530 aa10.67□□□□□ -0.7
CNEP1R1-206ENST00000565556 USP17L11C9JVI0 530 aa10.67□□□□□ -0.7
CNEP1R1-206ENST00000565556 USP17L18D6R9N7 530 aa10.67□□□□□ -0.7
CNEP1R1-206ENST00000565556 USP17L22D6RA61 530 aa10.67□□□□□ -0.7
CNEP1R1-206ENST00000565556 USP17L17D6RBQ6 530 aa10.67□□□□□ -0.7
CNEP1R1-206ENST00000565556 USP17L19D6RCP7 530 aa10.67□□□□□ -0.7
CNEP1R1-206ENST00000565556 USP17L20D6RJB6 530 aa10.67□□□□□ -0.7
CNEP1R1-206ENST00000565556 TRAF5O00463 557 aa10.67□□□□□ -0.7
CNEP1R1-206ENST00000565556 ZBED4O75132 1171 aa10.67□□□□□ -0.7
CNEP1R1-206ENST00000565556 PPP6R2O75170 966 aa10.67□□□□□ -0.7
CNEP1R1-206ENST00000565556 ME1P48163 572 aa10.67□□□□□ -0.7
CNEP1R1-206ENST00000565556 USP17L24Q0WX57 530 aa10.67□□□□□ -0.7
CNEP1R1-206ENST00000565556 COG2Q14746 738 aa10.67□□□□□ -0.7
CNEP1R1-206ENST00000565556 IQCB1Q15051 598 aa10.67□□□□□ -0.7
CNEP1R1-206ENST00000565556 NONOQ15233 471 aaKnown RBP eCLIP10.67□□□□□ -0.7
CNEP1R1-206ENST00000565556 CEP135Q66GS9 1140 aa10.67□□□□□ -0.7
CNEP1R1-206ENST00000565556 CHADLQ6NUI6 762 aa10.67□□□□□ -0.7
CNEP1R1-206ENST00000565556 SAMD1Q6SPF0 538 aaPredicted RBP10.67□□□□□ -0.7
CNEP1R1-206ENST00000565556 MOB2Q70IA6 237 aa10.67□□□□□ -0.7
CNEP1R1-206ENST00000565556 C2orf69Q8N8R5 385 aa10.67□□□□□ -0.7
CNEP1R1-206ENST00000565556 PROCA1Q8NCQ7 364 aaPredicted RBP10.67□□□□□ -0.7
CNEP1R1-206ENST00000565556 SLC10A4Q96EP9 437 aa10.67□□□□□ -0.7
CNEP1R1-206ENST00000565556 FTOQ9C0B1 505 aaKnown RBP eCLIP10.67□□□□□ -0.7
CNEP1R1-206ENST00000565556 ZNF408Q9H9D4 720 aa10.67□□□□□ -0.7
CNEP1R1-206ENST00000565556 EIF4ENIF1Q9NRA8 985 aaKnown RBP10.67□□□□□ -0.7
CNEP1R1-206ENST00000565556 FBXO28Q9NVF7 368 aa10.67□□□□□ -0.7
CNEP1R1-206ENST00000565556 MRPL11Q9Y3B7 192 aaKnown RBP10.67□□□□□ -0.7
CNEP1R1-206ENST00000565556 PARP14Q460N5 1801 aa10.66□□□□□ -0.7
CNEP1R1-206ENST00000565556 ABCB11O95342 1321 aa10.66□□□□□ -0.7
CNEP1R1-206ENST00000565556 MYPNQ86TC9 1320 aa10.66□□□□□ -0.7
CNEP1R1-206ENST00000565556 KINO60870 393 aaKnown RBP10.66□□□□□ -0.7
CNEP1R1-206ENST00000565556 ICAM1P05362 532 aa10.66□□□□□ -0.7
CNEP1R1-206ENST00000565556 SNAP25P60880 206 aa10.66□□□□□ -0.7
CNEP1R1-206ENST00000565556 PTPAQ15257 358 aa10.66□□□□□ -0.7
CNEP1R1-206ENST00000565556 USH1GQ495M9 461 aa10.66□□□□□ -0.7
CNEP1R1-206ENST00000565556 EARS2Q5JPH6 523 aaKnown RBP10.66□□□□□ -0.7
CNEP1R1-206ENST00000565556 TTC38Q5R3I4 469 aa10.66□□□□□ -0.7
CNEP1R1-206ENST00000565556 CCDC174Q6PII3 467 aa10.66□□□□□ -0.7
CNEP1R1-206ENST00000565556 CATSPERGQ6ZRH7 1159 aa10.66□□□□□ -0.7
CNEP1R1-206ENST00000565556 LRRC8AQ8IWT6 810 aa10.66□□□□□ -0.7
CNEP1R1-206ENST00000565556 CEP57L1Q8IYX8 460 aa10.66□□□□□ -0.7
CNEP1R1-206ENST00000565556 ZNF526Q8TF50 670 aaPredicted RBP10.66□□□□□ -0.7
CNEP1R1-206ENST00000565556 OTUD5Q96G74 571 aa10.66□□□□□ -0.7
CNEP1R1-206ENST00000565556 CLMNQ96JQ2 1002 aa10.66□□□□□ -0.7
CNEP1R1-206ENST00000565556 SLC38A10Q9HBR0 1119 aa10.66□□□□□ -0.7
CNEP1R1-206ENST00000565556 GBA2Q9HCG7 927 aaPredicted RBP10.66□□□□□ -0.7
CNEP1R1-206ENST00000565556 ANO10Q9NW15 660 aa10.66□□□□□ -0.7
CNEP1R1-206ENST00000565556 HOXC10Q9NYD6 342 aa10.66□□□□□ -0.7
CNEP1R1-206ENST00000565556 BIN2Q9UBW5 565 aaPredicted RBP10.66□□□□□ -0.7
CNEP1R1-206ENST00000565556 KCNH4Q9UQ05 1017 aa10.66□□□□□ -0.7
CNEP1R1-206ENST00000565556 LOC285556D6RIA3 1793 aa10.66□□□□□ -0.7
CNEP1R1-206ENST00000565556 A0A0G2JLL6 359 aaPredicted RBP10.65□□□□□ -0.7
CNEP1R1-206ENST00000565556 FAM205CA6NFA0 338 aa10.65□□□□□ -0.7
CNEP1R1-206ENST00000565556 BECN2A8MW95 431 aa10.65□□□□□ -0.7
CNEP1R1-206ENST00000565556 KIF2AO00139 706 aaPredicted RBP10.65□□□□□ -0.7
CNEP1R1-206ENST00000565556 FOSP01100 380 aaPredicted RBP10.65□□□□□ -0.7
CNEP1R1-206ENST00000565556 ATP2B1P20020 1258 aa10.65□□□□□ -0.7
CNEP1R1-206ENST00000565556 CLK2P49760 499 aaKnown RBP10.65□□□□□ -0.7
CNEP1R1-206ENST00000565556 GSDMDP57764 484 aa10.65□□□□□ -0.7
CNEP1R1-206ENST00000565556 GABPB1Q06547 395 aaPredicted RBP10.65□□□□□ -0.7
CNEP1R1-206ENST00000565556 AP3B2Q13367 1082 aa10.65□□□□□ -0.7
CNEP1R1-206ENST00000565556 ORC2Q13416 577 aaPredicted RBP10.65□□□□□ -0.7
CNEP1R1-206ENST00000565556 DGKZQ13574 1117 aa10.65□□□□□ -0.7
CNEP1R1-206ENST00000565556 CCDC144BQ3MJ40 725 aa10.65□□□□□ -0.7
CNEP1R1-206ENST00000565556 ADALQ6DHV7 355 aa10.65□□□□□ -0.7
CNEP1R1-206ENST00000565556 C11orf57Q6ZUT1 292 aaPredicted RBP10.65□□□□□ -0.7
CNEP1R1-206ENST00000565556 FASTKD5Q7L8L6 764 aaKnown RBP10.65□□□□□ -0.7
CNEP1R1-206ENST00000565556 PRRT2Q7Z6L0 340 aaPredicted RBP10.65□□□□□ -0.7
CNEP1R1-206ENST00000565556 CCAR1Q8IX12 1150 aaKnown RBP10.65□□□□□ -0.7
CNEP1R1-206ENST00000565556 SAMD3Q8N6K7 520 aa10.65□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms