RNA–Protein interactions for RNA: ENST00000565471.6

CLN6-206, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 2 BASIC

Gene CLN6, Length 1,075 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-206ENST00000565471 RGS22Q8NE09 1264 aa23.25■■□□□ 1.31
CLN6-206ENST00000565471 VTI1AQ96AJ9 217 aa23.25■■□□□ 1.31
CLN6-206ENST00000565471 MPHOSPH6Q99547 160 aaKnown RBP23.25■■□□□ 1.31
CLN6-206ENST00000565471 CPVLQ9H3G5 476 aa23.25■■□□□ 1.31
CLN6-206ENST00000565471 TBX21Q9UL17 535 aa23.25■■□□□ 1.31
CLN6-206ENST00000565471 PARP1P09874 1014 aaKnown RBP23.24■■□□□ 1.31
CLN6-206ENST00000565471 CALML3P27482 149 aa23.24■■□□□ 1.31
CLN6-206ENST00000565471 CDC37Q16543 378 aaPredicted RBP23.24■■□□□ 1.31
CLN6-206ENST00000565471 C9orf50Q5SZB4 431 aa23.24■■□□□ 1.31
CLN6-206ENST00000565471 KIAA1211Q6ZU35 1233 aa23.24■■□□□ 1.31
CLN6-206ENST00000565471 DNERQ8NFT8 737 aa23.24■■□□□ 1.31
CLN6-206ENST00000565471 RBM47A0AV96 593 aaKnown RBP23.23■■□□□ 1.31
CLN6-206ENST00000565471 DYNC1LI2O43237 492 aaPredicted RBP23.23■■□□□ 1.31
CLN6-206ENST00000565471 ZEB2O60315 1214 aa23.23■■□□□ 1.31
CLN6-206ENST00000565471 SEC23AQ15436 765 aa23.23■■□□□ 1.31
CLN6-206ENST00000565471 USH1GQ495M9 461 aa23.23■■□□□ 1.31
CLN6-206ENST00000565471 DUSP28Q4G0W2 176 aa23.23■■□□□ 1.31
CLN6-206ENST00000565471 IFIT1BQ5T764 474 aaKnown RBP23.23■■□□□ 1.31
CLN6-206ENST00000565471 FAM109BQ6ICB4 259 aaPredicted RBP23.23■■□□□ 1.31
CLN6-206ENST00000565471 ADGRF4Q8IZF3 695 aa23.23■■□□□ 1.31
CLN6-206ENST00000565471 SEZ6LQ9BYH1 1024 aa23.23■■□□□ 1.31
CLN6-206ENST00000565471 U3KPZ7 1027 aaPredicted RBP23.23■■□□□ 1.31
CLN6-206ENST00000565471 ABCB11O95342 1321 aa23.23■■□□□ 1.31
CLN6-206ENST00000565471 EDNRBP24530 442 aa23.22■■□□□ 1.31
CLN6-206ENST00000565471 FPGSQ05932 587 aa23.22■■□□□ 1.31
CLN6-206ENST00000565471 TRDNQ13061 729 aa23.22■■□□□ 1.31
CLN6-206ENST00000565471 CXCL17Q6UXB2 119 aa23.22■■□□□ 1.31
CLN6-206ENST00000565471 Q7L0L9 218 aa23.22■■□□□ 1.31
CLN6-206ENST00000565471 FAM126BQ8IXS8 530 aa23.22■■□□□ 1.31
CLN6-206ENST00000565471 MTMR10Q9NXD2 777 aa23.22■■□□□ 1.31
CLN6-206ENST00000565471 B4DLN1 442 aa23.21■■□□□ 1.31
CLN6-206ENST00000565471 TLR3O15455 904 aaKnown RBP23.21■■□□□ 1.31
CLN6-206ENST00000565471 SGSM2O43147 1006 aa23.21■■□□□ 1.31
CLN6-206ENST00000565471 TIMP1P01033 207 aa23.21■■□□□ 1.31
CLN6-206ENST00000565471 CYP21A2P08686 494 aa23.21■■□□□ 1.31
CLN6-206ENST00000565471 MRPL12P52815 198 aaKnown RBP23.21■■□□□ 1.31
CLN6-206ENST00000565471 PTH1RQ03431 593 aa23.21■■□□□ 1.31
CLN6-206ENST00000565471 PDE4DQ08499 809 aa23.21■■□□□ 1.31
CLN6-206ENST00000565471 CYB5R4Q7L1T6 521 aa23.21■■□□□ 1.31
CLN6-206ENST00000565471 SLC43A3Q8NBI5 491 aa23.21■■□□□ 1.31
CLN6-206ENST00000565471 WDR11Q9BZH6 1224 aa23.21■■□□□ 1.31
CLN6-206ENST00000565471 PTGS1P23219 599 aa23.2■■□□□ 1.3
CLN6-206ENST00000565471 QRICH1Q2TAL8 776 aa23.2■■□□□ 1.3
CLN6-206ENST00000565471 TMEM63BQ5T3F8 832 aa23.2■■□□□ 1.3
CLN6-206ENST00000565471 JMJD4Q9H9V9 463 aa23.2■■□□□ 1.3
CLN6-206ENST00000565471 CD4P01730 458 aa23.19■■□□□ 1.3
CLN6-206ENST00000565471 EPHB4P54760 987 aa23.19■■□□□ 1.3
CLN6-206ENST00000565471 ITGA7Q13683 1181 aa23.19■■□□□ 1.3
CLN6-206ENST00000565471 MCF2L2Q86YR7 1114 aa23.19■■□□□ 1.3
CLN6-206ENST00000565471 NKRFO15226 690 aaKnown RBP eCLIP23.18■■□□□ 1.39e-7■■■■□ 22.5
CLN6-206ENST00000565471 DHX16O60231 1041 aaKnown RBP23.18■■□□□ 1.3
CLN6-206ENST00000565471 MFSD5Q6N075 450 aa23.18■■□□□ 1.3
CLN6-206ENST00000565471 FBXO11Q86XK2 927 aa23.18■■□□□ 1.3
CLN6-206ENST00000565471 SCFD2Q8WU76 684 aa23.18■■□□□ 1.3
CLN6-206ENST00000565471 STXBP5LQ9Y2K9 1186 aa23.18■■□□□ 1.3
CLN6-206ENST00000565471 MRPL11Q9Y3B7 192 aaKnown RBP23.18■■□□□ 1.3
CLN6-206ENST00000565471 MYH6P13533 1939 aa23.18■■□□□ 1.3
CLN6-206ENST00000565471 SMAD3P84022 425 aaKnown RBP23.17■■□□□ 1.3
CLN6-206ENST00000565471 STAG2Q8N3U4 1231 aa23.17■■□□□ 1.3
CLN6-206ENST00000565471 RNPC3Q96LT9 517 aaKnown RBP23.17■■□□□ 1.3
CLN6-206ENST00000565471 POLR3EQ9NVU0 708 aa23.17■■□□□ 1.3
CLN6-206ENST00000565471 GRIN2DO15399 1336 aa23.16■■□□□ 1.3
CLN6-206ENST00000565471 KLRF2D3W0D1 207 aa23.16■■□□□ 1.3
CLN6-206ENST00000565471 CPT1AP50416 773 aa23.16■■□□□ 1.3
CLN6-206ENST00000565471 PPP2R5BQ15173 497 aa23.16■■□□□ 1.3
CLN6-206ENST00000565471 RALYLQ86SE5 291 aaKnown RBP23.16■■□□□ 1.3
CLN6-206ENST00000565471 NCOA7Q8NI08 942 aa23.16■■□□□ 1.3
CLN6-206ENST00000565471 SYTL5Q8TDW5 730 aaPredicted RBP23.16■■□□□ 1.3
CLN6-206ENST00000565471 MAP4K1Q92918 833 aa23.16■■□□□ 1.3
CLN6-206ENST00000565471 MTMR8Q96EF0 704 aa23.16■■□□□ 1.3
CLN6-206ENST00000565471 AMNQ9BXJ7 453 aa23.16■■□□□ 1.3
CLN6-206ENST00000565471 VAT1LQ9HCJ6 419 aa23.16■■□□□ 1.3
CLN6-206ENST00000565471 MAD2L2Q9UI95 211 aa23.16■■□□□ 1.3
CLN6-206ENST00000565471 ERICH2A1L162 156 aa23.15■■□□□ 1.3
CLN6-206ENST00000565471 PALM3A6NDB9 673 aaPredicted RBP23.15■■□□□ 1.3
CLN6-206ENST00000565471 E7EWF7 191 aa23.15■■□□□ 1.3
CLN6-206ENST00000565471 IFIT3O14879 490 aaKnown RBP23.15■■□□□ 1.3
CLN6-206ENST00000565471 PPIGQ13427 754 aaKnown RBP eCLIP23.15■■□□□ 1.37e-7■□□□□ 9.4
CLN6-206ENST00000565471 ZNF697Q5TEC3 545 aa23.15■■□□□ 1.3
CLN6-206ENST00000565471 TMEM199Q8N511 208 aa23.15■■□□□ 1.3
CLN6-206ENST00000565471 OR6J1Q8NGC5 347 aa23.15■■□□□ 1.3
CLN6-206ENST00000565471 NSUN6Q8TEA1 469 aaKnown RBP23.15■■□□□ 1.3
CLN6-206ENST00000565471 TBC1D5Q92609 795 aa23.15■■□□□ 1.3
CLN6-206ENST00000565471 GHRHRQ02643 423 aa23.14■■□□□ 1.29
CLN6-206ENST00000565471 GRM4Q14833 912 aa23.14■■□□□ 1.29
CLN6-206ENST00000565471 SART3Q15020 963 aaKnown RBP23.14■■□□□ 1.29
CLN6-206ENST00000565471 BRDTQ58F21 947 aaPredicted RBP23.14■■□□□ 1.29
CLN6-206ENST00000565471 TAAR1Q96RJ0 339 aa23.14■■□□□ 1.29
CLN6-206ENST00000565471 IWS1Q96ST2 819 aa23.14■■□□□ 1.29
CLN6-206ENST00000565471 COL20A1Q9P218 1284 aa23.14■■□□□ 1.29
CLN6-206ENST00000565471 TAF6LQ9Y6J9 622 aa23.14■■□□□ 1.29
CLN6-206ENST00000565471 ZBTB5O15062 677 aa23.13■■□□□ 1.29
CLN6-206ENST00000565471 PSMC6P62333 389 aa23.13■■□□□ 1.29
CLN6-206ENST00000565471 PURAQ00577 322 aaKnown RBP23.13■■□□□ 1.29
CLN6-206ENST00000565471 TTLL4Q14679 1199 aa23.13■■□□□ 1.29
CLN6-206ENST00000565471 WTAPQ15007 396 aa23.13■■□□□ 1.29
CLN6-206ENST00000565471 STOX1Q6ZVD7 989 aa23.13■■□□□ 1.29
CLN6-206ENST00000565471 PPP1R12CQ9BZL4 782 aa23.13■■□□□ 1.29
CLN6-206ENST00000565471 A6NJR5 290 aa23.12■■□□□ 1.29
CLN6-206ENST00000565471 KPNA6O60684 536 aa23.12■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms