RNA–Protein interactions for RNA: ENST00000565248.1

THUMPD1-203, Transcript of THUMP domain containing 1, humanhuman

TSL 3

Gene THUMPD1, Length 1,099 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THUMPD1-203ENST00000565248 MTMR8Q96EF0 704 aa18.78■□□□□ 0.6
THUMPD1-203ENST00000565248 C12orf42Q96LP6 360 aa18.78■□□□□ 0.6
THUMPD1-203ENST00000565248 C6orf50Q9HD87 102 aa18.78■□□□□ 0.6
THUMPD1-203ENST00000565248 GJB4Q9NTQ9 266 aa18.78■□□□□ 0.6
THUMPD1-203ENST00000565248 PNMA3Q9UL41 463 aa18.78■□□□□ 0.6
THUMPD1-203ENST00000565248 STXBP3O00186 592 aa18.77■□□□□ 0.6
THUMPD1-203ENST00000565248 GNA11P29992 359 aa18.77■□□□□ 0.6
THUMPD1-203ENST00000565248 NFKBIBQ15653 356 aa18.77■□□□□ 0.6
THUMPD1-203ENST00000565248 CDC37Q16543 378 aaPredicted RBP18.77■□□□□ 0.6
THUMPD1-203ENST00000565248 FOXD4L6Q3SYB3 417 aaPredicted RBP18.77■□□□□ 0.6
THUMPD1-203ENST00000565248 KIAA1755Q5JYT7 1200 aa18.77■□□□□ 0.6
THUMPD1-203ENST00000565248 FOXD4L3Q6VB84 417 aaPredicted RBP18.77■□□□□ 0.6
THUMPD1-203ENST00000565248 C7orf61Q8IZ16 206 aa18.77■□□□□ 0.6
THUMPD1-203ENST00000565248 BICD2Q8TD16 824 aa18.77■□□□□ 0.6
THUMPD1-203ENST00000565248 GDF15Q99988 308 aa18.77■□□□□ 0.6
THUMPD1-203ENST00000565248 TANGO6Q9C0B7 1094 aa18.77■□□□□ 0.6
THUMPD1-203ENST00000565248 XRN2Q9H0D6 950 aaKnown RBP eCLIP18.77■□□□□ 0.6
THUMPD1-203ENST00000565248 CFAP45Q9UL16 551 aa18.77■□□□□ 0.6
THUMPD1-203ENST00000565248 PRR12Q9ULL5 1215 aa18.77■□□□□ 0.6
THUMPD1-203ENST00000565248 CUL9Q8IWT3 2517 aa18.76■□□□□ 0.59
THUMPD1-203ENST00000565248 VCAM1P19320 739 aa18.76■□□□□ 0.59
THUMPD1-203ENST00000565248 U2AF2P26368 475 aaKnown RBP eCLIP18.76■□□□□ 0.59
THUMPD1-203ENST00000565248 QRICH1Q2TAL8 776 aa18.76■□□□□ 0.59
THUMPD1-203ENST00000565248 NOSTRINQ8IVI9 506 aa18.76■□□□□ 0.59
THUMPD1-203ENST00000565248 ANKRD13CQ8N6S4 541 aa18.76■□□□□ 0.59
THUMPD1-203ENST00000565248 KIFC2Q96AC6 838 aa18.76■□□□□ 0.59
THUMPD1-203ENST00000565248 SLF1Q9BQI6 1058 aa18.76■□□□□ 0.59
THUMPD1-203ENST00000565248 GLT8D2Q9H1C3 349 aa18.76■□□□□ 0.59
THUMPD1-203ENST00000565248 EMILIN3Q9NT22 766 aa18.76■□□□□ 0.59
THUMPD1-203ENST00000565248 PNMA2Q9UL42 364 aa18.76■□□□□ 0.59
THUMPD1-203ENST00000565248 AGTPBP1Q9UPW5 1226 aa18.76■□□□□ 0.59
THUMPD1-203ENST00000565248 CTDP1Q9Y5B0 961 aaPredicted RBP18.76■□□□□ 0.59
THUMPD1-203ENST00000565248 ALPK3Q96L96 1907 aa18.76■□□□□ 0.59
THUMPD1-203ENST00000565248 PTPRFP10586 1907 aa18.75■□□□□ 0.59
THUMPD1-203ENST00000565248 ESYT2A0FGR8 921 aa18.75■□□□□ 0.59
THUMPD1-203ENST00000565248 FDX1P10109 184 aa18.75■□□□□ 0.59
THUMPD1-203ENST00000565248 HMGCS2P54868 508 aa18.75■□□□□ 0.59
THUMPD1-203ENST00000565248 SH3D19Q5HYK7 790 aa18.75■□□□□ 0.59
THUMPD1-203ENST00000565248 FBXO11Q86XK2 927 aa18.75■□□□□ 0.59
THUMPD1-203ENST00000565248 PRPF38AQ8NAV1 312 aaKnown RBP18.75■□□□□ 0.59
THUMPD1-203ENST00000565248 DAGLBQ8NCG7 672 aa18.75■□□□□ 0.59
THUMPD1-203ENST00000565248 AMNQ9BXJ7 453 aa18.75■□□□□ 0.59
THUMPD1-203ENST00000565248 SCAND2PQ9GZW5 306 aaPredicted RBP18.75■□□□□ 0.59
THUMPD1-203ENST00000565248 RPAP3Q9H6T3 665 aaPredicted RBP18.75■□□□□ 0.59
THUMPD1-203ENST00000565248 PCDHA4Q9UN74 947 aa18.75■□□□□ 0.59
THUMPD1-203ENST00000565248 DOCK3Q8IZD9 2030 aa18.74■□□□□ 0.59
THUMPD1-203ENST00000565248 BTBD18B2RXH4 712 aa18.74■□□□□ 0.59
THUMPD1-203ENST00000565248 HMGCRP04035 888 aa18.74■□□□□ 0.59
THUMPD1-203ENST00000565248 DNM1Q05193 864 aaKnown RBP18.74■□□□□ 0.59
THUMPD1-203ENST00000565248 FAM110CQ1W6H9 321 aa18.74■□□□□ 0.59
THUMPD1-203ENST00000565248 BLIDQ8IZY5 108 aa18.74■□□□□ 0.59
THUMPD1-203ENST00000565248 DIS3LQ8TF46 1054 aaKnown RBP18.74■□□□□ 0.59
THUMPD1-203ENST00000565248 HMX1Q9NP08 348 aaPredicted RBP18.74■□□□□ 0.59
THUMPD1-203ENST00000565248 ZMYND8Q9ULU4 1186 aaPredicted RBP18.74■□□□□ 0.59
THUMPD1-203ENST00000565248 NOL7Q9UMY1 257 aaKnown RBP18.74■□□□□ 0.59
THUMPD1-203ENST00000565248 STXBP5LQ9Y2K9 1186 aa18.74■□□□□ 0.59
THUMPD1-203ENST00000565248 BAZ2BQ9UIF8 2168 aaKnown RBP18.74■□□□□ 0.59
THUMPD1-203ENST00000565248 SMCO2A6NFE2 343 aa18.73■□□□□ 0.59
THUMPD1-203ENST00000565248 KIF28PB7ZC32 967 aa18.73■□□□□ 0.59
THUMPD1-203ENST00000565248 FLOT1O75955 427 aa18.73■□□□□ 0.59
THUMPD1-203ENST00000565248 GCLCP48506 637 aaPredicted RBP18.73■□□□□ 0.59
THUMPD1-203ENST00000565248 ADCY7P51828 1080 aa18.73■□□□□ 0.59
THUMPD1-203ENST00000565248 PABPC4Q13310 644 aaKnown RBP eCLIP18.73■□□□□ 0.59
THUMPD1-203ENST00000565248 LRIT3Q3SXY7 679 aa18.73■□□□□ 0.59
THUMPD1-203ENST00000565248 MYSM1Q5VVJ2 828 aa18.73■□□□□ 0.59
THUMPD1-203ENST00000565248 SAMD1Q6SPF0 538 aaPredicted RBP18.73■□□□□ 0.59
THUMPD1-203ENST00000565248 ZMYND12Q9H0C1 365 aa18.73■□□□□ 0.59
THUMPD1-203ENST00000565248 RANBP17Q9H2T7 1088 aaKnown RBP18.73■□□□□ 0.59
THUMPD1-203ENST00000565248 PCDHA1Q9Y5I3 950 aa18.73■□□□□ 0.59
THUMPD1-203ENST00000565248 RPTORQ8N122 1335 aa18.73■□□□□ 0.59
THUMPD1-203ENST00000565248 USP17L15C9J2P7 530 aa18.72■□□□□ 0.59
THUMPD1-203ENST00000565248 USP17L13C9JLJ4 530 aa18.72■□□□□ 0.59
THUMPD1-203ENST00000565248 USP17L11C9JVI0 530 aa18.72■□□□□ 0.59
THUMPD1-203ENST00000565248 USP17L18D6R9N7 530 aa18.72■□□□□ 0.59
THUMPD1-203ENST00000565248 USP17L22D6RA61 530 aa18.72■□□□□ 0.59
THUMPD1-203ENST00000565248 USP17L17D6RBQ6 530 aa18.72■□□□□ 0.59
THUMPD1-203ENST00000565248 USP17L19D6RCP7 530 aa18.72■□□□□ 0.59
THUMPD1-203ENST00000565248 USP17L20D6RJB6 530 aa18.72■□□□□ 0.59
THUMPD1-203ENST00000565248 ZBED4O75132 1171 aa18.72■□□□□ 0.59
THUMPD1-203ENST00000565248 MRPL12P52815 198 aaKnown RBP18.72■□□□□ 0.59
THUMPD1-203ENST00000565248 USP17L24Q0WX57 530 aa18.72■□□□□ 0.59
THUMPD1-203ENST00000565248 RILPL1Q5EBL4 403 aa18.72■□□□□ 0.59
THUMPD1-203ENST00000565248 TEX2Q8IWB9 1127 aa18.72■□□□□ 0.59
THUMPD1-203ENST00000565248 TDHQ8IZJ6 230 aa18.72■□□□□ 0.59
THUMPD1-203ENST00000565248 PROCA1Q8NCQ7 364 aaPredicted RBP18.72■□□□□ 0.59
THUMPD1-203ENST00000565248 CNPY2Q9Y2B0 182 aa18.72■□□□□ 0.59
THUMPD1-203ENST00000565248 PHIPQ8WWQ0 1821 aa18.72■□□□□ 0.59
THUMPD1-203ENST00000565248 CCDC194A0A1B0GVG4 234 aa18.71■□□□□ 0.59
THUMPD1-203ENST00000565248 FIBPO43427 364 aa18.71■□□□□ 0.59
THUMPD1-203ENST00000565248 MCTP2Q6DN12 878 aa18.71■□□□□ 0.59
THUMPD1-203ENST00000565248 FAM173BQ6P4H8 233 aa18.71■□□□□ 0.59
THUMPD1-203ENST00000565248 CUL5Q93034 780 aa18.71■□□□□ 0.59
THUMPD1-203ENST00000565248 C11orf49Q9H6J7 331 aa18.71■□□□□ 0.59
THUMPD1-203ENST00000565248 FBXO28Q9NVF7 368 aa18.71■□□□□ 0.59
THUMPD1-203ENST00000565248 PPP1R9AQ9ULJ8 1098 aa18.71■□□□□ 0.59
THUMPD1-203ENST00000565248 SYN1P17600 705 aa18.7■□□□□ 0.58
THUMPD1-203ENST00000565248 NR5A1Q13285 461 aa18.7■□□□□ 0.58
THUMPD1-203ENST00000565248 TYW1BQ6NUM6 668 aa18.7■□□□□ 0.58
THUMPD1-203ENST00000565248 KRT25Q7Z3Z0 450 aa18.7■□□□□ 0.58
THUMPD1-203ENST00000565248 REXO1Q8N1G1 1221 aaKnown RBP18.7■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms