RNA–Protein interactions for RNA: ENST00000564870.1

FANCA-216, Transcript of FA complementation group A, humanhuman

TSL 3

Gene FANCA, Length 460 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FANCA-216ENST00000564870 MYL3P08590 195 aa12.16□□□□□ -0.46
FANCA-216ENST00000564870 SUPT20HL2P0C7V6 817 aa12.16□□□□□ -0.46
FANCA-216ENST00000564870 KRT40Q6A162 431 aa12.16□□□□□ -0.46
FANCA-216ENST00000564870 RCSD1Q6JBY9 416 aa12.16□□□□□ -0.46
FANCA-216ENST00000564870 RASGRP2Q7LDG7 609 aa12.16□□□□□ -0.46
FANCA-216ENST00000564870 PPP1R13LQ8WUF5 828 aa12.16□□□□□ -0.46
FANCA-216ENST00000564870 GPATCH3Q96I76 525 aa12.16□□□□□ -0.46
FANCA-216ENST00000564870 SEC62Q99442 399 aaKnown RBP12.16□□□□□ -0.46
FANCA-216ENST00000564870 CHMP4BQ9H444 224 aaKnown RBP12.16□□□□□ -0.46
FANCA-216ENST00000564870 CCPG1Q9ULG6 757 aa12.16□□□□□ -0.46
FANCA-216ENST00000564870 PRR12Q9ULL5 1215 aa12.16□□□□□ -0.46
FANCA-216ENST00000564870 STX8Q9UNK0 236 aa12.16□□□□□ -0.46
FANCA-216ENST00000564870 MTCH2Q9Y6C9 303 aa12.16□□□□□ -0.46
FANCA-216ENST00000564870 GBF1Q92538 1859 aa12.16□□□□□ -0.46
FANCA-216ENST00000564870 PLIN4Q96Q06 1357 aa12.16□□□□□ -0.46
FANCA-216ENST00000564870 BRWD1Q9NSI6 2320 aa12.15□□□□□ -0.46
FANCA-216ENST00000564870 PLA2G6O60733 806 aa12.15□□□□□ -0.46
FANCA-216ENST00000564870 PFKMP08237 780 aa12.15□□□□□ -0.46
FANCA-216ENST00000564870 PPARAQ07869 468 aa12.15□□□□□ -0.46
FANCA-216ENST00000564870 BAATQ14032 418 aaPredicted RBP12.15□□□□□ -0.46
FANCA-216ENST00000564870 DUSP28Q4G0W2 176 aa12.15□□□□□ -0.46
FANCA-216ENST00000564870 FAM47CQ5HY64 1035 aa12.15□□□□□ -0.46
FANCA-216ENST00000564870 ARNTL2Q8WYA1 636 aa12.15□□□□□ -0.46
FANCA-216ENST00000564870 WDR11Q9BZH6 1224 aa12.15□□□□□ -0.46
FANCA-216ENST00000564870 NAPBQ9H115 298 aa12.15□□□□□ -0.46
FANCA-216ENST00000564870 INCENPQ9NQS7 918 aa12.15□□□□□ -0.46
FANCA-216ENST00000564870 GPHNQ9NQX3 736 aaPredicted RBP12.15□□□□□ -0.46
FANCA-216ENST00000564870 POLR3EQ9NVU0 708 aa12.15□□□□□ -0.46
FANCA-216ENST00000564870 NMT2O60551 498 aa12.14□□□□□ -0.47
FANCA-216ENST00000564870 ARHGEF15O94989 841 aa12.14□□□□□ -0.47
FANCA-216ENST00000564870 ACTN1P12814 892 aa12.14□□□□□ -0.47
FANCA-216ENST00000564870 POU3F3P20264 500 aaPredicted RBP12.14□□□□□ -0.47
FANCA-216ENST00000564870 PURAQ00577 322 aaKnown RBP12.14□□□□□ -0.47
FANCA-216ENST00000564870 CCDC96Q2M329 555 aa12.14□□□□□ -0.47
FANCA-216ENST00000564870 NBPF20Q3BBV1 942 aa12.14□□□□□ -0.47
FANCA-216ENST00000564870 OR6J1Q8NGC5 347 aa12.14□□□□□ -0.47
FANCA-216ENST00000564870 MORC4Q8TE76 937 aa12.14□□□□□ -0.47
FANCA-216ENST00000564870 MTG1Q9BT17 334 aaPredicted RBP12.14□□□□□ -0.47
FANCA-216ENST00000564870 FTOQ9C0B1 505 aaKnown RBP eCLIP12.14□□□□□ -0.47
FANCA-216ENST00000564870 EPHX3Q9H6B9 360 aa12.14□□□□□ -0.47
FANCA-216ENST00000564870 TSPY2A6NKD2 308 aa12.13□□□□□ -0.47
FANCA-216ENST00000564870 ICAM1P05362 532 aa12.13□□□□□ -0.47
FANCA-216ENST00000564870 SLC16A2P36021 539 aa12.13□□□□□ -0.47
FANCA-216ENST00000564870 CPT1AP50416 773 aa12.13□□□□□ -0.47
FANCA-216ENST00000564870 ALDH5A1P51649 535 aaPredicted RBP12.13□□□□□ -0.47
FANCA-216ENST00000564870 TAP1Q03518 808 aa12.13□□□□□ -0.47
FANCA-216ENST00000564870 CTDSPL2Q05D32 466 aa12.13□□□□□ -0.47
FANCA-216ENST00000564870 LRRFIP1Q32MZ4 808 aaKnown RBP12.13□□□□□ -0.47
FANCA-216ENST00000564870 PPP4R3BQ5MIZ7 849 aa12.13□□□□□ -0.47
FANCA-216ENST00000564870 TTBK2Q6IQ55 1244 aa12.13□□□□□ -0.47
FANCA-216ENST00000564870 RETREG2Q8NC44 543 aa12.13□□□□□ -0.47
FANCA-216ENST00000564870 SLC9A7Q96T83 725 aa12.13□□□□□ -0.47
FANCA-216ENST00000564870 IL17RBQ9NRM6 502 aa12.13□□□□□ -0.47
FANCA-216ENST00000564870 ADD3Q9UEY8 706 aaKnown RBP12.13□□□□□ -0.47
FANCA-216ENST00000564870 COG5Q9UP83 839 aa12.13□□□□□ -0.47
FANCA-216ENST00000564870 MUC6Q6W4X9 2439 aa12.13□□□□□ -0.47
FANCA-216ENST00000564870 PTPDC1A2A3K4 754 aa12.12□□□□□ -0.47
FANCA-216ENST00000564870 KIF28PB7ZC32 967 aa12.12□□□□□ -0.47
FANCA-216ENST00000564870 NFIBO00712 420 aa12.12□□□□□ -0.47
FANCA-216ENST00000564870 TLL1O43897 1013 aa12.12□□□□□ -0.47
FANCA-216ENST00000564870 RANBP6O60518 1105 aaKnown RBP12.12□□□□□ -0.47
FANCA-216ENST00000564870 RFC2P35250 354 aa12.12□□□□□ -0.47
FANCA-216ENST00000564870 CHMP4BP1P59074 171 aa12.12□□□□□ -0.47
FANCA-216ENST00000564870 BRDTQ58F21 947 aaPredicted RBP12.12□□□□□ -0.47
FANCA-216ENST00000564870 C20orf194Q5TEA3 1177 aa12.12□□□□□ -0.47
FANCA-216ENST00000564870 SPRED2Q7Z698 418 aa12.12□□□□□ -0.47
FANCA-216ENST00000564870 HERC6Q8IVU3 1022 aa12.12□□□□□ -0.47
FANCA-216ENST00000564870 PHOSPHO2Q8TCD6 241 aa12.12□□□□□ -0.47
FANCA-216ENST00000564870 HLA-CQ95604 372 aa12.12□□□□□ -0.47
FANCA-216ENST00000564870 LRFN3Q9BTN0 628 aa12.12□□□□□ -0.47
FANCA-216ENST00000564870 DDX52Q9Y2R4 599 aaKnown RBP eCLIP12.12□□□□□ -0.47
FANCA-216ENST00000564870 LRRC37A2A6NM11 1700 aa12.11□□□□□ -0.47
FANCA-216ENST00000564870 RBM47A0AV96 593 aaKnown RBP12.11□□□□□ -0.47
FANCA-216ENST00000564870 IQCF3P0C7M6 154 aa12.11□□□□□ -0.47
FANCA-216ENST00000564870 CALML3P27482 149 aa12.11□□□□□ -0.47
FANCA-216ENST00000564870 PDE4DQ08499 809 aa12.11□□□□□ -0.47
FANCA-216ENST00000564870 GRB10Q13322 594 aa12.11□□□□□ -0.47
FANCA-216ENST00000564870 ZMYM1Q5SVZ6 1142 aa12.11□□□□□ -0.47
FANCA-216ENST00000564870 SYDE2Q5VT97 1194 aa12.11□□□□□ -0.47
FANCA-216ENST00000564870 SLC30A10Q6XR72 485 aa12.11□□□□□ -0.47
FANCA-216ENST00000564870 MIER1Q8N108 512 aa12.11□□□□□ -0.47
FANCA-216ENST00000564870 DCAF4Q8WV16 495 aa12.11□□□□□ -0.47
FANCA-216ENST00000564870 COPS5Q92905 334 aa12.11□□□□□ -0.47
FANCA-216ENST00000564870 FSD1Q9BTV5 496 aa12.11□□□□□ -0.47
FANCA-216ENST00000564870 RANBP17Q9H2T7 1088 aaKnown RBP12.11□□□□□ -0.47
FANCA-216ENST00000564870 DCTPP1Q9H773 170 aa12.11□□□□□ -0.47
FANCA-216ENST00000564870 GPCPD1Q9NPB8 672 aa12.11□□□□□ -0.47
FANCA-216ENST00000564870 NOD1Q9Y239 953 aa12.11□□□□□ -0.47
FANCA-216ENST00000564870 SCN5AQ14524 2016 aa12.1□□□□□ -0.47
FANCA-216ENST00000564870 PITPNM1O00562 1244 aa12.1□□□□□ -0.47
FANCA-216ENST00000564870 HOXD11P31277 338 aaPredicted RBP12.1□□□□□ -0.47
FANCA-216ENST00000564870 BFSP2Q13515 415 aa12.1□□□□□ -0.47
FANCA-216ENST00000564870 PPP2R5BQ15173 497 aa12.1□□□□□ -0.47
FANCA-216ENST00000564870 TMEM31Q5JXX7 168 aa12.1□□□□□ -0.47
FANCA-216ENST00000564870 NFRKBQ6P4R8 1299 aa12.1□□□□□ -0.47
FANCA-216ENST00000564870 HCN4Q9Y3Q4 1203 aa12.1□□□□□ -0.47
FANCA-216ENST00000564870 TET1Q8NFU7 2136 aa12.1□□□□□ -0.47
FANCA-216ENST00000564870 FRMPD2Q68DX3 1309 aaPredicted RBP12.1□□□□□ -0.47
FANCA-216ENST00000564870 RAD50Q92878 1312 aa12.1□□□□□ -0.47
FANCA-216ENST00000564870 LOC102724159A0A0B4J2E5 919 aa12.09□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms