RNA–Protein interactions for RNA: ENST00000563941.5

MSLN-205, Transcript of mesothelin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene MSLN, Length 2,109 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSLN-205ENST00000563941 ANKRD40Q6AI12 368 aa22.39■■□□□ 1.17
MSLN-205ENST00000563941 REXO2Q9Y3B8 237 aaKnown RBP22.39■■□□□ 1.17
MSLN-205ENST00000563941 PPP1R2P41236 205 aa22.38■■□□□ 1.17
MSLN-205ENST00000563941 ZNF771Q7L3S4 317 aaPredicted RBP22.38■■□□□ 1.17
MSLN-205ENST00000563941 COA7Q96BR5 231 aa22.38■■□□□ 1.17
MSLN-205ENST00000563941 PKNOX2Q96KN3 472 aa22.38■■□□□ 1.17
MSLN-205ENST00000563941 CRAMP1Q96RY5 1269 aa22.38■■□□□ 1.17
MSLN-205ENST00000563941 KIF20AO95235 890 aa22.37■■□□□ 1.17
MSLN-205ENST00000563941 ADCY7P51828 1080 aa22.37■■□□□ 1.17
MSLN-205ENST00000563941 GABPAQ06546 454 aa22.37■■□□□ 1.17
MSLN-205ENST00000563941 DDR1Q08345 913 aa22.37■■□□□ 1.17
MSLN-205ENST00000563941 CALCRLQ16602 461 aa22.37■■□□□ 1.17
MSLN-205ENST00000563941 EEF2KMTQ96G04 330 aa22.37■■□□□ 1.17
MSLN-205ENST00000563941 CNOT6LQ96LI5 555 aaKnown RBP22.37■■□□□ 1.17
MSLN-205ENST00000563941 MTMR9Q96QG7 549 aa22.37■■□□□ 1.17
MSLN-205ENST00000563941 TBC1D8O95759 1140 aa22.37■■□□□ 1.17
MSLN-205ENST00000563941 AKR1B1P15121 316 aa22.37■■□□□ 1.17
MSLN-205ENST00000563941 TSR1Q2NL82 804 aaKnown RBP22.37■■□□□ 1.17
MSLN-205ENST00000563941 CNNM4Q6P4Q7 775 aa22.37■■□□□ 1.17
MSLN-205ENST00000563941 FAM114A1Q8IWE2 563 aa22.37■■□□□ 1.17
MSLN-205ENST00000563941 EIF6P56537 245 aaKnown RBP22.36■■□□□ 1.17
MSLN-205ENST00000563941 GRB10Q13322 594 aa22.36■■□□□ 1.17
MSLN-205ENST00000563941 WDR59Q6PJI9 974 aa22.36■■□□□ 1.17
MSLN-205ENST00000563941 DPP8Q6V1X1 898 aaPredicted RBP22.36■■□□□ 1.17
MSLN-205ENST00000563941 ARFGAP3Q9NP61 516 aa22.36■■□□□ 1.17
MSLN-205ENST00000563941 IGKV6D-41A0A0C4DH26 115 aa22.36■■□□□ 1.17
MSLN-205ENST00000563941 SNHG28P0DPA3 235 aa22.36■■□□□ 1.17
MSLN-205ENST00000563941 FXR2P51116 673 aaKnown RBP eCLIP22.36■■□□□ 1.17
MSLN-205ENST00000563941 CLEC10AQ8IUN9 316 aa22.36■■□□□ 1.17
MSLN-205ENST00000563941 KIAA0895Q8NCT3 520 aa22.36■■□□□ 1.17
MSLN-205ENST00000563941 TTYH3Q9C0H2 523 aa22.36■■□□□ 1.17
MSLN-205ENST00000563941 GPCPD1Q9NPB8 672 aa22.36■■□□□ 1.17
MSLN-205ENST00000563941 LRWD1Q9UFC0 647 aa22.36■■□□□ 1.17
MSLN-205ENST00000563941 RIMBP2O15034 1052 aa22.35■■□□□ 1.17
MSLN-205ENST00000563941 SLC37A4O43826 429 aa22.35■■□□□ 1.17
MSLN-205ENST00000563941 SASH3O75995 380 aa22.35■■□□□ 1.17
MSLN-205ENST00000563941 TDP2O95551 362 aa22.35■■□□□ 1.17
MSLN-205ENST00000563941 MTIF2P46199 727 aaKnown RBP22.35■■□□□ 1.17
MSLN-205ENST00000563941 COBLL1Q53SF7 1204 aa22.35■■□□□ 1.17
MSLN-205ENST00000563941 SV2BQ7L1I2 683 aa22.35■■□□□ 1.17
MSLN-205ENST00000563941 HPS3Q969F9 1004 aa22.35■■□□□ 1.17
MSLN-205ENST00000563941 NUP58Q9BVL2 599 aa22.35■■□□□ 1.17
MSLN-205ENST00000563941 DDX4Q9NQI0 724 aaKnown RBP22.35■■□□□ 1.17
MSLN-205ENST00000563941 EP400Q96L91 3159 aa22.35■■□□□ 1.17
MSLN-205ENST00000563941 F8W031 263 aaPredicted RBP22.34■■□□□ 1.17
MSLN-205ENST00000563941 POLRMTO00411 1230 aaKnown RBP22.34■■□□□ 1.17
MSLN-205ENST00000563941 PPEF1O14829 653 aaPredicted RBP22.34■■□□□ 1.17
MSLN-205ENST00000563941 TRIM21P19474 475 aaKnown RBP22.34■■□□□ 1.17
MSLN-205ENST00000563941 TBC1D8BQ0IIM8 1120 aa22.34■■□□□ 1.17
MSLN-205ENST00000563941 TMEM266Q2M3C6 531 aa22.34■■□□□ 1.17
MSLN-205ENST00000563941 PNMA5Q96PV4 448 aa22.34■■□□□ 1.17
MSLN-205ENST00000563941 BLOC1S4Q9NUP1 217 aa22.34■■□□□ 1.17
MSLN-205ENST00000563941 TRIM10Q9UDY6 481 aa22.34■■□□□ 1.17
MSLN-205ENST00000563941 STK17AQ9UEE5 414 aa22.34■■□□□ 1.17
MSLN-205ENST00000563941 GUCA1BQ9UMX6 200 aa22.34■■□□□ 1.17
MSLN-205ENST00000563941 EDIL3O43854 480 aa22.34■■□□□ 1.17
MSLN-205ENST00000563941 KLK7P49862 253 aa22.34■■□□□ 1.17
MSLN-205ENST00000563941 MEA1Q16626 185 aa22.34■■□□□ 1.17
MSLN-205ENST00000563941 RETREG2Q8NC44 543 aa22.34■■□□□ 1.17
MSLN-205ENST00000563941 HAUS4Q9H6D7 363 aa22.34■■□□□ 1.17
MSLN-205ENST00000563941 ANKZF1Q9H8Y5 726 aa22.34■■□□□ 1.17
MSLN-205ENST00000563941 AGPAT5Q9NUQ2 364 aa22.34■■□□□ 1.17
MSLN-205ENST00000563941 QSER1Q2KHR3 1735 aa22.33■■□□□ 1.17
MSLN-205ENST00000563941 CCDC151A5D8V7 595 aa22.33■■□□□ 1.17
MSLN-205ENST00000563941 RASSF10A6NK89 507 aa22.33■■□□□ 1.17
MSLN-205ENST00000563941 TFRCP02786 760 aaKnown RBP22.33■■□□□ 1.17
MSLN-205ENST00000563941 HERVK_113P62684 666 aa22.33■■□□□ 1.17
MSLN-205ENST00000563941 MCM6Q14566 821 aa22.33■■□□□ 1.17
MSLN-205ENST00000563941 BRD3Q15059 726 aa22.33■■□□□ 1.17
MSLN-205ENST00000563941 WHAMMP3Q1A5X7 153 aa22.33■■□□□ 1.17
MSLN-205ENST00000563941 MIIPQ5JXC2 388 aa22.33■■□□□ 1.17
MSLN-205ENST00000563941 SP8Q8IXZ3 490 aa22.33■■□□□ 1.17
MSLN-205ENST00000563941 NOC4LQ9BVI4 516 aaKnown RBP22.33■■□□□ 1.17
MSLN-205ENST00000563941 COA1Q9GZY4 146 aa22.33■■□□□ 1.17
MSLN-205ENST00000563941 SLC39A2Q9NP94 309 aa22.33■■□□□ 1.17
MSLN-205ENST00000563941 KLRG2A4D1S0 409 aaPredicted RBP22.33■■□□□ 1.16
MSLN-205ENST00000563941 TTLL1O95922 423 aa22.33■■□□□ 1.16
MSLN-205ENST00000563941 TMC4Q7Z404 712 aa22.33■■□□□ 1.16
MSLN-205ENST00000563941 LARP4BQ92615 738 aaKnown RBP22.33■■□□□ 1.16
MSLN-205ENST00000563941 CDK5RAP3Q96JB5 506 aa22.33■■□□□ 1.16
MSLN-205ENST00000563941 SEMA6BQ9H3T3 888 aa22.33■■□□□ 1.16
MSLN-205ENST00000563941 SUGT1Q9Y2Z0 365 aa22.33■■□□□ 1.16
MSLN-205ENST00000563941 MYMKA6NI61 221 aa22.32■■□□□ 1.16
MSLN-205ENST00000563941 POTEB2H3BUK9 544 aa22.32■■□□□ 1.16
MSLN-205ENST00000563941 TUBB4BP68371 445 aa22.32■■□□□ 1.16
MSLN-205ENST00000563941 AMPD2Q01433 879 aa22.32■■□□□ 1.16
MSLN-205ENST00000563941 ZNF543Q08ER8 600 aa22.32■■□□□ 1.16
MSLN-205ENST00000563941 ZSCAN29Q8IWY8 852 aaPredicted RBP22.32■■□□□ 1.16
MSLN-205ENST00000563941 CERS5Q8N5B7 392 aa22.32■■□□□ 1.16
MSLN-205ENST00000563941 RAB34Q9BZG1 259 aa22.32■■□□□ 1.16
MSLN-205ENST00000563941 JMJD4Q9H9V9 463 aa22.32■■□□□ 1.16
MSLN-205ENST00000563941 SERPINB13Q9UIV8 391 aa22.32■■□□□ 1.16
MSLN-205ENST00000563941 POTEMA6NI47 508 aa22.31■■□□□ 1.16
MSLN-205ENST00000563941 TNNI2P48788 182 aa22.31■■□□□ 1.16
MSLN-205ENST00000563941 ZBED6P86452 979 aa22.31■■□□□ 1.16
MSLN-205ENST00000563941 PPP1R18Q6NYC8 613 aa22.31■■□□□ 1.16
MSLN-205ENST00000563941 UNC13DQ70J99 1090 aa22.31■■□□□ 1.16
MSLN-205ENST00000563941 ADGRF4Q8IZF3 695 aa22.31■■□□□ 1.16
MSLN-205ENST00000563941 MSANTD4Q8NCY6 345 aa22.31■■□□□ 1.16
MSLN-205ENST00000563941 PCMTD1Q96MG8 357 aaPredicted RBP22.31■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms