RNA–Protein interactions for RNA: ENST00000563290.5

SCAPER-207, Transcript of S-phase cyclin A associated protein in the ER, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SCAPER, Length 5,028 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAPER-207ENST00000563290 TBX2Q13207 712 aaPredicted RBP6.62□□□□□ -1.35
SCAPER-207ENST00000563290 TDRD3Q9H7E2 651 aaKnown RBP6.62□□□□□ -1.35
SCAPER-207ENST00000563290 POLR3EQ9NVU0 708 aa6.62□□□□□ -1.35
SCAPER-207ENST00000563290 SERTAD1Q9UHV2 236 aa6.62□□□□□ -1.35
SCAPER-207ENST00000563290 SLIT3O75094 1523 aa6.62□□□□□ -1.35
SCAPER-207ENST00000563290 ANKRD62A6NC57 917 aa6.62□□□□□ -1.35
SCAPER-207ENST00000563290 ORC4O43929 436 aa6.62□□□□□ -1.35
SCAPER-207ENST00000563290 MMP1P03956 469 aa6.62□□□□□ -1.35
SCAPER-207ENST00000563290 ATP1A3P13637 1013 aa6.62□□□□□ -1.35
SCAPER-207ENST00000563290 CYLC1P35663 651 aaPredicted RBP6.62□□□□□ -1.35
SCAPER-207ENST00000563290 STRIP1Q5VSL9 837 aa6.62□□□□□ -1.35
SCAPER-207ENST00000563290 KCNV1Q6PIU1 500 aa6.62□□□□□ -1.35
SCAPER-207ENST00000563290 CYB5R4Q7L1T6 521 aa6.62□□□□□ -1.35
SCAPER-207ENST00000563290 ILDR1Q86SU0 546 aaPredicted RBP6.62□□□□□ -1.35
SCAPER-207ENST00000563290 SLFN12Q8IYM2 578 aa6.62□□□□□ -1.35
SCAPER-207ENST00000563290 TBC1D5Q92609 795 aa6.62□□□□□ -1.35
SCAPER-207ENST00000563290 ZNF277Q9NRM2 450 aaPredicted RBP6.62□□□□□ -1.35
SCAPER-207ENST00000563290 KDM3AQ9Y4C1 1321 aa6.62□□□□□ -1.35
SCAPER-207ENST00000563290 ADAMTSL3P82987 1691 aa6.62□□□□□ -1.35
SCAPER-207ENST00000563290 TRAF5O00463 557 aa6.62□□□□□ -1.35
SCAPER-207ENST00000563290 LAD1O00515 517 aa6.62□□□□□ -1.35
SCAPER-207ENST00000563290 PPP6R2O75170 966 aa6.62□□□□□ -1.35
SCAPER-207ENST00000563290 LONP1P36776 959 aaKnown RBP6.62□□□□□ -1.35
SCAPER-207ENST00000563290 SMTNP53814 917 aa6.62□□□□□ -1.35
SCAPER-207ENST00000563290 CASP7P55210 303 aa6.62□□□□□ -1.35
SCAPER-207ENST00000563290 PTGDRQ13258 359 aa6.62□□□□□ -1.35
SCAPER-207ENST00000563290 USP17L2Q6R6M4 530 aa6.62□□□□□ -1.35
SCAPER-207ENST00000563290 CCDC102AQ96A19 550 aa6.62□□□□□ -1.35
SCAPER-207ENST00000563290 BAG1Q99933 345 aaPredicted RBP6.62□□□□□ -1.35
SCAPER-207ENST00000563290 TACO1Q9BSH4 297 aaKnown RBP6.62□□□□□ -1.35
SCAPER-207ENST00000563290 MMRN2Q9H8L6 949 aa6.62□□□□□ -1.35
SCAPER-207ENST00000563290 CCPG1Q9ULG6 757 aa6.62□□□□□ -1.35
SCAPER-207ENST00000563290 PCDHA12Q9UN75 941 aa6.62□□□□□ -1.35
SCAPER-207ENST00000563290 CLIC4Q9Y696 253 aa6.62□□□□□ -1.35
SCAPER-207ENST00000563290 STX10O60499 249 aa6.62□□□□□ -1.35
SCAPER-207ENST00000563290 GAS7O60861 476 aa6.62□□□□□ -1.35
SCAPER-207ENST00000563290 ASNSP08243 561 aa6.62□□□□□ -1.35
SCAPER-207ENST00000563290 AARSP49588 968 aaKnown RBP eCLIP6.62□□□□□ -1.35
SCAPER-207ENST00000563290 EZH2Q15910 746 aaKnown RBP6.62□□□□□ -1.35
SCAPER-207ENST00000563290 KCTD1Q719H9 257 aa6.62□□□□□ -1.35
SCAPER-207ENST00000563290 COL23A1Q86Y22 540 aaPredicted RBP6.62□□□□□ -1.35
SCAPER-207ENST00000563290 SPICE1Q8N0Z3 855 aa6.62□□□□□ -1.35
SCAPER-207ENST00000563290 CEP120Q8N960 986 aa6.62□□□□□ -1.35
SCAPER-207ENST00000563290 AFAP1L1Q8TED9 768 aa6.62□□□□□ -1.35
SCAPER-207ENST00000563290 SMCR8Q8TEV9 937 aaPredicted RBP6.62□□□□□ -1.35
SCAPER-207ENST00000563290 PIGSQ96S52 555 aa6.62□□□□□ -1.35
SCAPER-207ENST00000563290 SUGCTQ9HAC7 445 aa6.62□□□□□ -1.35
SCAPER-207ENST00000563290 SHOX2O60902 331 aaPredicted RBP6.61□□□□□ -1.35
SCAPER-207ENST00000563290 UBXN1Q04323 297 aa6.61□□□□□ -1.35
SCAPER-207ENST00000563290 TUBB2AQ13885 445 aa6.61□□□□□ -1.35
SCAPER-207ENST00000563290 GNPTABQ3T906 1256 aa6.61□□□□□ -1.35
SCAPER-207ENST00000563290 HERC4Q5GLZ8 1057 aaPredicted RBP6.61□□□□□ -1.35
SCAPER-207ENST00000563290 TMTC3Q6ZXV5 915 aa6.61□□□□□ -1.35
SCAPER-207ENST00000563290 FAM160B2Q86V87 743 aa6.61□□□□□ -1.35
SCAPER-207ENST00000563290 TUBB2BQ9BVA1 445 aa6.61□□□□□ -1.35
SCAPER-207ENST00000563290 GBP3Q9H0R5 595 aa6.61□□□□□ -1.35
SCAPER-207ENST00000563290 SPON1Q9HCB6 807 aa6.61□□□□□ -1.35
SCAPER-207ENST00000563290 A0A0G2JLW4 131 aa6.61□□□□□ -1.35
SCAPER-207ENST00000563290 CCDC189A1A4V9 331 aa6.61□□□□□ -1.35
SCAPER-207ENST00000563290 PHACTR2O75167 634 aa6.61□□□□□ -1.35
SCAPER-207ENST00000563290 PRPF6O94906 941 aaKnown RBP6.61□□□□□ -1.35
SCAPER-207ENST00000563290 SYF2O95926 243 aaKnown RBP6.61□□□□□ -1.35
SCAPER-207ENST00000563290 CACNB3P54284 484 aa6.61□□□□□ -1.35
SCAPER-207ENST00000563290 PAK1Q13153 545 aa6.61□□□□□ -1.35
SCAPER-207ENST00000563290 PRR16Q569H4 304 aa6.61□□□□□ -1.35
SCAPER-207ENST00000563290 BRDTQ58F21 947 aaPredicted RBP6.61□□□□□ -1.35
SCAPER-207ENST00000563290 SYDE2Q5VT97 1194 aa6.61□□□□□ -1.35
SCAPER-207ENST00000563290 GADL1Q6ZQY3 521 aa6.61□□□□□ -1.35
SCAPER-207ENST00000563290 KRT26Q7Z3Y9 468 aa6.61□□□□□ -1.35
SCAPER-207ENST00000563290 TMEM47Q9BQJ4 181 aa6.61□□□□□ -1.35
SCAPER-207ENST00000563290 VIPAS39Q9H9C1 493 aa6.61□□□□□ -1.35
SCAPER-207ENST00000563290 DDX25Q9UHL0 483 aaKnown RBP6.61□□□□□ -1.35
SCAPER-207ENST00000563290 ZNRF3Q9ULT6 936 aa6.61□□□□□ -1.35
SCAPER-207ENST00000563290 CTNND2Q9UQB3 1225 aa6.61□□□□□ -1.35
SCAPER-207ENST00000563290 NFAT5O94916 1531 aa6.61□□□□□ -1.35
SCAPER-207ENST00000563290 LRRIQ3A6PVS8 624 aaPredicted RBP6.61□□□□□ -1.35
SCAPER-207ENST00000563290 RNF40O75150 1001 aa6.61□□□□□ -1.35
SCAPER-207ENST00000563290 GCFC2P16383 781 aaKnown RBP6.61□□□□□ -1.35
SCAPER-207ENST00000563290 SBK1Q52WX2 424 aa6.61□□□□□ -1.35
SCAPER-207ENST00000563290 C12orf60Q5U649 245 aa6.61□□□□□ -1.35
SCAPER-207ENST00000563290 ARHGEF16Q5VV41 709 aa6.61□□□□□ -1.35
SCAPER-207ENST00000563290 IFT74Q96LB3 600 aa6.61□□□□□ -1.35
SCAPER-207ENST00000563290 ALS2CR12Q96Q35 445 aa6.61□□□□□ -1.35
SCAPER-207ENST00000563290 LY9Q9HBG7 655 aa6.61□□□□□ -1.35
SCAPER-207ENST00000563290 A1CFQ9NQ94 594 aaKnown RBP6.61□□□□□ -1.35
SCAPER-207ENST00000563290 INCENPQ9NQS7 918 aa6.61□□□□□ -1.35
SCAPER-207ENST00000563290 SH3GLB2Q9NR46 395 aa6.61□□□□□ -1.35
SCAPER-207ENST00000563290 CDC23Q9UJX2 597 aa6.61□□□□□ -1.35
SCAPER-207ENST00000563290 STK36Q9NRP7 1315 aa6.61□□□□□ -1.35
SCAPER-207ENST00000563290 PNMA6FA0A0J9YX94 578 aa6.61□□□□□ -1.35
SCAPER-207ENST00000563290 DDX39AO00148 427 aaKnown RBP6.61□□□□□ -1.35
SCAPER-207ENST00000563290 NOP56O00567 594 aaKnown RBP6.61□□□□□ -1.35
SCAPER-207ENST00000563290 SLC16A2P36021 539 aa6.61□□□□□ -1.35
SCAPER-207ENST00000563290 TECP42680 631 aa6.61□□□□□ -1.35
SCAPER-207ENST00000563290 EXOSC10Q01780 885 aaKnown RBP6.61□□□□□ -1.35
SCAPER-207ENST00000563290 MIGA2Q7L4E1 593 aa6.61□□□□□ -1.35
SCAPER-207ENST00000563290 SGMS1Q86VZ5 419 aa6.61□□□□□ -1.35
SCAPER-207ENST00000563290 ENAHQ8N8S7 591 aaPredicted RBP6.61□□□□□ -1.35
SCAPER-207ENST00000563290 EHBP1Q8NDI1 1231 aa6.61□□□□□ -1.35
SCAPER-207ENST00000563290 NEDD1Q8NHV4 660 aa6.61□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms