RNA–Protein interactions for RNA: ENST00000562836.5

CDH1-205, Transcript of cadherin 1, humanhuman

TSL 1 (best)

Gene CDH1, Length 2,759 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-205ENST00000562836 ZNF536O15090 1300 aa10.33□□□□□ -0.76
CDH1-205ENST00000562836 F8W031 263 aaPredicted RBP10.32□□□□□ -0.76
CDH1-205ENST00000562836 NCK2O43639 380 aa10.32□□□□□ -0.76
CDH1-205ENST00000562836 NPTXRO95502 500 aa10.32□□□□□ -0.76
CDH1-205ENST00000562836 WEE1P30291 646 aa10.32□□□□□ -0.76
CDH1-205ENST00000562836 KIF5BP33176 963 aa10.32□□□□□ -0.76
CDH1-205ENST00000562836 IRAK1P51617 712 aa10.32□□□□□ -0.76
CDH1-205ENST00000562836 SNW1Q13573 536 aaKnown RBP10.32□□□□□ -0.76
CDH1-205ENST00000562836 SAFB2Q14151 953 aaKnown RBP eCLIP10.32□□□□□ -0.76
CDH1-205ENST00000562836 PLCB4Q15147 1175 aa10.32□□□□□ -0.76
CDH1-205ENST00000562836 MAP3K11Q16584 847 aa10.32□□□□□ -0.76
CDH1-205ENST00000562836 ANKDD1AQ495B1 522 aa10.32□□□□□ -0.76
CDH1-205ENST00000562836 B4GALNT4Q76KP1 1039 aa10.32□□□□□ -0.76
CDH1-205ENST00000562836 SCUBE1Q8IWY4 988 aa10.32□□□□□ -0.76
CDH1-205ENST00000562836 USP38Q8NB14 1042 aa10.32□□□□□ -0.76
CDH1-205ENST00000562836 NSUN7Q8NE18 718 aaKnown RBP10.32□□□□□ -0.76
CDH1-205ENST00000562836 CASP10Q92851 521 aa10.32□□□□□ -0.76
CDH1-205ENST00000562836 ACAP3Q96P50 834 aa10.32□□□□□ -0.76
CDH1-205ENST00000562836 UBN1Q9NPG3 1134 aa10.32□□□□□ -0.76
CDH1-205ENST00000562836 HMGXB4Q9UGU5 601 aa10.32□□□□□ -0.76
CDH1-205ENST00000562836 PCDHGB3Q9Y5G1 929 aa10.32□□□□□ -0.76
CDH1-205ENST00000562836 KDM5CP41229 1560 aa10.32□□□□□ -0.76
CDH1-205ENST00000562836 GOLGA8JA6NMD2 632 aa10.32□□□□□ -0.76
CDH1-205ENST00000562836 GOLGA8TH3BQL2 631 aa10.32□□□□□ -0.76
CDH1-205ENST00000562836 ZBED4O75132 1171 aa10.32□□□□□ -0.76
CDH1-205ENST00000562836 LCA5LO95447 670 aa10.32□□□□□ -0.76
CDH1-205ENST00000562836 GOLGA8HP0CJ92 632 aa10.32□□□□□ -0.76
CDH1-205ENST00000562836 CCT6AP40227 531 aaKnown RBP10.32□□□□□ -0.76
CDH1-205ENST00000562836 HDGFP51858 240 aaKnown RBP10.32□□□□□ -0.76
CDH1-205ENST00000562836 CD83Q01151 205 aa10.32□□□□□ -0.76
CDH1-205ENST00000562836 KIAA1614Q5VZ46 1190 aa10.32□□□□□ -0.76
CDH1-205ENST00000562836 ZNF600Q6ZNG1 722 aa10.32□□□□□ -0.76
CDH1-205ENST00000562836 RBM42Q9BTD8 480 aaKnown RBP10.32□□□□□ -0.76
CDH1-205ENST00000562836 DMAP1Q9NPF5 467 aaPredicted RBP10.32□□□□□ -0.76
CDH1-205ENST00000562836 ZC3H7BQ9UGR2 993 aaKnown RBP10.32□□□□□ -0.76
CDH1-205ENST00000562836 RPAP1Q9BWH6 1393 aaPredicted RBP10.32□□□□□ -0.76
CDH1-205ENST00000562836 BHMG1C9JSJ3 638 aaPredicted RBP10.31□□□□□ -0.76
CDH1-205ENST00000562836 OPLAHO14841 1288 aa10.31□□□□□ -0.76
CDH1-205ENST00000562836 PRMT3O60678 531 aa10.31□□□□□ -0.76
CDH1-205ENST00000562836 ALDH2P05091 517 aa10.31□□□□□ -0.76
CDH1-205ENST00000562836 TUBP50607 506 aa10.31□□□□□ -0.76
CDH1-205ENST00000562836 DPYSQ14117 519 aa10.31□□□□□ -0.76
CDH1-205ENST00000562836 COG2Q14746 738 aa10.31□□□□□ -0.76
CDH1-205ENST00000562836 C15orf59Q2T9L4 293 aaPredicted RBP10.31□□□□□ -0.76
CDH1-205ENST00000562836 CHPFQ8IZ52 775 aa10.31□□□□□ -0.76
CDH1-205ENST00000562836 CCAR2Q8N163 923 aaKnown RBP10.31□□□□□ -0.76
CDH1-205ENST00000562836 SKA1Q96BD8 255 aa10.31□□□□□ -0.76
CDH1-205ENST00000562836 MTMR9Q96QG7 549 aa10.31□□□□□ -0.76
CDH1-205ENST00000562836 GBA3Q9H227 469 aa10.31□□□□□ -0.76
CDH1-205ENST00000562836 PIF1Q9H611 641 aa10.31□□□□□ -0.76
CDH1-205ENST00000562836 KAT14Q9H8E8 782 aa10.31□□□□□ -0.76
CDH1-205ENST00000562836 CIDEBQ9UHD4 219 aa10.31□□□□□ -0.76
CDH1-205ENST00000562836 ZNF148Q9UQR1 794 aa10.31□□□□□ -0.76
CDH1-205ENST00000562836 ATXN2Q99700 1313 aaKnown RBP10.31□□□□□ -0.76
CDH1-205ENST00000562836 CCDC144AA2RUR9 1427 aa10.31□□□□□ -0.76
CDH1-205ENST00000562836 TNFRSF10AO00220 468 aa10.31□□□□□ -0.76
CDH1-205ENST00000562836 ABCC5O15440 1437 aa10.31□□□□□ -0.76
CDH1-205ENST00000562836 ZMYND10O75800 440 aa10.31□□□□□ -0.76
CDH1-205ENST00000562836 GLI1P08151 1106 aa10.31□□□□□ -0.76
CDH1-205ENST00000562836 CDK4P11802 303 aa10.31□□□□□ -0.76
CDH1-205ENST00000562836 CD9P21926 228 aa10.31□□□□□ -0.76
CDH1-205ENST00000562836 TKTP29401 623 aaKnown RBP10.31□□□□□ -0.76
CDH1-205ENST00000562836 GPC3P51654 580 aa10.31□□□□□ -0.76
CDH1-205ENST00000562836 ADAM9Q13443 819 aa10.31□□□□□ -0.76
CDH1-205ENST00000562836 TUBA3CQ13748 450 aa10.31□□□□□ -0.76
CDH1-205ENST00000562836 ATAD2Q6PL18 1390 aa10.31□□□□□ -0.76
CDH1-205ENST00000562836 AADATQ8N5Z0 425 aa10.31□□□□□ -0.76
CDH1-205ENST00000562836 CDC26Q8NHZ8 85 aa10.31□□□□□ -0.76
CDH1-205ENST00000562836 HERVK_113Q902F9 699 aa10.31□□□□□ -0.76
CDH1-205ENST00000562836 KIF15Q9NS87 1388 aa10.31□□□□□ -0.76
CDH1-205ENST00000562836 HAUS2Q9NVX0 235 aa10.31□□□□□ -0.76
CDH1-205ENST00000562836 BAIAP2L1Q9UHR4 511 aa10.31□□□□□ -0.76
CDH1-205ENST00000562836 GNPATO15228 680 aa10.31□□□□□ -0.76
CDH1-205ENST00000562836 MAP3K7O43318 606 aa10.31□□□□□ -0.76
CDH1-205ENST00000562836 RNF40O75150 1001 aa10.31□□□□□ -0.76
CDH1-205ENST00000562836 KCNA6P17658 529 aa10.31□□□□□ -0.76
CDH1-205ENST00000562836 TBL3Q12788 808 aaKnown RBP10.31□□□□□ -0.76
CDH1-205ENST00000562836 NFX1Q12986 1120 aaKnown RBP10.31□□□□□ -0.76
CDH1-205ENST00000562836 MTX1Q13505 466 aa10.31□□□□□ -0.76
CDH1-205ENST00000562836 PDXDC2PQ6P474 469 aa10.31□□□□□ -0.76
CDH1-205ENST00000562836 CCDC144CPQ8IYA2 1237 aa10.31□□□□□ -0.76
CDH1-205ENST00000562836 RUNDC1Q96C34 613 aa10.31□□□□□ -0.76
CDH1-205ENST00000562836 NAF1Q96HR8 494 aaKnown RBP10.31□□□□□ -0.76
CDH1-205ENST00000562836 FGD4Q96M96 766 aa10.31□□□□□ -0.76
CDH1-205ENST00000562836 NOD2Q9HC29 1040 aa10.31□□□□□ -0.76
CDH1-205ENST00000562836 EURLQ9NYK6 297 aa10.31□□□□□ -0.76
CDH1-205ENST00000562836 ZBTB21Q9ULJ3 1066 aa10.31□□□□□ -0.76
CDH1-205ENST00000562836 TRIM64A6NGJ6 449 aa10.3□□□□□ -0.76
CDH1-205ENST00000562836 TRIM64BA6NI03 449 aa10.3□□□□□ -0.76
CDH1-205ENST00000562836 XPOTO43592 962 aaKnown RBP10.3□□□□□ -0.76
CDH1-205ENST00000562836 KPNA6O60684 536 aa10.3□□□□□ -0.76
CDH1-205ENST00000562836 DGKIO75912 1065 aa10.3□□□□□ -0.76
CDH1-205ENST00000562836 LUC7L3O95232 432 aaKnown RBP10.3□□□□□ -0.76
CDH1-205ENST00000562836 CNBD1Q8NA66 436 aa10.3□□□□□ -0.76
CDH1-205ENST00000562836 OSCP1Q8WVF1 389 aa10.3□□□□□ -0.76
CDH1-205ENST00000562836 ARHGEF2Q92974 986 aaKnown RBP10.3□□□□□ -0.76
CDH1-205ENST00000562836 CCDC42Q96M95 316 aa10.3□□□□□ -0.76
CDH1-205ENST00000562836 XAB2Q9HCS7 855 aaKnown RBP10.3□□□□□ -0.76
CDH1-205ENST00000562836 STK32BQ9NY57 414 aa10.3□□□□□ -0.76
CDH1-205ENST00000562836 RASAL2Q9UJF2 1139 aa10.3□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms