RNA–Protein interactions for RNA: ENST00000562601.5

CDH13-206, Transcript of cadherin 13, humanhuman

TSL 4

Gene CDH13, Length 545 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13-206ENST00000562601 MINDY4BA8MYZ0 360 aa6.94□□□□□ -1.3
CDH13-206ENST00000562601 MPHOSPH10O00566 681 aaKnown RBP6.94□□□□□ -1.3
CDH13-206ENST00000562601 GPAA1O43292 621 aa6.94□□□□□ -1.3
CDH13-206ENST00000562601 GH2P01242 217 aa6.94□□□□□ -1.3
CDH13-206ENST00000562601 ZFYP08048 801 aaPredicted RBP6.94□□□□□ -1.3
CDH13-206ENST00000562601 SHMT1P34896 483 aa6.94□□□□□ -1.3
CDH13-206ENST00000562601 SPP2Q13103 211 aa6.94□□□□□ -1.3
CDH13-206ENST00000562601 NMIQ13287 307 aaPredicted RBP6.94□□□□□ -1.3
CDH13-206ENST00000562601 MOGSQ13724 837 aa6.94□□□□□ -1.3
CDH13-206ENST00000562601 RAB3GAP1Q15042 981 aa6.94□□□□□ -1.3
CDH13-206ENST00000562601 TAF1CQ15572 869 aaPredicted RBP6.94□□□□□ -1.3
CDH13-206ENST00000562601 CERKLQ49MI3 558 aaPredicted RBP6.94□□□□□ -1.3
CDH13-206ENST00000562601 ZMYM1Q5SVZ6 1142 aa6.94□□□□□ -1.3
CDH13-206ENST00000562601 OTUD7BQ6GQQ9 843 aa6.94□□□□□ -1.3
CDH13-206ENST00000562601 CTR9Q6PD62 1173 aa6.94□□□□□ -1.3
CDH13-206ENST00000562601 METTL16Q86W50 562 aaKnown RBP6.94□□□□□ -1.3
CDH13-206ENST00000562601 ZNF295-AS1Q8N0V1 137 aa6.94□□□□□ -1.3
CDH13-206ENST00000562601 ZNF296Q8WUU4 475 aaPredicted RBP6.94□□□□□ -1.3
CDH13-206ENST00000562601 APPBP2Q92624 585 aa6.94□□□□□ -1.3
CDH13-206ENST00000562601 EVI5LQ96CN4 794 aa6.94□□□□□ -1.3
CDH13-206ENST00000562601 FAM227BQ96M60 508 aa6.94□□□□□ -1.3
CDH13-206ENST00000562601 TSPAN10Q9H1Z9 355 aaPredicted RBP6.94□□□□□ -1.3
CDH13-206ENST00000562601 CRISPLD1Q9H336 500 aa6.94□□□□□ -1.3
CDH13-206ENST00000562601 ATP8A2Q9NTI2 1148 aa6.94□□□□□ -1.3
CDH13-206ENST00000562601 CUEDC1Q9NWM3 386 aaPredicted RBP6.94□□□□□ -1.3
CDH13-206ENST00000562601 SERPINB13Q9UIV8 391 aa6.94□□□□□ -1.3
CDH13-206ENST00000562601 ZNF232Q9UNY5 417 aa6.94□□□□□ -1.3
CDH13-206ENST00000562601 PHF24Q9UPV7 400 aa6.94□□□□□ -1.3
CDH13-206ENST00000562601 KCNH4Q9UQ05 1017 aa6.94□□□□□ -1.3
CDH13-206ENST00000562601 GPC6Q9Y625 555 aaPredicted RBP6.94□□□□□ -1.3
CDH13-206ENST00000562601 ZSWIM8A7E2V4 1837 aa6.94□□□□□ -1.3
CDH13-206ENST00000562601 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP6.93□□□□□ -1.3
CDH13-206ENST00000562601 A0A0D9SFI3 127 aa6.93□□□□□ -1.3
CDH13-206ENST00000562601 A0A0G2JLL6 359 aaPredicted RBP6.93□□□□□ -1.3
CDH13-206ENST00000562601 PATL2C9JE40 543 aaKnown RBP6.93□□□□□ -1.3
CDH13-206ENST00000562601 GPR25O00155 361 aa6.93□□□□□ -1.3
CDH13-206ENST00000562601 PDHXO00330 501 aa6.93□□□□□ -1.3
CDH13-206ENST00000562601 CXCL11O14625 94 aa6.93□□□□□ -1.3
CDH13-206ENST00000562601 ATG7O95352 703 aa6.93□□□□□ -1.3
CDH13-206ENST00000562601 NOS2P35228 1153 aa6.93□□□□□ -1.3
CDH13-206ENST00000562601 HMGCS2P54868 508 aa6.93□□□□□ -1.3
CDH13-206ENST00000562601 ZYXQ15942 572 aaKnown RBP6.93□□□□□ -1.3
CDH13-206ENST00000562601 DBN1Q16643 649 aa6.93□□□□□ -1.3
CDH13-206ENST00000562601 ABCB5Q2M3G0 1257 aa6.93□□□□□ -1.3
CDH13-206ENST00000562601 TREML2Q5T2D2 321 aa6.93□□□□□ -1.3
CDH13-206ENST00000562601 C12orf60Q5U649 245 aa6.93□□□□□ -1.3
CDH13-206ENST00000562601 GPAT2Q6NUI2 795 aa6.93□□□□□ -1.3
CDH13-206ENST00000562601 TATDN1Q6P1N9 297 aa6.93□□□□□ -1.3
CDH13-206ENST00000562601 FIGNL1Q6PIW4 674 aa6.93□□□□□ -1.3
CDH13-206ENST00000562601 PRRT2Q7Z6L0 340 aaPredicted RBP6.93□□□□□ -1.3
CDH13-206ENST00000562601 IFNL3Q8IZI9 196 aa6.93□□□□□ -1.3
CDH13-206ENST00000562601 STAG2Q8N3U4 1231 aa6.93□□□□□ -1.3
CDH13-206ENST00000562601 ZNF280CQ8ND82 737 aa6.93□□□□□ -1.3
CDH13-206ENST00000562601 EHD4Q9H223 541 aa6.93□□□□□ -1.3
CDH13-206ENST00000562601 EPB41L4AQ9HCS5 686 aaPredicted RBP6.93□□□□□ -1.3
CDH13-206ENST00000562601 ZBTB21Q9ULJ3 1066 aa6.93□□□□□ -1.3
CDH13-206ENST00000562601 USP3Q9Y6I4 520 aa6.93□□□□□ -1.3
CDH13-206ENST00000562601 FKTNO75072 461 aa6.92□□□□□ -1.3
CDH13-206ENST00000562601 PRDM1O75626 825 aa6.92□□□□□ -1.3
CDH13-206ENST00000562601 ASNSP08243 561 aa6.92□□□□□ -1.3
CDH13-206ENST00000562601 CYP2C8P10632 490 aa6.92□□□□□ -1.3
CDH13-206ENST00000562601 AKR1B1P15121 316 aa6.92□□□□□ -1.3
CDH13-206ENST00000562601 SDSP20132 328 aa6.92□□□□□ -1.3
CDH13-206ENST00000562601 GUCY1A2P33402 732 aa6.92□□□□□ -1.3
CDH13-206ENST00000562601 TDO2P48775 406 aa6.92□□□□□ -1.3
CDH13-206ENST00000562601 CDK8P49336 464 aa6.92□□□□□ -1.3
CDH13-206ENST00000562601 CAP1Q01518 475 aa6.92□□□□□ -1.3
CDH13-206ENST00000562601 GABPAQ06546 454 aa6.92□□□□□ -1.3
CDH13-206ENST00000562601 SEPT2Q15019 361 aa6.92□□□□□ -1.3
CDH13-206ENST00000562601 SWI5Q1ZZU3 235 aa6.92□□□□□ -1.3
CDH13-206ENST00000562601 LRRFIP1Q32MZ4 808 aaKnown RBP6.92□□□□□ -1.3
CDH13-206ENST00000562601 ARSJQ5FYB0 599 aaPredicted RBP6.92□□□□□ -1.3
CDH13-206ENST00000562601 VPS53Q5VIR6 699 aa6.92□□□□□ -1.3
CDH13-206ENST00000562601 CWC27Q6UX04 472 aaKnown RBP6.92□□□□□ -1.3
CDH13-206ENST00000562601 ANKRD23Q86SG2 305 aa6.92□□□□□ -1.3
CDH13-206ENST00000562601 NLRP8Q86W28 1048 aa6.92□□□□□ -1.3
CDH13-206ENST00000562601 CLEC10AQ8IUN9 316 aa6.92□□□□□ -1.3
CDH13-206ENST00000562601 AMOTL1Q8IY63 956 aa6.92□□□□□ -1.3
CDH13-206ENST00000562601 CD99L2Q8TCZ2 262 aa6.92□□□□□ -1.3
CDH13-206ENST00000562601 ACER1Q8TDN7 264 aa6.92□□□□□ -1.3
CDH13-206ENST00000562601 COL25A1Q9BXS0 654 aaPredicted RBP6.92□□□□□ -1.3
CDH13-206ENST00000562601 MCOLN1Q9GZU1 580 aa6.92□□□□□ -1.3
CDH13-206ENST00000562601 RUBCNLQ9H714 662 aa6.92□□□□□ -1.3
CDH13-206ENST00000562601 AS3MTQ9HBK9 375 aa6.92□□□□□ -1.3
CDH13-206ENST00000562601 ZFYVE28Q9HCC9 887 aa6.92□□□□□ -1.3
CDH13-206ENST00000562601 CABP5Q9NP86 173 aa6.92□□□□□ -1.3
CDH13-206ENST00000562601 INCENPQ9NQS7 918 aa6.92□□□□□ -1.3
CDH13-206ENST00000562601 CPA4Q9UI42 421 aa6.92□□□□□ -1.3
CDH13-206ENST00000562601 LOC285556D6RIA3 1793 aa6.91□□□□□ -1.3
CDH13-206ENST00000562601 FOXP2O15409 715 aa6.91□□□□□ -1.3
CDH13-206ENST00000562601 PEX10O60683 326 aa6.91□□□□□ -1.3
CDH13-206ENST00000562601 NEFLP07196 543 aa6.91□□□□□ -1.3
CDH13-206ENST00000562601 GSPT1P15170 499 aaKnown RBP6.91□□□□□ -1.3
CDH13-206ENST00000562601 GNAT2P19087 354 aa6.91□□□□□ -1.3
CDH13-206ENST00000562601 ATP4AP20648 1035 aa6.91□□□□□ -1.3
CDH13-206ENST00000562601 IGFBP4P22692 258 aa6.91□□□□□ -1.3
CDH13-206ENST00000562601 MCMDC2Q4G0Z9 681 aa6.91□□□□□ -1.3
CDH13-206ENST00000562601 TBCELQ5QJ74 424 aa6.91□□□□□ -1.3
CDH13-206ENST00000562601 TTC22Q5TAA0 569 aa6.91□□□□□ -1.3
CDH13-206ENST00000562601 C1orf53Q5VUE5 145 aa6.91□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms