RNA–Protein interactions for RNA: ENST00000561978.1

PCAT1-202, prostate cancer associated transcript 1, humanhuman

TSL 1 (best) BASIC

Gene PCAT1, Length 1,992 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCAT1-202ENST00000561978 CCDC12Q8WUD4 166 aaPredicted RBP13.16□□□□□ -0.3
PCAT1-202ENST00000561978 CACTINQ8WUQ7 758 aaKnown RBP13.16□□□□□ -0.3
PCAT1-202ENST00000561978 ZNF592Q92610 1267 aa13.16□□□□□ -0.3
PCAT1-202ENST00000561978 ELP3Q9H9T3 547 aa13.16□□□□□ -0.3
PCAT1-202ENST00000561978 FRMD4AQ9P2Q2 1039 aaPredicted RBP13.16□□□□□ -0.3
PCAT1-202ENST00000561978 SERPINB13Q9UIV8 391 aa13.16□□□□□ -0.3
PCAT1-202ENST00000561978 POTEFA5A3E0 1075 aa13.16□□□□□ -0.3
PCAT1-202ENST00000561978 ACTN4O43707 911 aaKnown RBP13.16□□□□□ -0.3
PCAT1-202ENST00000561978 TOP1P11387 765 aaKnown RBP13.16□□□□□ -0.3
PCAT1-202ENST00000561978 MAP3K9P80192 1104 aa13.16□□□□□ -0.3
PCAT1-202ENST00000561978 CCDC144BQ3MJ40 725 aa13.16□□□□□ -0.3
PCAT1-202ENST00000561978 PIK3AP1Q6ZUJ8 805 aa13.16□□□□□ -0.3
PCAT1-202ENST00000561978 DAGLBQ8NCG7 672 aa13.16□□□□□ -0.3
PCAT1-202ENST00000561978 SPATA20Q8TB22 786 aa13.16□□□□□ -0.3
PCAT1-202ENST00000561978 CAPNS2Q96L46 248 aa13.16□□□□□ -0.3
PCAT1-202ENST00000561978 ZIC5Q96T25 663 aa13.16□□□□□ -0.3
PCAT1-202ENST00000561978 TRIM34Q9BYJ4 488 aa13.16□□□□□ -0.3
PCAT1-202ENST00000561978 IFNKQ9P0W0 207 aa13.16□□□□□ -0.3
PCAT1-202ENST00000561978 FAM205CA6NFA0 338 aa13.15□□□□□ -0.3
PCAT1-202ENST00000561978 TBC1D12O60347 775 aa13.15□□□□□ -0.3
PCAT1-202ENST00000561978 AOC2O75106 756 aa13.15□□□□□ -0.3
PCAT1-202ENST00000561978 FANCCQ00597 558 aa13.15□□□□□ -0.3
PCAT1-202ENST00000561978 MAP3K10Q02779 954 aa13.15□□□□□ -0.3
PCAT1-202ENST00000561978 MORC3Q14149 939 aa13.15□□□□□ -0.3
PCAT1-202ENST00000561978 RRP1BQ14684 758 aaKnown RBP13.15□□□□□ -0.3
PCAT1-202ENST00000561978 SHROOM1Q2M3G4 852 aaPredicted RBP13.15□□□□□ -0.3
PCAT1-202ENST00000561978 FILIP1Q7Z7B0 1213 aa13.15□□□□□ -0.3
PCAT1-202ENST00000561978 STAG2Q8N3U4 1231 aa13.15□□□□□ -0.3
PCAT1-202ENST00000561978 SLC44A5Q8NCS7 719 aa13.15□□□□□ -0.3
PCAT1-202ENST00000561978 CCDC150Q8NCX0 1101 aa13.15□□□□□ -0.3
PCAT1-202ENST00000561978 SLC10A4Q96EP9 437 aa13.15□□□□□ -0.3
PCAT1-202ENST00000561978 SPZ1Q9BXG8 430 aa13.15□□□□□ -0.3
PCAT1-202ENST00000561978 XPO4Q9C0E2 1151 aaKnown RBP13.15□□□□□ -0.3
PCAT1-202ENST00000561978 BARHL2Q9NY43 387 aa13.15□□□□□ -0.3
PCAT1-202ENST00000561978 HERC5Q9UII4 1024 aaKnown RBP13.15□□□□□ -0.3
PCAT1-202ENST00000561978 MAN1B1Q9UKM7 699 aa13.15□□□□□ -0.3
PCAT1-202ENST00000561978 CSADQ9Y600 493 aa13.15□□□□□ -0.3
PCAT1-202ENST00000561978 CENPFP49454 3210 aa13.15□□□□□ -0.3
PCAT1-202ENST00000561978 CCDC194A0A1B0GVG4 234 aa13.14□□□□□ -0.31
PCAT1-202ENST00000561978 KLRF2D3W0D1 207 aa13.14□□□□□ -0.31
PCAT1-202ENST00000561978 PARP1P09874 1014 aaKnown RBP13.14□□□□□ -0.31
PCAT1-202ENST00000561978 NOVP48745 357 aa13.14□□□□□ -0.31
PCAT1-202ENST00000561978 LRMPQ12912 555 aa13.14□□□□□ -0.31
PCAT1-202ENST00000561978 PDILTQ8N807 584 aa13.14□□□□□ -0.31
PCAT1-202ENST00000561978 IQUBQ8NA54 791 aa13.14□□□□□ -0.31
PCAT1-202ENST00000561978 SYMPKQ92797 1274 aaKnown RBP13.14□□□□□ -0.31
PCAT1-202ENST00000561978 OTUD5Q96G74 571 aa13.14□□□□□ -0.31
PCAT1-202ENST00000561978 HHIPL1Q96JK4 782 aa13.14□□□□□ -0.31
PCAT1-202ENST00000561978 ZNF112Q9UJU3 913 aa13.14□□□□□ -0.31
PCAT1-202ENST00000561978 SNCAIPQ9Y6H5 919 aa13.14□□□□□ -0.31
PCAT1-202ENST00000561978 FAM155AB1AL88 458 aaPredicted RBP13.14□□□□□ -0.31
PCAT1-202ENST00000561978 GDF11O95390 407 aa13.14□□□□□ -0.31
PCAT1-202ENST00000561978 SERPINC1P01008 464 aa13.14□□□□□ -0.31
PCAT1-202ENST00000561978 ERCC5P28715 1186 aaPredicted RBP13.14□□□□□ -0.31
PCAT1-202ENST00000561978 LONP1P36776 959 aaKnown RBP13.14□□□□□ -0.31
PCAT1-202ENST00000561978 UBASH3AP57075 661 aa13.14□□□□□ -0.31
PCAT1-202ENST00000561978 CCDC84Q86UT8 332 aaPredicted RBP13.14□□□□□ -0.31
PCAT1-202ENST00000561978 RASAL3Q86YV0 1011 aa13.14□□□□□ -0.31
PCAT1-202ENST00000561978 C17orf53Q8N3J3 647 aaPredicted RBP13.14□□□□□ -0.31
PCAT1-202ENST00000561978 ENOX1Q8TC92 643 aaKnown RBP13.14□□□□□ -0.31
PCAT1-202ENST00000561978 DHX58Q96C10 678 aa13.14□□□□□ -0.31
PCAT1-202ENST00000561978 GSDMAQ96QA5 445 aa13.14□□□□□ -0.31
PCAT1-202ENST00000561978 SWAP70Q9UH65 585 aa13.14□□□□□ -0.31
PCAT1-202ENST00000561978 MYH8P13535 1937 aa13.14□□□□□ -0.31
PCAT1-202ENST00000561978 VWA3AA6NCI4 1184 aa13.13□□□□□ -0.31
PCAT1-202ENST00000561978 LAD1O00515 517 aa13.13□□□□□ -0.31
PCAT1-202ENST00000561978 SKILP12757 684 aa13.13□□□□□ -0.31
PCAT1-202ENST00000561978 TXLNAP40222 546 aa13.13□□□□□ -0.31
PCAT1-202ENST00000561978 SH3RF1Q7Z6J0 888 aa13.13□□□□□ -0.31
PCAT1-202ENST00000561978 RRP36Q96EU6 259 aaKnown RBP13.13□□□□□ -0.31
PCAT1-202ENST00000561978 EPSTI1Q96J88 318 aa13.13□□□□□ -0.31
PCAT1-202ENST00000561978 EHD4Q9H223 541 aa13.13□□□□□ -0.31
PCAT1-202ENST00000561978 PCDHB8Q9UN66 801 aa13.13□□□□□ -0.31
PCAT1-202ENST00000561978 ATAD5Q96QE3 1844 aa13.12□□□□□ -0.31
PCAT1-202ENST00000561978 UQCRHLA0A096LP55 91 aa13.12□□□□□ -0.31
PCAT1-202ENST00000561978 hCG_1984214I3L0E3 225 aa13.12□□□□□ -0.31
PCAT1-202ENST00000561978 DYNC1I1O14576 645 aa13.12□□□□□ -0.31
PCAT1-202ENST00000561978 FOXN1O15353 648 aa13.12□□□□□ -0.31
PCAT1-202ENST00000561978 UQCRHP07919 91 aa13.12□□□□□ -0.31
PCAT1-202ENST00000561978 SLC10A3P09131 477 aa13.12□□□□□ -0.31
PCAT1-202ENST00000561978 GNA11P29992 359 aa13.12□□□□□ -0.31
PCAT1-202ENST00000561978 MCM7P33993 719 aa13.12□□□□□ -0.31
PCAT1-202ENST00000561978 ECE1P42892 770 aa13.12□□□□□ -0.31
PCAT1-202ENST00000561978 JAG1P78504 1218 aa13.12□□□□□ -0.31
PCAT1-202ENST00000561978 GABPAQ06546 454 aa13.12□□□□□ -0.31
PCAT1-202ENST00000561978 PPP4R3BQ5MIZ7 849 aa13.12□□□□□ -0.31
PCAT1-202ENST00000561978 USP49Q70CQ1 688 aa13.12□□□□□ -0.31
PCAT1-202ENST00000561978 ZNF713Q8N859 430 aaPredicted RBP13.12□□□□□ -0.31
PCAT1-202ENST00000561978 MYRIPQ8NFW9 859 aa13.12□□□□□ -0.31
PCAT1-202ENST00000561978 OPTNQ96CV9 577 aa13.12□□□□□ -0.31
PCAT1-202ENST00000561978 PAGE5Q96GU1 130 aa13.12□□□□□ -0.31
PCAT1-202ENST00000561978 SEC63Q9UGP8 760 aaKnown RBP13.12□□□□□ -0.31
PCAT1-202ENST00000561978 BAZ2BQ9UIF8 2168 aaKnown RBP13.12□□□□□ -0.31
PCAT1-202ENST00000561978 M0R2N6 131 aa13.12□□□□□ -0.31
PCAT1-202ENST00000561978 STXBP3O00186 592 aa13.12□□□□□ -0.31
PCAT1-202ENST00000561978 CYTH3O43739 400 aa13.12□□□□□ -0.31
PCAT1-202ENST00000561978 CTNND1O60716 968 aaKnown RBP13.12□□□□□ -0.31
PCAT1-202ENST00000561978 BMP6P22004 513 aa13.12□□□□□ -0.31
PCAT1-202ENST00000561978 SHMT1P34896 483 aa13.12□□□□□ -0.31
PCAT1-202ENST00000561978 GJA5P36382 358 aa13.12□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms