RNA–Protein interactions for RNA: ENST00000561061.5

ZEB1-221, Transcript of zinc finger E-box binding homeobox 1, humanhuman

TSL 1 (best)

Gene ZEB1, Length 970 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZEB1-221ENST00000561061 KCNA10Q16322 511 aa8.03□□□□□ -1.12
ZEB1-221ENST00000561061 MSS51Q4VC12 460 aa8.03□□□□□ -1.12
ZEB1-221ENST00000561061 SLC9C2Q5TAH2 1124 aa8.03□□□□□ -1.12
ZEB1-221ENST00000561061 ZKSCAN2Q63HK3 967 aa8.03□□□□□ -1.12
ZEB1-221ENST00000561061 PSRC1Q6PGN9 363 aaPredicted RBP8.03□□□□□ -1.12
ZEB1-221ENST00000561061 LIAT1Q6ZQX7 453 aa8.03□□□□□ -1.12
ZEB1-221ENST00000561061 CCDC129Q6ZRS4 1044 aa8.03□□□□□ -1.12
ZEB1-221ENST00000561061 AACSQ86V21 672 aa8.03□□□□□ -1.12
ZEB1-221ENST00000561061 ASB2Q96Q27 587 aa8.03□□□□□ -1.12
ZEB1-221ENST00000561061 UPF3AQ9H1J1 476 aaKnown RBP8.03□□□□□ -1.12
ZEB1-221ENST00000561061 EXOC6BQ9Y2D4 811 aa8.03□□□□□ -1.12
ZEB1-221ENST00000561061 ELP1O95163 1332 aa8.03□□□□□ -1.12
ZEB1-221ENST00000561061 CYP2D7A0A087X1C5 515 aa8.02□□□□□ -1.13
ZEB1-221ENST00000561061 A0A0U1RQG5 324 aaPredicted RBP8.02□□□□□ -1.13
ZEB1-221ENST00000561061 PRKAB2O43741 272 aa8.02□□□□□ -1.13
ZEB1-221ENST00000561061 DUSP11O75319 330 aaKnown RBP8.02□□□□□ -1.13
ZEB1-221ENST00000561061 SNAI1O95863 264 aaPredicted RBP8.02□□□□□ -1.13
ZEB1-221ENST00000561061 EEF2P13639 858 aaKnown RBP8.02□□□□□ -1.13
ZEB1-221ENST00000561061 CSF2RAP15509 400 aa8.02□□□□□ -1.13
ZEB1-221ENST00000561061 NDUFV2P19404 249 aa8.02□□□□□ -1.13
ZEB1-221ENST00000561061 CDK8P49336 464 aa8.02□□□□□ -1.13
ZEB1-221ENST00000561061 CDK7P50613 346 aa8.02□□□□□ -1.13
ZEB1-221ENST00000561061 MRPS5P82675 430 aaKnown RBP8.02□□□□□ -1.13
ZEB1-221ENST00000561061 FAM83BQ5T0W9 1011 aa8.02□□□□□ -1.13
ZEB1-221ENST00000561061 CCDC174Q6PII3 467 aa8.02□□□□□ -1.13
ZEB1-221ENST00000561061 MAMDC4Q6UXC1 1216 aa8.02□□□□□ -1.13
ZEB1-221ENST00000561061 C16orf86Q6ZW13 317 aa8.02□□□□□ -1.13
ZEB1-221ENST00000561061 ZNF365Q70YC5 407 aa8.02□□□□□ -1.13
ZEB1-221ENST00000561061 MSL3Q8N5Y2 521 aaKnown RBP8.02□□□□□ -1.13
ZEB1-221ENST00000561061 CCDC17Q96LX7 622 aa8.02□□□□□ -1.13
ZEB1-221ENST00000561061 UHRF1Q96T88 793 aaPredicted RBP8.02□□□□□ -1.13
ZEB1-221ENST00000561061 PPP1R12CQ9BZL4 782 aa8.02□□□□□ -1.13
ZEB1-221ENST00000561061 ARMT1Q9H993 441 aa8.02□□□□□ -1.13
ZEB1-221ENST00000561061 GOPCQ9HD26 462 aa8.02□□□□□ -1.13
ZEB1-221ENST00000561061 ZHX1Q9UKY1 873 aaPredicted RBP8.02□□□□□ -1.13
ZEB1-221ENST00000561061 FAM184BQ9ULE4 1060 aa8.02□□□□□ -1.13
ZEB1-221ENST00000561061 PCDHGC3Q9UN70 934 aa8.02□□□□□ -1.13
ZEB1-221ENST00000561061 FCF1Q9Y324 198 aaKnown RBP8.02□□□□□ -1.13
ZEB1-221ENST00000561061 WDFY4Q6ZS81 3184 aa8.02□□□□□ -1.13
ZEB1-221ENST00000561061 C5orf42Q9H799 3197 aa8.02□□□□□ -1.13
ZEB1-221ENST00000561061 ZBED9Q6R2W3 1325 aa8.02□□□□□ -1.13
ZEB1-221ENST00000561061 LOXHD1Q8IVV2 1947 aa8.01□□□□□ -1.13
ZEB1-221ENST00000561061 RALGAPA2Q2PPJ7 1873 aa8.01□□□□□ -1.13
ZEB1-221ENST00000561061 DNAJC25-GNG10A0A024R161 153 aa8.01□□□□□ -1.13
ZEB1-221ENST00000561061 ARVCFO00192 962 aa8.01□□□□□ -1.13
ZEB1-221ENST00000561061 GOLIM4O00461 696 aa8.01□□□□□ -1.13
ZEB1-221ENST00000561061 MBD4O95243 580 aa8.01□□□□□ -1.13
ZEB1-221ENST00000561061 ASGR1P07306 291 aa8.01□□□□□ -1.13
ZEB1-221ENST00000561061 C6orf222P0C671 652 aaPredicted RBP8.01□□□□□ -1.13
ZEB1-221ENST00000561061 FDX1P10109 184 aa8.01□□□□□ -1.13
ZEB1-221ENST00000561061 ACRP10323 421 aa8.01□□□□□ -1.13
ZEB1-221ENST00000561061 RLBP1P12271 317 aa8.01□□□□□ -1.13
ZEB1-221ENST00000561061 SLC19A1P41440 591 aa8.01□□□□□ -1.13
ZEB1-221ENST00000561061 RAB30Q15771 203 aa8.01□□□□□ -1.13
ZEB1-221ENST00000561061 CCDC85BQ15834 202 aaPredicted RBP8.01□□□□□ -1.13
ZEB1-221ENST00000561061 C12orf60Q5U649 245 aa8.01□□□□□ -1.13
ZEB1-221ENST00000561061 SNRNP48Q6IEG0 339 aaKnown RBP8.01□□□□□ -1.13
ZEB1-221ENST00000561061 CEP85Q6P2H3 762 aa8.01□□□□□ -1.13
ZEB1-221ENST00000561061 ERC1Q8IUD2 1116 aa8.01□□□□□ -1.13
ZEB1-221ENST00000561061 ITPRIPQ8IWB1 547 aa8.01□□□□□ -1.13
ZEB1-221ENST00000561061 FAM126BQ8IXS8 530 aa8.01□□□□□ -1.13
ZEB1-221ENST00000561061 TMEM199Q8N511 208 aa8.01□□□□□ -1.13
ZEB1-221ENST00000561061 PPIL4Q8WUA2 492 aaKnown RBP eCLIP8.01□□□□□ -1.13
ZEB1-221ENST00000561061 HERVK_113Q902F9 699 aa8.01□□□□□ -1.13
ZEB1-221ENST00000561061 FGD4Q96M96 766 aa8.01□□□□□ -1.13
ZEB1-221ENST00000561061 GLT1D1Q96MS3 346 aa8.01□□□□□ -1.13
ZEB1-221ENST00000561061 DNAJC2Q99543 621 aaKnown RBP8.01□□□□□ -1.13
ZEB1-221ENST00000561061 TEX13BQ9BXU2 312 aa8.01□□□□□ -1.13
ZEB1-221ENST00000561061 NKX2-4Q9H2Z4 354 aa8.01□□□□□ -1.13
ZEB1-221ENST00000561061 IL23AQ9NPF7 189 aa8.01□□□□□ -1.13
ZEB1-221ENST00000561061 CXXC1Q9P0U4 656 aaPredicted RBP8.01□□□□□ -1.13
ZEB1-221ENST00000561061 MSRAQ9UJ68 235 aa8.01□□□□□ -1.13
ZEB1-221ENST00000561061 YBX2Q9Y2T7 364 aaKnown RBP8.01□□□□□ -1.13
ZEB1-221ENST00000561061 DOCK5Q9H7D0 1870 aa8□□□□□ -1.13
ZEB1-221ENST00000561061 APBB1O00213 710 aa8□□□□□ -1.13
ZEB1-221ENST00000561061 CTAGE5O15320 804 aa8□□□□□ -1.13
ZEB1-221ENST00000561061 TLR3O15455 904 aaKnown RBP8□□□□□ -1.13
ZEB1-221ENST00000561061 CD4P01730 458 aa8□□□□□ -1.13
ZEB1-221ENST00000561061 IGFBP4P22692 258 aa8□□□□□ -1.13
ZEB1-221ENST00000561061 CYP2C18P33260 490 aa8□□□□□ -1.13
ZEB1-221ENST00000561061 ADD2P35612 726 aa8□□□□□ -1.13
ZEB1-221ENST00000561061 GJA9P57773 515 aa8□□□□□ -1.13
ZEB1-221ENST00000561061 ACVR2BQ13705 512 aa8□□□□□ -1.13
ZEB1-221ENST00000561061 CCDC144BQ3MJ40 725 aa8□□□□□ -1.13
ZEB1-221ENST00000561061 SLFNL1Q499Z3 407 aa8□□□□□ -1.13
ZEB1-221ENST00000561061 FTSJ3Q8IY81 847 aaKnown RBP8□□□□□ -1.13
ZEB1-221ENST00000561061 PCSK9Q8NBP7 692 aaKnown RBP8□□□□□ -1.13
ZEB1-221ENST00000561061 IL27Q8NEV9 243 aa8□□□□□ -1.13
ZEB1-221ENST00000561061 FAM122AQ96E09 287 aa8□□□□□ -1.13
ZEB1-221ENST00000561061 NECAB3Q96P71 396 aaPredicted RBP8□□□□□ -1.13
ZEB1-221ENST00000561061 NUP88Q99567 741 aaPredicted RBP8□□□□□ -1.13
ZEB1-221ENST00000561061 USB1Q9BQ65 265 aaKnown RBP8□□□□□ -1.13
ZEB1-221ENST00000561061 SLF1Q9BQI6 1058 aa8□□□□□ -1.13
ZEB1-221ENST00000561061 KANSL2Q9H9L4 492 aa8□□□□□ -1.13
ZEB1-221ENST00000561061 IL1RAPL2Q9NP60 686 aa8□□□□□ -1.13
ZEB1-221ENST00000561061 ATP8A2Q9NTI2 1148 aa8□□□□□ -1.13
ZEB1-221ENST00000561061 RIPK3Q9Y572 518 aa8□□□□□ -1.13
ZEB1-221ENST00000561061 ASTN1O14525 1302 aa8□□□□□ -1.13
ZEB1-221ENST00000561061 UMODL1Q5DID0 1318 aa8□□□□□ -1.13
ZEB1-221ENST00000561061 USP17L12C9JPN9 530 aa7.99□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms