RNA–Protein interactions for RNA: ENST00000560433.5

SNRPA1-211, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 2

Gene SNRPA1, Length 2,440 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-211ENST00000560433 E2F4Q16254 413 aa12.31□□□□□ -0.44
SNRPA1-211ENST00000560433 APOBEC3FQ8IUX4 373 aaKnown RBP12.31□□□□□ -0.44
SNRPA1-211ENST00000560433 CYP2W1Q8TAV3 490 aa12.31□□□□□ -0.44
SNRPA1-211ENST00000560433 WNK4Q96J92 1243 aa12.31□□□□□ -0.44
SNRPA1-211ENST00000560433 ZNF830Q96NB3 372 aaPredicted RBP12.31□□□□□ -0.44
SNRPA1-211ENST00000560433 EMILIN3Q9NT22 766 aa12.31□□□□□ -0.44
SNRPA1-211ENST00000560433 DDX25Q9UHL0 483 aaKnown RBP12.31□□□□□ -0.44
SNRPA1-211ENST00000560433 CUL4BQ13620 913 aa12.3□□□□□ -0.44
SNRPA1-211ENST00000560433 CHURC1Q8WUH1 139 aa12.3□□□□□ -0.44
SNRPA1-211ENST00000560433 CNKSR2Q8WXI2 1034 aa12.3□□□□□ -0.44
SNRPA1-211ENST00000560433 SMARCE1Q969G3 411 aa12.3□□□□□ -0.44
SNRPA1-211ENST00000560433 SH2D4AQ9H788 454 aa12.3□□□□□ -0.44
SNRPA1-211ENST00000560433 MARCH6O60337 910 aa12.3□□□□□ -0.44
SNRPA1-211ENST00000560433 FLOT1O75955 427 aa12.3□□□□□ -0.44
SNRPA1-211ENST00000560433 PTPRAP18433 802 aa12.3□□□□□ -0.44
SNRPA1-211ENST00000560433 VCAM1P19320 739 aa12.3□□□□□ -0.44
SNRPA1-211ENST00000560433 STAT6P42226 847 aa12.3□□□□□ -0.44
SNRPA1-211ENST00000560433 HMGCS2P54868 508 aa12.3□□□□□ -0.44
SNRPA1-211ENST00000560433 NAALADL2Q58DX5 795 aa12.3□□□□□ -0.44
SNRPA1-211ENST00000560433 DCAF15Q66K64 600 aa12.3□□□□□ -0.44
SNRPA1-211ENST00000560433 MOB2Q70IA6 237 aa12.3□□□□□ -0.44
SNRPA1-211ENST00000560433 KLRG1Q96E93 195 aa12.3□□□□□ -0.44
SNRPA1-211ENST00000560433 MTMR9Q96QG7 549 aa12.3□□□□□ -0.44
SNRPA1-211ENST00000560433 NUDT12Q9BQG2 462 aa12.3□□□□□ -0.44
SNRPA1-211ENST00000560433 TRIM5Q9C035 493 aa12.3□□□□□ -0.44
SNRPA1-211ENST00000560433 TTC12Q9H892 705 aaPredicted RBP12.3□□□□□ -0.44
SNRPA1-211ENST00000560433 DISC1Q9NRI5 854 aa12.3□□□□□ -0.44
SNRPA1-211ENST00000560433 SSC5DA1L4H1 1573 aa12.3□□□□□ -0.44
SNRPA1-211ENST00000560433 SPDYE3A6NKU9 549 aa12.29□□□□□ -0.44
SNRPA1-211ENST00000560433 PTMAP06454 111 aaKnown RBP12.29□□□□□ -0.44
SNRPA1-211ENST00000560433 MMP14P50281 582 aa12.29□□□□□ -0.44
SNRPA1-211ENST00000560433 PDXDC2PQ6P474 469 aa12.29□□□□□ -0.44
SNRPA1-211ENST00000560433 LDHDQ86WU2 507 aa12.29□□□□□ -0.44
SNRPA1-211ENST00000560433 TRMT44Q8IYL2 757 aaKnown RBP12.29□□□□□ -0.44
SNRPA1-211ENST00000560433 SCYL3Q8IZE3 742 aa12.29□□□□□ -0.44
SNRPA1-211ENST00000560433 FAM177A1Q8N128 213 aaPredicted RBP12.29□□□□□ -0.44
SNRPA1-211ENST00000560433 IQUBQ8NA54 791 aa12.29□□□□□ -0.44
SNRPA1-211ENST00000560433 HAS1Q92839 578 aa12.29□□□□□ -0.44
SNRPA1-211ENST00000560433 RANBP17Q9H2T7 1088 aaKnown RBP12.29□□□□□ -0.44
SNRPA1-211ENST00000560433 RPAP3Q9H6T3 665 aaPredicted RBP12.29□□□□□ -0.44
SNRPA1-211ENST00000560433 RAVER2Q9HCJ3 691 aaKnown RBP12.29□□□□□ -0.44
SNRPA1-211ENST00000560433 PICK1Q9NRD5 415 aa12.29□□□□□ -0.44
SNRPA1-211ENST00000560433 MORC2Q9Y6X9 1032 aaPredicted RBP12.29□□□□□ -0.44
SNRPA1-211ENST00000560433 PLCG1P19174 1290 aa12.29□□□□□ -0.44
SNRPA1-211ENST00000560433 TXLNAP40222 546 aa12.29□□□□□ -0.44
SNRPA1-211ENST00000560433 PRR16Q569H4 304 aa12.29□□□□□ -0.44
SNRPA1-211ENST00000560433 RRAGBQ5VZM2 374 aa12.29□□□□□ -0.44
SNRPA1-211ENST00000560433 CABP7Q86V35 215 aa12.29□□□□□ -0.44
SNRPA1-211ENST00000560433 MMTAG2Q9BU76 263 aaKnown RBP12.29□□□□□ -0.44
SNRPA1-211ENST00000560433 ADARB2Q9NS39 739 aaKnown RBP12.29□□□□□ -0.44
SNRPA1-211ENST00000560433 FEM1BQ9UK73 627 aa12.29□□□□□ -0.44
SNRPA1-211ENST00000560433 FAM86B1E9PN63 330 aa12.28□□□□□ -0.44
SNRPA1-211ENST00000560433 PEX10O60683 326 aa12.28□□□□□ -0.44
SNRPA1-211ENST00000560433 FAM86B2P0C5J1 330 aa12.28□□□□□ -0.44
SNRPA1-211ENST00000560433 SARSP49591 514 aaKnown RBP12.28□□□□□ -0.44
SNRPA1-211ENST00000560433 ARHGAP4P98171 946 aa12.28□□□□□ -0.44
SNRPA1-211ENST00000560433 PTPN21Q16825 1174 aa12.28□□□□□ -0.44
SNRPA1-211ENST00000560433 KLHL10Q6JEL2 608 aa12.28□□□□□ -0.44
SNRPA1-211ENST00000560433 SH3RF1Q7Z6J0 888 aa12.28□□□□□ -0.44
SNRPA1-211ENST00000560433 NAT10Q9H0A0 1025 aaKnown RBP12.28□□□□□ -0.44
SNRPA1-211ENST00000560433 KIAA1683Q9H0B3 1180 aa12.28□□□□□ -0.44
SNRPA1-211ENST00000560433 HOOK1Q9UJC3 728 aaKnown RBP12.28□□□□□ -0.44
SNRPA1-211ENST00000560433 MAPK8IP1Q9UQF2 711 aa12.28□□□□□ -0.44
SNRPA1-211ENST00000560433 ZNF536O15090 1300 aa12.28□□□□□ -0.44
SNRPA1-211ENST00000560433 LAD1O00515 517 aa12.28□□□□□ -0.44
SNRPA1-211ENST00000560433 NFIBO00712 420 aa12.28□□□□□ -0.44
SNRPA1-211ENST00000560433 USP2O75604 605 aaPredicted RBP12.28□□□□□ -0.44
SNRPA1-211ENST00000560433 STAT3P40763 770 aa12.28□□□□□ -0.44
SNRPA1-211ENST00000560433 PRPHP41219 470 aa12.28□□□□□ -0.44
SNRPA1-211ENST00000560433 DPYDQ12882 1025 aa12.28□□□□□ -0.44
SNRPA1-211ENST00000560433 EAPPQ56P03 285 aaPredicted RBP12.28□□□□□ -0.44
SNRPA1-211ENST00000560433 DCPSQ96C86 337 aaKnown RBP12.28□□□□□ -0.44
SNRPA1-211ENST00000560433 HOOK2Q96ED9 719 aa12.28□□□□□ -0.44
SNRPA1-211ENST00000560433 SLF1Q9BQI6 1058 aa12.28□□□□□ -0.44
SNRPA1-211ENST00000560433 LRWD1Q9UFC0 647 aa12.28□□□□□ -0.44
SNRPA1-211ENST00000560433 CCPG1Q9ULG6 757 aa12.28□□□□□ -0.44
SNRPA1-211ENST00000560433 SYNPO2Q9UMS6 1093 aa12.28□□□□□ -0.44
SNRPA1-211ENST00000560433 ALAS1P13196 640 aa12.27□□□□□ -0.44
SNRPA1-211ENST00000560433 ATP1A3P13637 1013 aa12.27□□□□□ -0.44
SNRPA1-211ENST00000560433 BACE1P56817 501 aa12.27□□□□□ -0.44
SNRPA1-211ENST00000560433 STX17P56962 302 aa12.27□□□□□ -0.44
SNRPA1-211ENST00000560433 FMR1Q06787 632 aaKnown RBP eCLIP12.27□□□□□ -0.44
SNRPA1-211ENST00000560433 NCAPHQ15003 741 aa12.27□□□□□ -0.44
SNRPA1-211ENST00000560433 ECM1Q16610 540 aa12.27□□□□□ -0.44
SNRPA1-211ENST00000560433 PPP4R3AQ6IN85 833 aa12.27□□□□□ -0.44
SNRPA1-211ENST00000560433 KRT26Q7Z3Y9 468 aa12.27□□□□□ -0.44
SNRPA1-211ENST00000560433 SULF1Q8IWU6 871 aa12.27□□□□□ -0.44
SNRPA1-211ENST00000560433 PRPF38AQ8NAV1 312 aaKnown RBP12.27□□□□□ -0.44
SNRPA1-211ENST00000560433 ZNF280CQ8ND82 737 aa12.27□□□□□ -0.44
SNRPA1-211ENST00000560433 RRAGDQ9NQL2 400 aaPredicted RBP12.27□□□□□ -0.44
SNRPA1-211ENST00000560433 NRBP1Q9UHY1 535 aa12.27□□□□□ -0.44
SNRPA1-211ENST00000560433 ZNF112Q9UJU3 913 aa12.27□□□□□ -0.44
SNRPA1-211ENST00000560433 WDR46O15213 610 aaKnown RBP12.27□□□□□ -0.45
SNRPA1-211ENST00000560433 CD44P16070 742 aaKnown RBP12.27□□□□□ -0.45
SNRPA1-211ENST00000560433 MORC3Q14149 939 aa12.27□□□□□ -0.45
SNRPA1-211ENST00000560433 DPY19L2Q6NUT2 758 aa12.27□□□□□ -0.45
SNRPA1-211ENST00000560433 KANK3Q6NY19 840 aa12.27□□□□□ -0.45
SNRPA1-211ENST00000560433 FAM160B2Q86V87 743 aa12.27□□□□□ -0.45
SNRPA1-211ENST00000560433 IGSF22Q8N9C0 903 aa12.27□□□□□ -0.45
SNRPA1-211ENST00000560433 ATG4CQ96DT6 458 aa12.27□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms