RNA–Protein interactions for RNA: ENST00000560383.5

SNRPA1-210, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 4

Gene SNRPA1, Length 565 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-210ENST00000560383 PCSK9Q8NBP7 692 aaKnown RBP17.7■□□□□ 0.42
SNRPA1-210ENST00000560383 TRIM43Q96BQ3 446 aaPredicted RBP17.7■□□□□ 0.42
SNRPA1-210ENST00000560383 JMJD4Q9H9V9 463 aa17.7■□□□□ 0.42
SNRPA1-210ENST00000560383 STARD7Q9NQZ5 370 aa17.7■□□□□ 0.42
SNRPA1-210ENST00000560383 MAD2L2Q9UI95 211 aa17.7■□□□□ 0.42
SNRPA1-210ENST00000560383 ASTN1O14525 1302 aa17.7■□□□□ 0.42
SNRPA1-210ENST00000560383 ELP1O95163 1332 aa17.7■□□□□ 0.42
SNRPA1-210ENST00000560383 MROH7Q68CQ1 1323 aa17.7■□□□□ 0.42
SNRPA1-210ENST00000560383 ADCY6O43306 1168 aa17.69■□□□□ 0.42
SNRPA1-210ENST00000560383 GRM4Q14833 912 aa17.69■□□□□ 0.42
SNRPA1-210ENST00000560383 KCNA10Q16322 511 aa17.69■□□□□ 0.42
SNRPA1-210ENST00000560383 CDC37Q16543 378 aaPredicted RBP17.69■□□□□ 0.42
SNRPA1-210ENST00000560383 TSGA10IPQ3SY00 556 aa17.69■□□□□ 0.42
SNRPA1-210ENST00000560383 TMEM67Q5HYA8 995 aa17.69■□□□□ 0.42
SNRPA1-210ENST00000560383 RNF20Q5VTR2 975 aa17.69■□□□□ 0.42
SNRPA1-210ENST00000560383 CHST3Q7LGC8 479 aa17.69■□□□□ 0.42
SNRPA1-210ENST00000560383 SH3RF1Q7Z6J0 888 aa17.69■□□□□ 0.42
SNRPA1-210ENST00000560383 STAG2Q8N3U4 1231 aa17.69■□□□□ 0.42
SNRPA1-210ENST00000560383 RGS22Q8NE09 1264 aa17.69■□□□□ 0.42
SNRPA1-210ENST00000560383 BADQ92934 168 aa17.69■□□□□ 0.42
SNRPA1-210ENST00000560383 MTMR8Q96EF0 704 aa17.69■□□□□ 0.42
SNRPA1-210ENST00000560383 GLT1D1Q96MS3 346 aa17.69■□□□□ 0.42
SNRPA1-210ENST00000560383 MTMR10Q9NXD2 777 aa17.69■□□□□ 0.42
SNRPA1-210ENST00000560383 UNC80Q8N2C7 3258 aa17.68■□□□□ 0.42
SNRPA1-210ENST00000560383 LOC102724159A0A0B4J2E5 919 aa17.68■□□□□ 0.42
SNRPA1-210ENST00000560383 KLRF2D3W0D1 207 aa17.68■□□□□ 0.42
SNRPA1-210ENST00000560383 C6orf222P0C671 652 aaPredicted RBP17.68■□□□□ 0.42
SNRPA1-210ENST00000560383 MCM5P33992 734 aa17.68■□□□□ 0.42
SNRPA1-210ENST00000560383 COL9A3Q14050 684 aaPredicted RBP17.68■□□□□ 0.42
SNRPA1-210ENST00000560383 PWP2Q15269 919 aaKnown RBP17.68■□□□□ 0.42
SNRPA1-210ENST00000560383 NSMFQ6X4W1 530 aa17.68■□□□□ 0.42
SNRPA1-210ENST00000560383 MORC4Q8TE76 937 aa17.68■□□□□ 0.42
SNRPA1-210ENST00000560383 TMEM87BQ96K49 555 aa17.68■□□□□ 0.42
SNRPA1-210ENST00000560383 MAP3K14Q99558 947 aa17.68■□□□□ 0.42
SNRPA1-210ENST00000560383 LY9Q9HBG7 655 aa17.68■□□□□ 0.42
SNRPA1-210ENST00000560383 STXBP5LQ9Y2K9 1186 aa17.68■□□□□ 0.42
SNRPA1-210ENST00000560383 CDH23Q9H251 3354 aa17.68■□□□□ 0.42
SNRPA1-210ENST00000560383 EYSQ5T1H1 3165 aa17.67■□□□□ 0.42
SNRPA1-210ENST00000560383 MYADML2A6NDP7 307 aa17.67■□□□□ 0.42
SNRPA1-210ENST00000560383 DCDC2CA8MYV0 355 aa17.67■□□□□ 0.42
SNRPA1-210ENST00000560383 PRC1O43663 620 aa17.67■□□□□ 0.42
SNRPA1-210ENST00000560383 PQBP1O60828 265 aaKnown RBP17.67■□□□□ 0.42
SNRPA1-210ENST00000560383 LIFRP42702 1097 aa17.67■□□□□ 0.42
SNRPA1-210ENST00000560383 BAATQ14032 418 aaPredicted RBP17.67■□□□□ 0.42
SNRPA1-210ENST00000560383 QRICH1Q2TAL8 776 aa17.67■□□□□ 0.42
SNRPA1-210ENST00000560383 Q7L0L9 218 aa17.67■□□□□ 0.42
SNRPA1-210ENST00000560383 SH2B2O14492 632 aaPredicted RBP17.66■□□□□ 0.42
SNRPA1-210ENST00000560383 ASGR1P07306 291 aa17.66■□□□□ 0.42
SNRPA1-210ENST00000560383 FAAP100Q0VG06 881 aa17.66■□□□□ 0.42
SNRPA1-210ENST00000560383 SHHQ15465 462 aa17.66■□□□□ 0.42
SNRPA1-210ENST00000560383 SLC35G1Q2M3R5 365 aa17.66■□□□□ 0.42
SNRPA1-210ENST00000560383 RNF207Q6ZRF8 634 aa17.66■□□□□ 0.42
SNRPA1-210ENST00000560383 CATIPQ7Z7H3 387 aa17.66■□□□□ 0.42
SNRPA1-210ENST00000560383 TMTC2Q8N394 836 aa17.66■□□□□ 0.42
SNRPA1-210ENST00000560383 RIOX1Q9H6W3 641 aa17.66■□□□□ 0.42
SNRPA1-210ENST00000560383 GPHNQ9NQX3 736 aaPredicted RBP17.66■□□□□ 0.42
SNRPA1-210ENST00000560383 ADD3Q9UEY8 706 aaKnown RBP17.66■□□□□ 0.42
SNRPA1-210ENST00000560383 ABCB11O95342 1321 aa17.66■□□□□ 0.42
SNRPA1-210ENST00000560383 CTAGE5O15320 804 aa17.65■□□□□ 0.42
SNRPA1-210ENST00000560383 DDAH1O94760 285 aa17.65■□□□□ 0.42
SNRPA1-210ENST00000560383 RAG1P15918 1043 aa17.65■□□□□ 0.42
SNRPA1-210ENST00000560383 ITGB8P26012 769 aa17.65■□□□□ 0.42
SNRPA1-210ENST00000560383 CDK7P50613 346 aa17.65■□□□□ 0.42
SNRPA1-210ENST00000560383 RPS6P62753 249 aaKnown RBP17.65■□□□□ 0.42
SNRPA1-210ENST00000560383 TNFAIP2Q03169 654 aa17.65■□□□□ 0.42
SNRPA1-210ENST00000560383 GNASQ5JWF2 1037 aa17.65■□□□□ 0.42
SNRPA1-210ENST00000560383 C9orf50Q5SZB4 431 aa17.65■□□□□ 0.42
SNRPA1-210ENST00000560383 SLC30A10Q6XR72 485 aa17.65■□□□□ 0.42
SNRPA1-210ENST00000560383 FBXO11Q86XK2 927 aa17.65■□□□□ 0.42
SNRPA1-210ENST00000560383 RASEFQ8IZ41 740 aa17.65■□□□□ 0.42
SNRPA1-210ENST00000560383 ZNF654Q8IZM8 581 aa17.65■□□□□ 0.42
SNRPA1-210ENST00000560383 KCNB2Q92953 911 aa17.65■□□□□ 0.42
SNRPA1-210ENST00000560383 PURBQ96QR8 312 aaKnown RBP17.65■□□□□ 0.42
SNRPA1-210ENST00000560383 TMEM39AQ9NV64 488 aa17.65■□□□□ 0.42
SNRPA1-210ENST00000560383 TBX21Q9UL17 535 aa17.65■□□□□ 0.42
SNRPA1-210ENST00000560383 GNEQ9Y223 722 aaKnown RBP17.65■□□□□ 0.42
SNRPA1-210ENST00000560383 A0A0U1RQG5 324 aaPredicted RBP17.64■□□□□ 0.41
SNRPA1-210ENST00000560383 PTPDC1A2A3K4 754 aa17.64■□□□□ 0.41
SNRPA1-210ENST00000560383 ZBTB5O15062 677 aa17.64■□□□□ 0.41
SNRPA1-210ENST00000560383 DHX16O60231 1041 aaKnown RBP17.64■□□□□ 0.41
SNRPA1-210ENST00000560383 SMAD3P84022 425 aaKnown RBP17.64■□□□□ 0.41
SNRPA1-210ENST00000560383 GHRHRQ02643 423 aa17.64■□□□□ 0.41
SNRPA1-210ENST00000560383 USH1GQ495M9 461 aa17.64■□□□□ 0.41
SNRPA1-210ENST00000560383 TLK2Q86UE8 772 aa17.64■□□□□ 0.41
SNRPA1-210ENST00000560383 NEK1Q96PY6 1258 aa17.64■□□□□ 0.41
SNRPA1-210ENST00000560383 VAT1LQ9HCJ6 419 aa17.64■□□□□ 0.41
SNRPA1-210ENST00000560383 VTA1Q9NP79 307 aa17.64■□□□□ 0.41
SNRPA1-210ENST00000560383 Q9Y3F1 56 aa17.64■□□□□ 0.41
SNRPA1-210ENST00000560383 C11orf97A0A1B0GVM6 126 aaPredicted RBP17.63■□□□□ 0.41
SNRPA1-210ENST00000560383 ARVCFO00192 962 aa17.63■□□□□ 0.41
SNRPA1-210ENST00000560383 EPB41L2O43491 1005 aaKnown RBP17.63■□□□□ 0.41
SNRPA1-210ENST00000560383 CYTH3O43739 400 aa17.63■□□□□ 0.41
SNRPA1-210ENST00000560383 PPP1R11O60927 126 aaPredicted RBP17.63■□□□□ 0.41
SNRPA1-210ENST00000560383 CABYRO75952 493 aa17.63■□□□□ 0.41
SNRPA1-210ENST00000560383 EDNRBP24530 442 aa17.63■□□□□ 0.41
SNRPA1-210ENST00000560383 SMARCA1P28370 1054 aa17.63■□□□□ 0.41
SNRPA1-210ENST00000560383 ALDH5A1P51649 535 aaPredicted RBP17.63■□□□□ 0.41
SNRPA1-210ENST00000560383 IRX5P78411 483 aaPredicted RBP17.63■□□□□ 0.41
SNRPA1-210ENST00000560383 EXOSC10Q01780 885 aaKnown RBP17.63■□□□□ 0.41
SNRPA1-210ENST00000560383 FPGSQ05932 587 aa17.63■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 716 ms