RNA–Protein interactions for RNA: ENST00000560320.1

CRTC3-209, Transcript of CREB regulated transcription coactivator 3, humanhuman

TSL 4

Gene CRTC3, Length 554 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRTC3-209ENST00000560320 TMEM260Q9NX78 707 aa12.06□□□□□ -0.48
CRTC3-209ENST00000560320 KCNH3Q9ULD8 1083 aa12.06□□□□□ -0.48
CRTC3-209ENST00000560320 COL11A1P12107 1806 aaPredicted RBP12.05□□□□□ -0.48
CRTC3-209ENST00000560320 FSD2A1L4K1 749 aa12.05□□□□□ -0.48
CRTC3-209ENST00000560320 VWA3AA6NCI4 1184 aa12.05□□□□□ -0.48
CRTC3-209ENST00000560320 NEMFO60524 1076 aa12.05□□□□□ -0.48
CRTC3-209ENST00000560320 OR52Z1P0C646 297 aa12.05□□□□□ -0.48
CRTC3-209ENST00000560320 VCAM1P19320 739 aa12.05□□□□□ -0.48
CRTC3-209ENST00000560320 LONP1P36776 959 aaKnown RBP12.05□□□□□ -0.48
CRTC3-209ENST00000560320 PRPHP41219 470 aa12.05□□□□□ -0.48
CRTC3-209ENST00000560320 CLK2P49760 499 aaKnown RBP12.05□□□□□ -0.48
CRTC3-209ENST00000560320 TMEM266Q2M3C6 531 aa12.05□□□□□ -0.48
CRTC3-209ENST00000560320 KANK3Q6NY19 840 aa12.05□□□□□ -0.48
CRTC3-209ENST00000560320 SHC4Q6S5L8 630 aa12.05□□□□□ -0.48
CRTC3-209ENST00000560320 ANKRD13AQ8IZ07 590 aa12.05□□□□□ -0.48
CRTC3-209ENST00000560320 C12orf42Q96LP6 360 aa12.05□□□□□ -0.48
CRTC3-209ENST00000560320 ANO3Q9BYT9 981 aa12.05□□□□□ -0.48
CRTC3-209ENST00000560320 CSRNP2Q9H175 543 aa12.05□□□□□ -0.48
CRTC3-209ENST00000560320 GRPEL1Q9HAV7 217 aa12.05□□□□□ -0.48
CRTC3-209ENST00000560320 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.05□□□□□ -0.48
CRTC3-209ENST00000560320 USP25Q9UHP3 1055 aa12.05□□□□□ -0.48
CRTC3-209ENST00000560320 CCPG1Q9ULG6 757 aa12.05□□□□□ -0.48
CRTC3-209ENST00000560320 A0A0C4DFX4 3053 aa12.04□□□□□ -0.48
CRTC3-209ENST00000560320 FAM237AA0A1B0GTK4 181 aa12.04□□□□□ -0.48
CRTC3-209ENST00000560320 GCOM1H8Y6P7 765 aaPredicted RBP12.04□□□□□ -0.48
CRTC3-209ENST00000560320 ADAMTS3O15072 1205 aa12.04□□□□□ -0.48
CRTC3-209ENST00000560320 ICAM1P05362 532 aa12.04□□□□□ -0.48
CRTC3-209ENST00000560320 POLR2MP0CAP2 368 aa12.04□□□□□ -0.48
CRTC3-209ENST00000560320 HMGCS2P54868 508 aa12.04□□□□□ -0.48
CRTC3-209ENST00000560320 SNW1Q13573 536 aaKnown RBP12.04□□□□□ -0.48
CRTC3-209ENST00000560320 DEFB115Q30KQ5 88 aa12.04□□□□□ -0.48
CRTC3-209ENST00000560320 LDHDQ86WU2 507 aa12.04□□□□□ -0.48
CRTC3-209ENST00000560320 MCF2L2Q86YR7 1114 aa12.04□□□□□ -0.48
CRTC3-209ENST00000560320 CKAP2LQ8IYA6 745 aa12.04□□□□□ -0.48
CRTC3-209ENST00000560320 CNNM3Q8NE01 707 aa12.04□□□□□ -0.48
CRTC3-209ENST00000560320 RAB34Q9BZG1 259 aa12.04□□□□□ -0.48
CRTC3-209ENST00000560320 EMILIN3Q9NT22 766 aa12.04□□□□□ -0.48
CRTC3-209ENST00000560320 FBXO28Q9NVF7 368 aa12.04□□□□□ -0.48
CRTC3-209ENST00000560320 PPP1R9AQ9ULJ8 1098 aa12.04□□□□□ -0.48
CRTC3-209ENST00000560320 HPSEQ9Y251 543 aa12.04□□□□□ -0.48
CRTC3-209ENST00000560320 PAPPA2Q9BXP8 1791 aa12.03□□□□□ -0.48
CRTC3-209ENST00000560320 USP17L15C9J2P7 530 aa12.03□□□□□ -0.48
CRTC3-209ENST00000560320 USP17L13C9JLJ4 530 aa12.03□□□□□ -0.48
CRTC3-209ENST00000560320 USP17L11C9JVI0 530 aa12.03□□□□□ -0.48
CRTC3-209ENST00000560320 USP17L18D6R9N7 530 aa12.03□□□□□ -0.48
CRTC3-209ENST00000560320 USP17L22D6RA61 530 aa12.03□□□□□ -0.48
CRTC3-209ENST00000560320 USP17L17D6RBQ6 530 aa12.03□□□□□ -0.48
CRTC3-209ENST00000560320 USP17L19D6RCP7 530 aa12.03□□□□□ -0.48
CRTC3-209ENST00000560320 USP17L20D6RJB6 530 aa12.03□□□□□ -0.48
CRTC3-209ENST00000560320 CFBP00751 764 aa12.03□□□□□ -0.48
CRTC3-209ENST00000560320 USP11P51784 963 aa12.03□□□□□ -0.48
CRTC3-209ENST00000560320 SOX10P56693 466 aa12.03□□□□□ -0.48
CRTC3-209ENST00000560320 USP17L24Q0WX57 530 aa12.03□□□□□ -0.48
CRTC3-209ENST00000560320 VGLL4Q14135 290 aa12.03□□□□□ -0.48
CRTC3-209ENST00000560320 CALCRLQ16602 461 aa12.03□□□□□ -0.48
CRTC3-209ENST00000560320 USP17L6PQ6QN14 398 aa12.03□□□□□ -0.48
CRTC3-209ENST00000560320 PPP1R3FQ6ZSY5 799 aaPredicted RBP12.03□□□□□ -0.48
CRTC3-209ENST00000560320 ERO1BQ86YB8 467 aa12.03□□□□□ -0.48
CRTC3-209ENST00000560320 CEP57L1Q8IYX8 460 aa12.03□□□□□ -0.48
CRTC3-209ENST00000560320 SAMD3Q8N6K7 520 aa12.03□□□□□ -0.48
CRTC3-209ENST00000560320 RASSF8Q8NHQ8 419 aa12.03□□□□□ -0.48
CRTC3-209ENST00000560320 CCDC39Q9UFE4 941 aa12.03□□□□□ -0.48
CRTC3-209ENST00000560320 FZD1Q9UP38 647 aa12.03□□□□□ -0.48
CRTC3-209ENST00000560320 AFG3L2Q9Y4W6 797 aa12.03□□□□□ -0.48
CRTC3-209ENST00000560320 SNCAIPQ9Y6H5 919 aa12.03□□□□□ -0.48
CRTC3-209ENST00000560320 PIK3CDO00329 1044 aa12.02□□□□□ -0.49
CRTC3-209ENST00000560320 WNT7AO00755 349 aa12.02□□□□□ -0.49
CRTC3-209ENST00000560320 POLR2DO15514 142 aaKnown RBP12.02□□□□□ -0.49
CRTC3-209ENST00000560320 CAVIN2O95810 425 aa12.02□□□□□ -0.49
CRTC3-209ENST00000560320 ZNF76P36508 570 aa12.02□□□□□ -0.49
CRTC3-209ENST00000560320 PPATQ06203 517 aa12.02□□□□□ -0.49
CRTC3-209ENST00000560320 TYRO3Q06418 890 aa12.02□□□□□ -0.49
CRTC3-209ENST00000560320 COG2Q14746 738 aa12.02□□□□□ -0.49
CRTC3-209ENST00000560320 STX1AQ16623 288 aa12.02□□□□□ -0.49
CRTC3-209ENST00000560320 SH3D19Q5HYK7 790 aa12.02□□□□□ -0.49
CRTC3-209ENST00000560320 SPECC1Q5M775 1068 aa12.02□□□□□ -0.49
CRTC3-209ENST00000560320 PPP4R3AQ6IN85 833 aa12.02□□□□□ -0.49
CRTC3-209ENST00000560320 MOXD1Q6UVY6 613 aa12.02□□□□□ -0.49
CRTC3-209ENST00000560320 RBM43Q6ZSC3 357 aaKnown RBP12.02□□□□□ -0.49
CRTC3-209ENST00000560320 GAS2L3Q86XJ1 694 aa12.02□□□□□ -0.49
CRTC3-209ENST00000560320 ELOA2Q8IYF1 753 aaPredicted RBP12.02□□□□□ -0.49
CRTC3-209ENST00000560320 SYMPKQ92797 1274 aaKnown RBP12.02□□□□□ -0.49
CRTC3-209ENST00000560320 AK8Q96MA6 479 aa12.02□□□□□ -0.49
CRTC3-209ENST00000560320 BEGAINQ9BUH8 593 aa12.02□□□□□ -0.49
CRTC3-209ENST00000560320 ELP3Q9H9T3 547 aa12.02□□□□□ -0.49
CRTC3-209ENST00000560320 SLC38A10Q9HBR0 1119 aa12.02□□□□□ -0.49
CRTC3-209ENST00000560320 HOXC10Q9NYD6 342 aa12.02□□□□□ -0.49
CRTC3-209ENST00000560320 RABGAP1Q9Y3P9 1069 aa12.02□□□□□ -0.49
CRTC3-209ENST00000560320 MRVI1Q9Y6F6 885 aa12.02□□□□□ -0.49
CRTC3-209ENST00000560320 LOC285556D6RIA3 1793 aa12.02□□□□□ -0.49
CRTC3-209ENST00000560320 CXCL11O14625 94 aa12.01□□□□□ -0.49
CRTC3-209ENST00000560320 MEIS2O14770 477 aa12.01□□□□□ -0.49
CRTC3-209ENST00000560320 ITGBL1O95965 494 aaPredicted RBP12.01□□□□□ -0.49
CRTC3-209ENST00000560320 ALAS1P13196 640 aa12.01□□□□□ -0.49
CRTC3-209ENST00000560320 DSG3P32926 999 aa12.01□□□□□ -0.49
CRTC3-209ENST00000560320 UBA7P41226 1012 aa12.01□□□□□ -0.49
CRTC3-209ENST00000560320 DGKZQ13574 1117 aa12.01□□□□□ -0.49
CRTC3-209ENST00000560320 KRBA2Q6ZNG9 492 aa12.01□□□□□ -0.49
CRTC3-209ENST00000560320 GADL1Q6ZQY3 521 aa12.01□□□□□ -0.49
CRTC3-209ENST00000560320 FCHSD1Q86WN1 690 aa12.01□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms