RNA–Protein interactions for RNA: ENST00000559734.1

TRAF3-207, Transcript of TNF receptor associated factor 3, humanhuman

TSL 3

Gene TRAF3, Length 870 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3-207ENST00000559734 NOD1Q9Y239 953 aa12.84□□□□□ -0.35
TRAF3-207ENST00000559734 Q9Y3F1 56 aa12.84□□□□□ -0.35
TRAF3-207ENST00000559734 BDP1A6H8Y1 2624 aa12.84□□□□□ -0.35
TRAF3-207ENST00000559734 ZNF536O15090 1300 aa12.84□□□□□ -0.35
TRAF3-207ENST00000559734 COL4A4P53420 1690 aaPredicted RBP12.83□□□□□ -0.35
TRAF3-207ENST00000559734 SCN5AQ14524 2016 aa12.83□□□□□ -0.36
TRAF3-207ENST00000559734 LCHNA4D1U4 455 aa12.83□□□□□ -0.36
TRAF3-207ENST00000559734 GSG1L2A8MUP6 293 aa12.83□□□□□ -0.36
TRAF3-207ENST00000559734 PI4K2BG5E9Z4 385 aa12.83□□□□□ -0.36
TRAF3-207ENST00000559734 CCER2I3L3R5 266 aa12.83□□□□□ -0.36
TRAF3-207ENST00000559734 LPXNO60711 386 aa12.83□□□□□ -0.36
TRAF3-207ENST00000559734 APPP05067 770 aa12.83□□□□□ -0.36
TRAF3-207ENST00000559734 IQCF3P0C7M6 154 aa12.83□□□□□ -0.36
TRAF3-207ENST00000559734 TSPY3P0CV98 308 aa12.83□□□□□ -0.36
TRAF3-207ENST00000559734 TSPY8P0CW00 308 aa12.83□□□□□ -0.36
TRAF3-207ENST00000559734 FDX1P10109 184 aa12.83□□□□□ -0.36
TRAF3-207ENST00000559734 SLC1A4P43007 532 aa12.83□□□□□ -0.36
TRAF3-207ENST00000559734 CPT1AP50416 773 aa12.83□□□□□ -0.36
TRAF3-207ENST00000559734 PURAQ00577 322 aaKnown RBP12.83□□□□□ -0.36
TRAF3-207ENST00000559734 NBPF20Q3BBV1 942 aa12.83□□□□□ -0.36
TRAF3-207ENST00000559734 TKFCQ3LXA3 575 aa12.83□□□□□ -0.36
TRAF3-207ENST00000559734 TMCO2Q7Z6W1 182 aaPredicted RBP12.83□□□□□ -0.36
TRAF3-207ENST00000559734 RPAP2Q8IXW5 612 aaPredicted RBP12.83□□□□□ -0.36
TRAF3-207ENST00000559734 CHURC1Q8WUH1 139 aa12.83□□□□□ -0.36
TRAF3-207ENST00000559734 MKL1Q969V6 931 aa12.83□□□□□ -0.36
TRAF3-207ENST00000559734 STRBPQ96SI9 672 aaKnown RBP12.83□□□□□ -0.36
TRAF3-207ENST00000559734 WDR11Q9BZH6 1224 aa12.83□□□□□ -0.36
TRAF3-207ENST00000559734 ZNF287Q9HBT7 754 aa12.83□□□□□ -0.36
TRAF3-207ENST00000559734 CYP39A1Q9NYL5 469 aa12.83□□□□□ -0.36
TRAF3-207ENST00000559734 CCPG1Q9ULG6 757 aa12.83□□□□□ -0.36
TRAF3-207ENST00000559734 MYH4Q9Y623 1939 aa12.83□□□□□ -0.36
TRAF3-207ENST00000559734 XIRP2A4UGR9 3374 aa12.83□□□□□ -0.36
TRAF3-207ENST00000559734 CHD7Q9P2D1 2997 aa12.82□□□□□ -0.36
TRAF3-207ENST00000559734 HMMRO75330 724 aa12.82□□□□□ -0.36
TRAF3-207ENST00000559734 ATXN8OSP0DMR3 200 aa12.82□□□□□ -0.36
TRAF3-207ENST00000559734 MCCP23508 829 aa12.82□□□□□ -0.36
TRAF3-207ENST00000559734 CSPP1Q1MSJ5 1256 aa12.82□□□□□ -0.36
TRAF3-207ENST00000559734 DUSP28Q4G0W2 176 aa12.82□□□□□ -0.36
TRAF3-207ENST00000559734 KCTD1Q719H9 257 aa12.82□□□□□ -0.36
TRAF3-207ENST00000559734 STAG1Q8WVM7 1258 aa12.82□□□□□ -0.36
TRAF3-207ENST00000559734 CRBNQ96SW2 442 aa12.82□□□□□ -0.36
TRAF3-207ENST00000559734 PRR33A8MZF0 331 aa12.81□□□□□ -0.36
TRAF3-207ENST00000559734 RAB11FIP3O75154 756 aa12.81□□□□□ -0.36
TRAF3-207ENST00000559734 KCNA5P22460 613 aa12.81□□□□□ -0.36
TRAF3-207ENST00000559734 MRE11P49959 708 aa12.81□□□□□ -0.36
TRAF3-207ENST00000559734 BFSP2Q13515 415 aa12.81□□□□□ -0.36
TRAF3-207ENST00000559734 BRDTQ58F21 947 aaPredicted RBP12.81□□□□□ -0.36
TRAF3-207ENST00000559734 GJD3Q8N144 294 aa12.81□□□□□ -0.36
TRAF3-207ENST00000559734 UBE2ZQ9H832 354 aaPredicted RBP12.81□□□□□ -0.36
TRAF3-207ENST00000559734 EPB41L4AQ9HCS5 686 aaPredicted RBP12.81□□□□□ -0.36
TRAF3-207ENST00000559734 SYNPO2Q9UMS6 1093 aa12.81□□□□□ -0.36
TRAF3-207ENST00000559734 MYH7P12883 1935 aa12.8□□□□□ -0.36
TRAF3-207ENST00000559734 PTPDC1A2A3K4 754 aa12.8□□□□□ -0.36
TRAF3-207ENST00000559734 PITPNM1O00562 1244 aa12.8□□□□□ -0.36
TRAF3-207ENST00000559734 BAIAP3O94812 1187 aa12.8□□□□□ -0.36
TRAF3-207ENST00000559734 IL9P15248 144 aa12.8□□□□□ -0.36
TRAF3-207ENST00000559734 ALDH5A1P51649 535 aaPredicted RBP12.8□□□□□ -0.36
TRAF3-207ENST00000559734 WDR5P61964 334 aaKnown RBP12.8□□□□□ -0.36
TRAF3-207ENST00000559734 DEFB103AP81534 67 aa12.8□□□□□ -0.36
TRAF3-207ENST00000559734 TFAP4Q01664 338 aa12.8□□□□□ -0.36
TRAF3-207ENST00000559734 BAATQ14032 418 aaPredicted RBP12.8□□□□□ -0.36
TRAF3-207ENST00000559734 PPP2R5BQ15173 497 aa12.8□□□□□ -0.36
TRAF3-207ENST00000559734 CCDC96Q2M329 555 aa12.8□□□□□ -0.36
TRAF3-207ENST00000559734 GIMAP6Q6P9H5 292 aa12.8□□□□□ -0.36
TRAF3-207ENST00000559734 RASGRP2Q7LDG7 609 aa12.8□□□□□ -0.36
TRAF3-207ENST00000559734 APPBP2Q92624 585 aa12.8□□□□□ -0.36
TRAF3-207ENST00000559734 OSBP2Q969R2 916 aa12.8□□□□□ -0.36
TRAF3-207ENST00000559734 ADD3Q9UEY8 706 aaKnown RBP12.8□□□□□ -0.36
TRAF3-207ENST00000559734 PRR12Q9ULL5 1215 aa12.8□□□□□ -0.36
TRAF3-207ENST00000559734 STX8Q9UNK0 236 aa12.8□□□□□ -0.36
TRAF3-207ENST00000559734 RAD50Q92878 1312 aa12.8□□□□□ -0.36
TRAF3-207ENST00000559734 TANC1Q9C0D5 1861 aa12.79□□□□□ -0.36
TRAF3-207ENST00000559734 GPAA1O43292 621 aa12.79□□□□□ -0.36
TRAF3-207ENST00000559734 CALML3P27482 149 aa12.79□□□□□ -0.36
TRAF3-207ENST00000559734 FAM117BQ6P1L5 589 aa12.79□□□□□ -0.36
TRAF3-207ENST00000559734 NFRKBQ6P4R8 1299 aa12.79□□□□□ -0.36
TRAF3-207ENST00000559734 NEDD1Q8NHV4 660 aa12.79□□□□□ -0.36
TRAF3-207ENST00000559734 COPS5Q92905 334 aa12.79□□□□□ -0.36
TRAF3-207ENST00000559734 GMCL1Q96IK5 515 aa12.79□□□□□ -0.36
TRAF3-207ENST00000559734 SUGCTQ9HAC7 445 aa12.79□□□□□ -0.36
TRAF3-207ENST00000559734 REV3LO60673 3130 aa12.78□□□□□ -0.36
TRAF3-207ENST00000559734 M0R2C6 588 aa12.78□□□□□ -0.36
TRAF3-207ENST00000559734 NFIBO00712 420 aa12.78□□□□□ -0.36
TRAF3-207ENST00000559734 SMARCA5O60264 1052 aaPredicted RBP12.78□□□□□ -0.36
TRAF3-207ENST00000559734 SLC3A2P08195 630 aaKnown RBP12.78□□□□□ -0.36
TRAF3-207ENST00000559734 ALADP13716 330 aa12.78□□□□□ -0.36
TRAF3-207ENST00000559734 PDE4BQ07343 736 aa12.78□□□□□ -0.36
TRAF3-207ENST00000559734 PDE4DQ08499 809 aa12.78□□□□□ -0.36
TRAF3-207ENST00000559734 PTGISQ16647 500 aa12.78□□□□□ -0.36
TRAF3-207ENST00000559734 LEXMQ3ZCV2 418 aa12.78□□□□□ -0.36
TRAF3-207ENST00000559734 PTCRAQ6ISU1 281 aaPredicted RBP12.78□□□□□ -0.36
TRAF3-207ENST00000559734 EP400NLQ6ZTU2 488 aa12.78□□□□□ -0.36
TRAF3-207ENST00000559734 SIRT2Q8IXJ6 389 aa12.78□□□□□ -0.36
TRAF3-207ENST00000559734 FAM178BQ8IXR5 827 aa12.78□□□□□ -0.36
TRAF3-207ENST00000559734 CCDC155Q8N6L0 562 aa12.78□□□□□ -0.36
TRAF3-207ENST00000559734 MORC4Q8TE76 937 aa12.78□□□□□ -0.36
TRAF3-207ENST00000559734 LMCD1Q9NZU5 365 aa12.78□□□□□ -0.36
TRAF3-207ENST00000559734 PLIN4Q96Q06 1357 aa12.78□□□□□ -0.36
TRAF3-207ENST00000559734 RBAK-RBAKDNI3L0D1 243 aa12.77□□□□□ -0.37
TRAF3-207ENST00000559734 ICAM1P05362 532 aa12.77□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms