RNA–Protein interactions for RNA: ENST00000559433.5

LRRC28-214, Transcript of leucine rich repeat containing 28, humanhuman

TSL 5

Gene LRRC28, Length 1,045 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-214ENST00000559433 VTA1Q9NP79 307 aa14.65□□□□□ -0.06
LRRC28-214ENST00000559433 LOC102724159A0A0B4J2E5 919 aa14.64□□□□□ -0.07
LRRC28-214ENST00000559433 A0A1W2PQ45 241 aaPredicted RBP14.64□□□□□ -0.07
LRRC28-214ENST00000559433 A0A1W2PQY0 241 aa14.64□□□□□ -0.07
LRRC28-214ENST00000559433 MYADML2A6NDP7 307 aa14.64□□□□□ -0.07
LRRC28-214ENST00000559433 BMP8BP34820 402 aa14.64□□□□□ -0.07
LRRC28-214ENST00000559433 MAGEA10P43363 369 aaPredicted RBP14.64□□□□□ -0.07
LRRC28-214ENST00000559433 ACLYP53396 1101 aa14.64□□□□□ -0.07
LRRC28-214ENST00000559433 TROAPQ12815 778 aa14.64□□□□□ -0.07
LRRC28-214ENST00000559433 PWP2Q15269 919 aaKnown RBP14.64□□□□□ -0.07
LRRC28-214ENST00000559433 TRIM60Q495X7 471 aa14.64□□□□□ -0.07
LRRC28-214ENST00000559433 NFXL1Q6ZNB6 911 aa14.64□□□□□ -0.07
LRRC28-214ENST00000559433 ZNF654Q8IZM8 581 aa14.64□□□□□ -0.07
LRRC28-214ENST00000559433 PCSK9Q8NBP7 692 aaKnown RBP14.64□□□□□ -0.07
LRRC28-214ENST00000559433 RGS22Q8NE09 1264 aa14.64□□□□□ -0.07
LRRC28-214ENST00000559433 KLHDC9Q8NEP7 349 aa14.64□□□□□ -0.07
LRRC28-214ENST00000559433 AMNQ9BXJ7 453 aa14.64□□□□□ -0.07
LRRC28-214ENST00000559433 AP5M1Q9H0R1 490 aa14.64□□□□□ -0.07
LRRC28-214ENST00000559433 UPF3AQ9H1J1 476 aaKnown RBP14.64□□□□□ -0.07
LRRC28-214ENST00000559433 PRDM5Q9NQX1 630 aaPredicted RBP14.64□□□□□ -0.07
LRRC28-214ENST00000559433 GPHNQ9NQX3 736 aaPredicted RBP14.64□□□□□ -0.07
LRRC28-214ENST00000559433 MRPL11Q9Y3B7 192 aaKnown RBP14.64□□□□□ -0.07
LRRC28-214ENST00000559433 RANBP2P49792 3224 aaKnown RBP14.64□□□□□ -0.07
LRRC28-214ENST00000559433 MOXD2PA6NHM9 499 aa14.63□□□□□ -0.07
LRRC28-214ENST00000559433 ZBTB5O15062 677 aa14.63□□□□□ -0.07
LRRC28-214ENST00000559433 DDAH1O94760 285 aa14.63□□□□□ -0.07
LRRC28-214ENST00000559433 CST5P28325 142 aaPredicted RBP14.63□□□□□ -0.07
LRRC28-214ENST00000559433 FXR1P51114 621 aaKnown RBP eCLIP14.63□□□□□ -0.07
LRRC28-214ENST00000559433 GJA9P57773 515 aa14.63□□□□□ -0.07
LRRC28-214ENST00000559433 MDM2Q00987 491 aaPredicted RBP14.63□□□□□ -0.07
LRRC28-214ENST00000559433 PDE4DQ08499 809 aa14.63□□□□□ -0.07
LRRC28-214ENST00000559433 SNX17Q15036 470 aa14.63□□□□□ -0.07
LRRC28-214ENST00000559433 KCNA10Q16322 511 aa14.63□□□□□ -0.07
LRRC28-214ENST00000559433 GNASQ5JWF2 1037 aa14.63□□□□□ -0.07
LRRC28-214ENST00000559433 TAPT1Q6NXT6 567 aa14.63□□□□□ -0.07
LRRC28-214ENST00000559433 TLK2Q86UE8 772 aa14.63□□□□□ -0.07
LRRC28-214ENST00000559433 HOMER1Q86YM7 354 aa14.63□□□□□ -0.07
LRRC28-214ENST00000559433 MCF2L2Q86YR7 1114 aa14.63□□□□□ -0.07
LRRC28-214ENST00000559433 DNERQ8NFT8 737 aa14.63□□□□□ -0.07
LRRC28-214ENST00000559433 TMEM87BQ96K49 555 aa14.63□□□□□ -0.07
LRRC28-214ENST00000559433 GDF15Q99988 308 aa14.63□□□□□ -0.07
LRRC28-214ENST00000559433 MTA3Q9BTC8 594 aa14.63□□□□□ -0.07
LRRC28-214ENST00000559433 MYL10Q9BUA6 226 aa14.63□□□□□ -0.07
LRRC28-214ENST00000559433 PRO3102Q9H379 93 aa14.63□□□□□ -0.07
LRRC28-214ENST00000559433 PDGFCQ9NRA1 345 aa14.63□□□□□ -0.07
LRRC28-214ENST00000559433 KIAA1217Q5T5P2 1943 aa14.62□□□□□ -0.07
LRRC28-214ENST00000559433 CCDC69A6NI79 296 aa14.62□□□□□ -0.07
LRRC28-214ENST00000559433 SH2B2O14492 632 aaPredicted RBP14.62□□□□□ -0.07
LRRC28-214ENST00000559433 ZEB2O60315 1214 aa14.62□□□□□ -0.07
LRRC28-214ENST00000559433 SMPD1P17405 629 aa14.62□□□□□ -0.07
LRRC28-214ENST00000559433 IRX5P78411 483 aaPredicted RBP14.62□□□□□ -0.07
LRRC28-214ENST00000559433 COL9A3Q14050 684 aaPredicted RBP14.62□□□□□ -0.07
LRRC28-214ENST00000559433 IQSEC1Q6DN90 963 aa14.62□□□□□ -0.07
LRRC28-214ENST00000559433 CCSAPQ6IQ19 270 aaPredicted RBP14.62□□□□□ -0.07
LRRC28-214ENST00000559433 CTCFLQ8NI51 663 aaPredicted RBP14.62□□□□□ -0.07
LRRC28-214ENST00000559433 MTMR8Q96EF0 704 aa14.62□□□□□ -0.07
LRRC28-214ENST00000559433 GLT1D1Q96MS3 346 aa14.62□□□□□ -0.07
LRRC28-214ENST00000559433 MAF1Q9H063 256 aa14.62□□□□□ -0.07
LRRC28-214ENST00000559433 STARD7Q9NQZ5 370 aa14.62□□□□□ -0.07
LRRC28-214ENST00000559433 PCDH10Q9P2E7 1040 aa14.62□□□□□ -0.07
LRRC28-214ENST00000559433 GNEQ9Y223 722 aaKnown RBP14.62□□□□□ -0.07
LRRC28-214ENST00000559433 DCDC2CA8MYV0 355 aa14.61□□□□□ -0.07
LRRC28-214ENST00000559433 DYNC1LI2O43237 492 aaPredicted RBP14.61□□□□□ -0.07
LRRC28-214ENST00000559433 PPP1R11O60927 126 aaPredicted RBP14.61□□□□□ -0.07
LRRC28-214ENST00000559433 CENPBP07199 599 aaPredicted RBP14.61□□□□□ -0.07
LRRC28-214ENST00000559433 ASGR1P07306 291 aa14.61□□□□□ -0.07
LRRC28-214ENST00000559433 PTGS1P23219 599 aa14.61□□□□□ -0.07
LRRC28-214ENST00000559433 BEX3Q00994 111 aa14.61□□□□□ -0.07
LRRC28-214ENST00000559433 SLC35G1Q2M3R5 365 aa14.61□□□□□ -0.07
LRRC28-214ENST00000559433 C1orf53Q5VUE5 145 aa14.61□□□□□ -0.07
LRRC28-214ENST00000559433 TMTC2Q8N394 836 aa14.61□□□□□ -0.07
LRRC28-214ENST00000559433 SYTL5Q8TDW5 730 aaPredicted RBP14.61□□□□□ -0.07
LRRC28-214ENST00000559433 TBC1D5Q92609 795 aa14.61□□□□□ -0.07
LRRC28-214ENST00000559433 PIGSQ96S52 555 aa14.61□□□□□ -0.07
LRRC28-214ENST00000559433 LRRC2Q9BYS8 371 aa14.61□□□□□ -0.07
LRRC28-214ENST00000559433 RNF39Q9H2S5 420 aa14.61□□□□□ -0.07
LRRC28-214ENST00000559433 RIOX1Q9H6W3 641 aa14.61□□□□□ -0.07
LRRC28-214ENST00000559433 PCDHA1Q9Y5I3 950 aa14.61□□□□□ -0.07
LRRC28-214ENST00000559433 CTAGE5O15320 804 aa14.6□□□□□ -0.07
LRRC28-214ENST00000559433 CYTH3O43739 400 aa14.6□□□□□ -0.07
LRRC28-214ENST00000559433 PQBP1O60828 265 aaKnown RBP14.6□□□□□ -0.07
LRRC28-214ENST00000559433 CFBP00751 764 aa14.6□□□□□ -0.07
LRRC28-214ENST00000559433 EDNRBP24530 442 aa14.6□□□□□ -0.07
LRRC28-214ENST00000559433 KIF5BP33176 963 aa14.6□□□□□ -0.07
LRRC28-214ENST00000559433 TLE2Q04725 743 aa14.6□□□□□ -0.07
LRRC28-214ENST00000559433 TRAF1Q13077 416 aa14.6□□□□□ -0.07
LRRC28-214ENST00000559433 FSCN1Q16658 493 aaKnown RBP14.6□□□□□ -0.07
LRRC28-214ENST00000559433 NSUN6Q8TEA1 469 aaKnown RBP14.6□□□□□ -0.07
LRRC28-214ENST00000559433 PIBF1Q8WXW3 757 aa14.6□□□□□ -0.07
LRRC28-214ENST00000559433 TAAR1Q96RJ0 339 aa14.6□□□□□ -0.07
LRRC28-214ENST00000559433 MAP3K14Q99558 947 aa14.6□□□□□ -0.07
LRRC28-214ENST00000559433 WDR11Q9BZH6 1224 aa14.6□□□□□ -0.07
LRRC28-214ENST00000559433 PPP4R2Q9NY27 417 aa14.6□□□□□ -0.07
LRRC28-214ENST00000559433 COL20A1Q9P218 1284 aa14.6□□□□□ -0.07
LRRC28-214ENST00000559433 PNMA6FA0A0J9YX94 578 aa14.59□□□□□ -0.07
LRRC28-214ENST00000559433 OPLAHO14841 1288 aa14.59□□□□□ -0.07
LRRC28-214ENST00000559433 CALM1P0DP23 149 aa14.59□□□□□ -0.07
LRRC28-214ENST00000559433 CALM2P0DP24 149 aa14.59□□□□□ -0.07
LRRC28-214ENST00000559433 CALM3P0DP25 149 aa14.59□□□□□ -0.07
LRRC28-214ENST00000559433 RXRAP19793 462 aa14.59□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 66.9 ms