RNA–Protein interactions for RNA: ENST00000559401.1

SNX1-207, Transcript of sorting nexin 1, humanhuman

TSL 2

Gene SNX1, Length 408 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-207ENST00000559401 SH2B2O14492 632 aaPredicted RBP9.51□□□□□ -0.89
SNX1-207ENST00000559401 ZBTB5O15062 677 aa9.51□□□□□ -0.89
SNX1-207ENST00000559401 ADCY6O43306 1168 aa9.51□□□□□ -0.89
SNX1-207ENST00000559401 DDAH1O94760 285 aa9.51□□□□□ -0.89
SNX1-207ENST00000559401 RXRAP19793 462 aa9.51□□□□□ -0.89
SNX1-207ENST00000559401 KIF5BP33176 963 aa9.51□□□□□ -0.89
SNX1-207ENST00000559401 ACLYP53396 1101 aa9.51□□□□□ -0.89
SNX1-207ENST00000559401 IRX5P78411 483 aaPredicted RBP9.51□□□□□ -0.89
SNX1-207ENST00000559401 FGD1P98174 961 aa9.51□□□□□ -0.89
SNX1-207ENST00000559401 BEX3Q00994 111 aa9.51□□□□□ -0.89
SNX1-207ENST00000559401 TROAPQ12815 778 aa9.51□□□□□ -0.89
SNX1-207ENST00000559401 KCNA10Q16322 511 aa9.51□□□□□ -0.89
SNX1-207ENST00000559401 TRIM60Q495X7 471 aa9.51□□□□□ -0.89
SNX1-207ENST00000559401 GNASQ5JWF2 1037 aa9.51□□□□□ -0.89
SNX1-207ENST00000559401 TLK2Q86UE8 772 aa9.51□□□□□ -0.89
SNX1-207ENST00000559401 PCSK9Q8NBP7 692 aaKnown RBP9.51□□□□□ -0.89
SNX1-207ENST00000559401 IGDCC4Q8TDY8 1250 aa9.51□□□□□ -0.89
SNX1-207ENST00000559401 GLT1D1Q96MS3 346 aa9.51□□□□□ -0.89
SNX1-207ENST00000559401 PIGSQ96S52 555 aa9.51□□□□□ -0.89
SNX1-207ENST00000559401 MTA3Q9BTC8 594 aa9.51□□□□□ -0.89
SNX1-207ENST00000559401 KATNBL1Q9H079 304 aa9.51□□□□□ -0.89
SNX1-207ENST00000559401 LY9Q9HBG7 655 aa9.51□□□□□ -0.89
SNX1-207ENST00000559401 STARD7Q9NQZ5 370 aa9.51□□□□□ -0.89
SNX1-207ENST00000559401 PDGFCQ9NRA1 345 aa9.51□□□□□ -0.89
SNX1-207ENST00000559401 PCDH10Q9P2E7 1040 aa9.51□□□□□ -0.89
SNX1-207ENST00000559401 RBM27Q9P2N5 1060 aaKnown RBP9.51□□□□□ -0.89
SNX1-207ENST00000559401 PCDHA1Q9Y5I3 950 aa9.51□□□□□ -0.89
SNX1-207ENST00000559401 LOC102724159A0A0B4J2E5 919 aa9.5□□□□□ -0.89
SNX1-207ENST00000559401 MOXD2PA6NHM9 499 aa9.5□□□□□ -0.89
SNX1-207ENST00000559401 DYNC1LI2O43237 492 aaPredicted RBP9.5□□□□□ -0.89
SNX1-207ENST00000559401 PQBP1O60828 265 aaKnown RBP9.5□□□□□ -0.89
SNX1-207ENST00000559401 ASGR1P07306 291 aa9.5□□□□□ -0.89
SNX1-207ENST00000559401 CALM1P0DP23 149 aa9.5□□□□□ -0.89
SNX1-207ENST00000559401 CALM2P0DP24 149 aa9.5□□□□□ -0.89
SNX1-207ENST00000559401 CALM3P0DP25 149 aa9.5□□□□□ -0.89
SNX1-207ENST00000559401 EIF2AK2P19525 551 aaKnown RBP9.5□□□□□ -0.89
SNX1-207ENST00000559401 MAGEA10P43363 369 aaPredicted RBP9.5□□□□□ -0.89
SNX1-207ENST00000559401 GJA9P57773 515 aa9.5□□□□□ -0.89
SNX1-207ENST00000559401 MDM2Q00987 491 aaPredicted RBP9.5□□□□□ -0.89
SNX1-207ENST00000559401 TRAF1Q13077 416 aa9.5□□□□□ -0.89
SNX1-207ENST00000559401 KRT32Q14532 448 aa9.5□□□□□ -0.89
SNX1-207ENST00000559401 PWP2Q15269 919 aaKnown RBP9.5□□□□□ -0.89
SNX1-207ENST00000559401 ARHGEF16Q5VV41 709 aa9.5□□□□□ -0.89
SNX1-207ENST00000559401 IQSEC1Q6DN90 963 aa9.5□□□□□ -0.89
SNX1-207ENST00000559401 SYNE3Q6ZMZ3 975 aa9.5□□□□□ -0.89
SNX1-207ENST00000559401 MICU3Q86XE3 530 aa9.5□□□□□ -0.89
SNX1-207ENST00000559401 TMTC2Q8N394 836 aa9.5□□□□□ -0.89
SNX1-207ENST00000559401 DNERQ8NFT8 737 aa9.5□□□□□ -0.89
SNX1-207ENST00000559401 TBC1D5Q92609 795 aa9.5□□□□□ -0.89
SNX1-207ENST00000559401 TCEANC2Q96MN5 208 aa9.5□□□□□ -0.89
SNX1-207ENST00000559401 NEK1Q96PY6 1258 aa9.5□□□□□ -0.89
SNX1-207ENST00000559401 LBHD1Q9BQE6 289 aaPredicted RBP9.5□□□□□ -0.89
SNX1-207ENST00000559401 TSEN34Q9BSV6 310 aaKnown RBP9.5□□□□□ -0.89
SNX1-207ENST00000559401 UPF3AQ9H1J1 476 aaKnown RBP9.5□□□□□ -0.89
SNX1-207ENST00000559401 SEC63Q9UGP8 760 aaKnown RBP9.5□□□□□ -0.89
SNX1-207ENST00000559401 NAP1L2Q9ULW6 460 aaPredicted RBP9.5□□□□□ -0.89
SNX1-207ENST00000559401 SLC12A7Q9Y666 1083 aa9.5□□□□□ -0.89
SNX1-207ENST00000559401 LTBP2Q14767 1821 aa9.49□□□□□ -0.89
SNX1-207ENST00000559401 PNMA6FA0A0J9YX94 578 aa9.49□□□□□ -0.89
SNX1-207ENST00000559401 PPP1R11O60927 126 aaPredicted RBP9.49□□□□□ -0.89
SNX1-207ENST00000559401 REC8O95072 547 aa9.49□□□□□ -0.89
SNX1-207ENST00000559401 SMPD1P17405 629 aa9.49□□□□□ -0.89
SNX1-207ENST00000559401 PTGS1P23219 599 aa9.49□□□□□ -0.89
SNX1-207ENST00000559401 CST5P28325 142 aaPredicted RBP9.49□□□□□ -0.89
SNX1-207ENST00000559401 LIFRP42702 1097 aa9.49□□□□□ -0.89
SNX1-207ENST00000559401 TLE2Q04725 743 aa9.49□□□□□ -0.89
SNX1-207ENST00000559401 COL9A3Q14050 684 aaPredicted RBP9.49□□□□□ -0.89
SNX1-207ENST00000559401 PPP2R5BQ15173 497 aa9.49□□□□□ -0.89
SNX1-207ENST00000559401 TAPT1Q6NXT6 567 aa9.49□□□□□ -0.89
SNX1-207ENST00000559401 RASEFQ8IZ41 740 aa9.49□□□□□ -0.89
SNX1-207ENST00000559401 RGS22Q8NE09 1264 aa9.49□□□□□ -0.89
SNX1-207ENST00000559401 KLHDC9Q8NEP7 349 aa9.49□□□□□ -0.89
SNX1-207ENST00000559401 OR6J1Q8NGC5 347 aa9.49□□□□□ -0.89
SNX1-207ENST00000559401 SYTL5Q8TDW5 730 aaPredicted RBP9.49□□□□□ -0.89
SNX1-207ENST00000559401 MORC4Q8TE76 937 aa9.49□□□□□ -0.89
SNX1-207ENST00000559401 NSUN6Q8TEA1 469 aaKnown RBP9.49□□□□□ -0.89
SNX1-207ENST00000559401 MTMR8Q96EF0 704 aa9.49□□□□□ -0.89
SNX1-207ENST00000559401 RRP36Q96EU6 259 aaKnown RBP9.49□□□□□ -0.89
SNX1-207ENST00000559401 TAAR1Q96RJ0 339 aa9.49□□□□□ -0.89
SNX1-207ENST00000559401 RMDN3Q96TC7 470 aa9.49□□□□□ -0.89
SNX1-207ENST00000559401 WDR11Q9BZH6 1224 aa9.49□□□□□ -0.89
SNX1-207ENST00000559401 UBE2OQ9C0C9 1292 aaKnown RBP9.49□□□□□ -0.89
SNX1-207ENST00000559401 RIOX1Q9H6W3 641 aa9.49□□□□□ -0.89
SNX1-207ENST00000559401 KIAA1217Q5T5P2 1943 aa9.48□□□□□ -0.89
SNX1-207ENST00000559401 DCDC2CA8MYV0 355 aa9.48□□□□□ -0.89
SNX1-207ENST00000559401 CYTH3O43739 400 aa9.48□□□□□ -0.89
SNX1-207ENST00000559401 ZEB2O60315 1214 aa9.48□□□□□ -0.89
SNX1-207ENST00000559401 PLEKHA8P1O95397 391 aa9.48□□□□□ -0.89
SNX1-207ENST00000559401 MYCLP12524 364 aaPredicted RBP9.48□□□□□ -0.89
SNX1-207ENST00000559401 HOXA13P31271 388 aaPredicted RBP9.48□□□□□ -0.89
SNX1-207ENST00000559401 GNAQP50148 359 aa9.48□□□□□ -0.89
SNX1-207ENST00000559401 SNX17Q15036 470 aa9.48□□□□□ -0.89
SNX1-207ENST00000559401 FSCN1Q16658 493 aaKnown RBP9.48□□□□□ -0.89
SNX1-207ENST00000559401 SLC35G1Q2M3R5 365 aa9.48□□□□□ -0.89
SNX1-207ENST00000559401 ADCK5Q3MIX3 580 aa9.48□□□□□ -0.89
SNX1-207ENST00000559401 DUSP28Q4G0W2 176 aa9.48□□□□□ -0.89
SNX1-207ENST00000559401 TMEM63BQ5T3F8 832 aa9.48□□□□□ -0.89
SNX1-207ENST00000559401 ERICH6BQ5W0A0 696 aa9.48□□□□□ -0.89
SNX1-207ENST00000559401 CXCL17Q6UXB2 119 aa9.48□□□□□ -0.89
SNX1-207ENST00000559401 DHX32Q7L7V1 743 aaKnown RBP9.48□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 117.3 ms