RNA–Protein interactions for RNA: ENST00000559201.5

LRRC49-215, Transcript of leucine rich repeat containing 49, human

TSL 3

Gene LRRC49, Length 938 nt, Biotype nonsense mediated decay.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LRRC49-215	ENST00000559201	CAP2	P40123	477 aa		12.07	□□□□□ -0.48
LRRC49-215	ENST00000559201	IK	Q13123	557 aa	Predicted RBP	12.07	□□□□□ -0.48
LRRC49-215	ENST00000559201	TPD52L1	Q16890	204 aa	Predicted RBP	12.07	□□□□□ -0.48
LRRC49-215	ENST00000559201	COBLL1	Q53SF7	1204 aa		12.07	□□□□□ -0.48
LRRC49-215	ENST00000559201	CNNM4	Q6P4Q7	775 aa		12.07	□□□□□ -0.48
LRRC49-215	ENST00000559201	SV2B	Q7L1I2	683 aa		12.07	□□□□□ -0.48
LRRC49-215	ENST00000559201	GRAMD1C	Q8IYS0	662 aa		12.07	□□□□□ -0.48
LRRC49-215	ENST00000559201	CDK5RAP3	Q96JB5	506 aa		12.07	□□□□□ -0.48
LRRC49-215	ENST00000559201	MBOAT7	Q96N66	472 aa		12.07	□□□□□ -0.48
LRRC49-215	ENST00000559201	ZNF830	Q96NB3	372 aa	Predicted RBP	12.07	□□□□□ -0.48
LRRC49-215	ENST00000559201	KCNF1	Q9H3M0	494 aa		12.07	□□□□□ -0.48
LRRC49-215	ENST00000559201	EHMT1	Q9H9B1	1298 aa		12.07	□□□□□ -0.48
LRRC49-215	ENST00000559201	VEZT	Q9HBM0	779 aa		12.07	□□□□□ -0.48
LRRC49-215	ENST00000559201	TMEM260	Q9NX78	707 aa		12.07	□□□□□ -0.48
LRRC49-215	ENST00000559201	DDX25	Q9UHL0	483 aa	Known RBP	12.07	□□□□□ -0.48
LRRC49-215	ENST00000559201	FEM1B	Q9UK73	627 aa		12.07	□□□□□ -0.48
LRRC49-215	ENST00000559201	ZBTB21	Q9ULJ3	1066 aa		12.07	□□□□□ -0.48
LRRC49-215	ENST00000559201	MYH6	P13533	1939 aa		12.07	□□□□□ -0.48
LRRC49-215	ENST00000559201	CNTNAP1	P78357	1384 aa		12.06	□□□□□ -0.48
LRRC49-215	ENST00000559201	PVALEF	A0A1B0GWK0	134 aa		12.06	□□□□□ -0.48
LRRC49-215	ENST00000559201	CLRN2	A0PK11	232 aa		12.06	□□□□□ -0.48
LRRC49-215	ENST00000559201	SPDYE3	A6NKU9	549 aa		12.06	□□□□□ -0.48
LRRC49-215	ENST00000559201	PPP1R11	O60927	126 aa	Predicted RBP	12.06	□□□□□ -0.48
LRRC49-215	ENST00000559201	RHOBTB3	O94955	611 aa		12.06	□□□□□ -0.48
LRRC49-215	ENST00000559201	ZBTB7A	O95365	584 aa		12.06	□□□□□ -0.48
LRRC49-215	ENST00000559201	SFPQ	P23246	707 aa	Known RBP eCLIP	12.06	□□□□□ -0.48
LRRC49-215	ENST00000559201	TEC	P42680	631 aa		12.06	□□□□□ -0.48
LRRC49-215	ENST00000559201	TXK	P42681	527 aa		12.06	□□□□□ -0.48
LRRC49-215	ENST00000559201	STAT2	P52630	851 aa		12.06	□□□□□ -0.48
LRRC49-215	ENST00000559201	CUL4B	Q13620	913 aa		12.06	□□□□□ -0.48
LRRC49-215	ENST00000559201	KARS	Q15046	597 aa	Known RBP	12.06	□□□□□ -0.48
LRRC49-215	ENST00000559201	CLEC10A	Q8IUN9	316 aa		12.06	□□□□□ -0.48
LRRC49-215	ENST00000559201	VSTM4	Q8IW00	320 aa		12.06	□□□□□ -0.48
LRRC49-215	ENST00000559201	SAMD3	Q8N6K7	520 aa		12.06	□□□□□ -0.48
LRRC49-215	ENST00000559201	DHTKD1	Q96HY7	919 aa	Predicted RBP	12.06	□□□□□ -0.48
LRRC49-215	ENST00000559201	FAM20A	Q96MK3	541 aa		12.06	□□□□□ -0.48
LRRC49-215	ENST00000559201	NT5C3A	Q9H0P0	336 aa		12.06	□□□□□ -0.48
LRRC49-215	ENST00000559201	HSD3B7	Q9H2F3	369 aa		12.06	□□□□□ -0.48
LRRC49-215	ENST00000559201	VCPKMT	Q9H867	229 aa		12.06	□□□□□ -0.48
LRRC49-215	ENST00000559201	BMP2K	Q9NSY1	1161 aa	Predicted RBP	12.06	□□□□□ -0.48
LRRC49-215	ENST00000559201	ZBTB12	Q9Y330	459 aa	Predicted RBP	12.06	□□□□□ -0.48
LRRC49-215	ENST00000559201	RABGAP1	Q9Y3P9	1069 aa		12.06	□□□□□ -0.48
LRRC49-215	ENST00000559201	KDM3A	Q9Y4C1	1321 aa		12.06	□□□□□ -0.48
LRRC49-215	ENST00000559201	BICDL2	A1A5D9	508 aa		12.05	□□□□□ -0.48
LRRC49-215	ENST00000559201	LRRC10B	A6NIK2	292 aa		12.05	□□□□□ -0.48
LRRC49-215	ENST00000559201	FAM196B	A6NMK8	535 aa		12.05	□□□□□ -0.48
LRRC49-215	ENST00000559201	KIF2A	O00139	706 aa	Predicted RBP	12.05	□□□□□ -0.48
LRRC49-215	ENST00000559201	WNT10B	O00744	389 aa		12.05	□□□□□ -0.48
LRRC49-215	ENST00000559201	FDX1	P10109	184 aa		12.05	□□□□□ -0.48
LRRC49-215	ENST00000559201	PAK1	Q13153	545 aa		12.05	□□□□□ -0.48
LRRC49-215	ENST00000559201	PSMD2	Q13200	908 aa		12.05	□□□□□ -0.48
LRRC49-215	ENST00000559201	CCDC144B	Q3MJ40	725 aa		12.05	□□□□□ -0.48
LRRC49-215	ENST00000559201		Q4G0T1	1027 aa		12.05	□□□□□ -0.48
LRRC49-215	ENST00000559201	NAALADL2	Q58DX5	795 aa		12.05	□□□□□ -0.48
LRRC49-215	ENST00000559201	DNTTIP2	Q5QJE6	756 aa	Known RBP	12.05	□□□□□ -0.48
LRRC49-215	ENST00000559201	RASGRP2	Q7LDG7	609 aa		12.05	□□□□□ -0.48
LRRC49-215	ENST00000559201	TMC6	Q7Z403	805 aa		12.05	□□□□□ -0.48
LRRC49-215	ENST00000559201	FILIP1	Q7Z7B0	1213 aa		12.05	□□□□□ -0.48
LRRC49-215	ENST00000559201	CACTIN	Q8WUQ7	758 aa	Known RBP	12.05	□□□□□ -0.48
LRRC49-215	ENST00000559201	PRIMPOL	Q96LW4	560 aa		12.05	□□□□□ -0.48
LRRC49-215	ENST00000559201	ANO3	Q9BYT9	981 aa		12.05	□□□□□ -0.48
LRRC49-215	ENST00000559201	PGAP2	Q9UHJ9	254 aa		12.05	□□□□□ -0.48
LRRC49-215	ENST00000559201	NRBP1	Q9UHY1	535 aa		12.05	□□□□□ -0.48
LRRC49-215	ENST00000559201	PRR12	Q9ULL5	1215 aa		12.05	□□□□□ -0.48
LRRC49-215	ENST00000559201	PCDHA12	Q9UN75	941 aa		12.05	□□□□□ -0.48
LRRC49-215	ENST00000559201	MRPL11	Q9Y3B7	192 aa	Known RBP	12.05	□□□□□ -0.48
LRRC49-215	ENST00000559201	GREB1L	Q9C091	1923 aa	Predicted RBP	12.05	□□□□□ -0.48
LRRC49-215	ENST00000559201	SYNRG	Q9UMZ2	1314 aa		12.05	□□□□□ -0.48
LRRC49-215	ENST00000559201	PSMA7	O14818	248 aa		12.04	□□□□□ -0.48
LRRC49-215	ENST00000559201	TPM2	P07951	284 aa		12.04	□□□□□ -0.48
LRRC49-215	ENST00000559201	CYP3A4	P08684	503 aa		12.04	□□□□□ -0.48
LRRC49-215	ENST00000559201	SKIL	P12757	684 aa		12.04	□□□□□ -0.48
LRRC49-215	ENST00000559201	PLCG1	P19174	1290 aa		12.04	□□□□□ -0.48
LRRC49-215	ENST00000559201	CIITA	P33076	1130 aa		12.04	□□□□□ -0.48
LRRC49-215	ENST00000559201	FMR1	Q06787	632 aa	Known RBP eCLIP	12.04	□□□□□ -0.48
LRRC49-215	ENST00000559201	NR1I3	Q14994	352 aa		12.04	□□□□□ -0.48
LRRC49-215	ENST00000559201	HYI	Q5T013	277 aa		12.04	□□□□□ -0.48
LRRC49-215	ENST00000559201	CDKAL1	Q5VV42	579 aa		12.04	□□□□□ -0.48
LRRC49-215	ENST00000559201	DCAF15	Q66K64	600 aa		12.04	□□□□□ -0.48
LRRC49-215	ENST00000559201	FOXR2	Q6PJQ5	311 aa		12.04	□□□□□ -0.48
LRRC49-215	ENST00000559201	ADSSL1	Q8N142	457 aa		12.04	□□□□□ -0.48
LRRC49-215	ENST00000559201	GIMAP8	Q8ND71	665 aa	Predicted RBP	12.04	□□□□□ -0.48
LRRC49-215	ENST00000559201	ERMN	Q8TAM6	284 aa		12.04	□□□□□ -0.48
LRRC49-215	ENST00000559201	LPAR1	Q92633	364 aa		12.04	□□□□□ -0.48
LRRC49-215	ENST00000559201	MTR	Q99707	1265 aa		12.04	□□□□□ -0.48
LRRC49-215	ENST00000559201	DEFB129	Q9H1M3	183 aa		12.04	□□□□□ -0.48
LRRC49-215	ENST00000559201	MAP3K20	Q9NYL2	800 aa	Known RBP	12.04	□□□□□ -0.48
LRRC49-215	ENST00000559201	LIMA1	Q9UHB6	759 aa	Known RBP	12.04	□□□□□ -0.48
LRRC49-215	ENST00000559201	EP400	Q96L91	3159 aa		12.04	□□□□□ -0.48
LRRC49-215	ENST00000559201		A0A1B0GTH6	734 aa		12.03	□□□□□ -0.48
LRRC49-215	ENST00000559201		A0A1W2PRG0	241 aa		12.03	□□□□□ -0.48
LRRC49-215	ENST00000559201	FZD9	O00144	591 aa		12.03	□□□□□ -0.48
LRRC49-215	ENST00000559201	NFKBIE	O00221	500 aa		12.03	□□□□□ -0.48
LRRC49-215	ENST00000559201	MEIS2	O14770	477 aa		12.03	□□□□□ -0.48
LRRC49-215	ENST00000559201	CTNND1	O60716	968 aa	Known RBP	12.03	□□□□□ -0.48
LRRC49-215	ENST00000559201	TDP2	O95551	362 aa		12.03	□□□□□ -0.48
LRRC49-215	ENST00000559201	FGFR1OP	O95684	399 aa	Known RBP	12.03	□□□□□ -0.48
LRRC49-215	ENST00000559201	TPM1	P09493	284 aa		12.03	□□□□□ -0.48
LRRC49-215	ENST00000559201	SREBF1	P36956	1147 aa		12.03	□□□□□ -0.48
LRRC49-215	ENST00000559201	RRP1B	Q14684	758 aa	Known RBP	12.03	□□□□□ -0.48

Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms