RNA–Protein interactions for RNA: ENST00000558958.1

CLPX-203, Transcript of caseinolytic mitochondrial matrix peptidase chaperone subunit, humanhuman

TSL 1 (best)

Gene CLPX, Length 1,493 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPX-203ENST00000558958 HSD17B4P51659 736 aa20.68■□□□□ 0.9
CLPX-203ENST00000558958 DNM1Q05193 864 aaKnown RBP20.68■□□□□ 0.9
CLPX-203ENST00000558958 TAF1CQ15572 869 aaPredicted RBP20.68■□□□□ 0.9
CLPX-203ENST00000558958 MCTP2Q6DN12 878 aa20.68■□□□□ 0.9
CLPX-203ENST00000558958 REM2Q8IYK8 340 aaPredicted RBP20.68■□□□□ 0.9
CLPX-203ENST00000558958 ANKRD13CQ8N6S4 541 aa20.68■□□□□ 0.9
CLPX-203ENST00000558958 CHST13Q8NET6 341 aa20.68■□□□□ 0.9
CLPX-203ENST00000558958 GPRC5AQ8NFJ5 357 aa20.68■□□□□ 0.9
CLPX-203ENST00000558958 MAF1Q9H063 256 aa20.68■□□□□ 0.9
CLPX-203ENST00000558958 ACAD9Q9H845 621 aa20.68■□□□□ 0.9
CLPX-203ENST00000558958 MAP3K20Q9NYL2 800 aaKnown RBP20.68■□□□□ 0.9
CLPX-203ENST00000558958 ADGRA2Q96PE1 1338 aa20.67■□□□□ 0.9
CLPX-203ENST00000558958 COPB2P35606 906 aa20.67■□□□□ 0.9
CLPX-203ENST00000558958 HTRA3P83110 453 aa20.67■□□□□ 0.9
CLPX-203ENST00000558958 AP3B2Q13367 1082 aa20.67■□□□□ 0.9
CLPX-203ENST00000558958 FBXO40Q9UH90 709 aa20.67■□□□□ 0.9
CLPX-203ENST00000558958 BAG4O95429 457 aaKnown RBP20.66■□□□□ 0.9
CLPX-203ENST00000558958 FOSP01100 380 aaPredicted RBP20.66■□□□□ 0.9
CLPX-203ENST00000558958 TOB1P50616 345 aaPredicted RBP20.66■□□□□ 0.9
CLPX-203ENST00000558958 NONOQ15233 471 aaKnown RBP eCLIP20.66■□□□□ 0.9
CLPX-203ENST00000558958 RILPL1Q5EBL4 403 aa20.66■□□□□ 0.9
CLPX-203ENST00000558958 ATL3Q6DD88 541 aa20.66■□□□□ 0.9
CLPX-203ENST00000558958 ERCC3P19447 782 aa20.65■□□□□ 0.9
CLPX-203ENST00000558958 VEGFBP49765 207 aa20.65■□□□□ 0.9
CLPX-203ENST00000558958 RPS6P62753 249 aaKnown RBP20.65■□□□□ 0.9
CLPX-203ENST00000558958 FAM110CQ1W6H9 321 aa20.65■□□□□ 0.9
CLPX-203ENST00000558958 NCAPG2Q86XI2 1143 aa20.65■□□□□ 0.9
CLPX-203ENST00000558958 SHCBP1Q8NEM2 672 aa20.65■□□□□ 0.9
CLPX-203ENST00000558958 PGBD1Q96JS3 809 aa20.65■□□□□ 0.9
CLPX-203ENST00000558958 ZNF396Q96N95 335 aaPredicted RBP20.65■□□□□ 0.9
CLPX-203ENST00000558958 TLR2O60603 784 aa20.64■□□□□ 0.89
CLPX-203ENST00000558958 ALDH1A1P00352 501 aa20.64■□□□□ 0.89
CLPX-203ENST00000558958 MAP2K2P36507 400 aa20.64■□□□□ 0.89
CLPX-203ENST00000558958 TRAPPC10P48553 1259 aa20.64■□□□□ 0.89
CLPX-203ENST00000558958 CCNA1P78396 465 aa20.64■□□□□ 0.89
CLPX-203ENST00000558958 INF2Q27J81 1249 aa20.64■□□□□ 0.89
CLPX-203ENST00000558958 NSMFQ6X4W1 530 aa20.64■□□□□ 0.89
CLPX-203ENST00000558958 RNF207Q6ZRF8 634 aa20.64■□□□□ 0.89
CLPX-203ENST00000558958 DHX30Q7L2E3 1194 aaKnown RBP eCLIP20.64■□□□□ 0.89
CLPX-203ENST00000558958 TBCKQ8TEA7 893 aa20.64■□□□□ 0.89
CLPX-203ENST00000558958 ANO3Q9BYT9 981 aa20.64■□□□□ 0.89
CLPX-203ENST00000558958 MROH8Q9H579 483 aa20.64■□□□□ 0.89
CLPX-203ENST00000558958 ZFYVE28Q9HCC9 887 aa20.64■□□□□ 0.89
CLPX-203ENST00000558958 A1CFQ9NQ94 594 aaKnown RBP20.64■□□□□ 0.89
CLPX-203ENST00000558958 TFIP11Q9UBB9 837 aaKnown RBP20.64■□□□□ 0.89
CLPX-203ENST00000558958 NOL7Q9UMY1 257 aaKnown RBP20.64■□□□□ 0.89
CLPX-203ENST00000558958 SPDYE3A6NKU9 549 aa20.63■□□□□ 0.89
CLPX-203ENST00000558958 BCRP11274 1271 aa20.63■□□□□ 0.89
CLPX-203ENST00000558958 KRT85P78386 507 aa20.63■□□□□ 0.89
CLPX-203ENST00000558958 BAATQ14032 418 aaPredicted RBP20.63■□□□□ 0.89
CLPX-203ENST00000558958 SLC30A10Q6XR72 485 aa20.63■□□□□ 0.89
CLPX-203ENST00000558958 FCHSD1Q86WN1 690 aa20.63■□□□□ 0.89
CLPX-203ENST00000558958 SYTL5Q8TDW5 730 aaPredicted RBP20.63■□□□□ 0.89
CLPX-203ENST00000558958 GBP4Q96PP9 640 aa20.63■□□□□ 0.89
CLPX-203ENST00000558958 USP28Q96RU2 1077 aa20.63■□□□□ 0.89
CLPX-203ENST00000558958 R3HDMLQ9H3Y0 253 aa20.63■□□□□ 0.89
CLPX-203ENST00000558958 CYP39A1Q9NYL5 469 aa20.63■□□□□ 0.89
CLPX-203ENST00000558958 MYH15Q9Y2K3 1946 aa20.63■□□□□ 0.89
CLPX-203ENST00000558958 CA12O43570 354 aa20.62■□□□□ 0.89
CLPX-203ENST00000558958 CRHR2Q13324 411 aa20.62■□□□□ 0.89
CLPX-203ENST00000558958 FTOQ9C0B1 505 aaKnown RBP eCLIP20.62■□□□□ 0.892e-12■□□□□ 10.9
CLPX-203ENST00000558958 PORCNQ9H237 461 aa20.62■□□□□ 0.89
CLPX-203ENST00000558958 COL20A1Q9P218 1284 aa20.62■□□□□ 0.89
CLPX-203ENST00000558958 CPA4Q9UI42 421 aa20.62■□□□□ 0.89
CLPX-203ENST00000558958 CFAP45Q9UL16 551 aa20.62■□□□□ 0.89
CLPX-203ENST00000558958 CNPY2Q9Y2B0 182 aa20.62■□□□□ 0.89
CLPX-203ENST00000558958 RBBP6Q7Z6E9 1792 aaKnown RBP20.62■□□□□ 0.89
CLPX-203ENST00000558958 NCLP19338 710 aaKnown RBP20.62■□□□□ 0.89
CLPX-203ENST00000558958 ATP2B1P20020 1258 aa20.62■□□□□ 0.89
CLPX-203ENST00000558958 NBR1Q14596 966 aa20.62■□□□□ 0.89
CLPX-203ENST00000558958 C17orf99Q6UX52 265 aa20.62■□□□□ 0.89
CLPX-203ENST00000558958 NEK8Q86SG6 692 aa20.62■□□□□ 0.89
CLPX-203ENST00000558958 CRYGNQ8WXF5 182 aa20.62■□□□□ 0.89
CLPX-203ENST00000558958 EFCC1Q9HA90 598 aa20.62■□□□□ 0.89
CLPX-203ENST00000558958 POLR3EQ9NVU0 708 aa20.62■□□□□ 0.89
CLPX-203ENST00000558958 RTEL1Q9NZ71 1219 aa20.62■□□□□ 0.89
CLPX-203ENST00000558958 CLIC4Q9Y696 253 aa20.62■□□□□ 0.89
CLPX-203ENST00000558958 PFASO15067 1338 aa20.61■□□□□ 0.89
CLPX-203ENST00000558958 WNT7AO00755 349 aa20.61■□□□□ 0.89
CLPX-203ENST00000558958 EDIL3O43854 480 aa20.61■□□□□ 0.89
CLPX-203ENST00000558958 SREBF1P36956 1147 aa20.61■□□□□ 0.89
CLPX-203ENST00000558958 TTC38Q5R3I4 469 aa20.61■□□□□ 0.89
CLPX-203ENST00000558958 ANO1Q5XXA6 986 aa20.61■□□□□ 0.89
CLPX-203ENST00000558958 ANKRD35Q8N283 1001 aa20.61■□□□□ 0.89
CLPX-203ENST00000558958 PCDHB6Q9Y5E3 794 aa20.61■□□□□ 0.89
CLPX-203ENST00000558958 NASPP49321 788 aaPredicted RBP20.6■□□□□ 0.89
CLPX-203ENST00000558958 CEBPZQ03701 1054 aaKnown RBP20.6■□□□□ 0.89
CLPX-203ENST00000558958 SF3A1Q15459 793 aaKnown RBP20.6■□□□□ 0.89
CLPX-203ENST00000558958 SCAND2PQ9GZW5 306 aaPredicted RBP20.6■□□□□ 0.89
CLPX-203ENST00000558958 EHMT1Q9H9B1 1298 aa20.6■□□□□ 0.89
CLPX-203ENST00000558958 RPTORQ8N122 1335 aa20.6■□□□□ 0.89
CLPX-203ENST00000558958 TCHHQ07283 1943 aa20.59■□□□□ 0.89
CLPX-203ENST00000558958 HSPA6P17066 643 aa20.59■□□□□ 0.89
CLPX-203ENST00000558958 USP11P51784 963 aa20.59■□□□□ 0.89
CLPX-203ENST00000558958 C1QTNF8P60827 252 aa20.59■□□□□ 0.89
CLPX-203ENST00000558958 ARHGAP4P98171 946 aa20.59■□□□□ 0.89
CLPX-203ENST00000558958 LETM2Q2VYF4 491 aa20.59■□□□□ 0.89
CLPX-203ENST00000558958 TAAR1Q96RJ0 339 aa20.59■□□□□ 0.89
CLPX-203ENST00000558958 EIF4ENIF1Q9NRA8 985 aaKnown RBP20.59■□□□□ 0.89
CLPX-203ENST00000558958 FRMPD4Q14CM0 1322 aa20.59■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 315.2 ms