RNA–Protein interactions for RNA: ENST00000558910.2

TPM1-216, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 1,232 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-216ENST00000558910 RAB11FIP4Q86YS3 637 aa14.04□□□□□ -0.16
TPM1-216ENST00000558910 STAG2Q8N3U4 1231 aa14.04□□□□□ -0.16
TPM1-216ENST00000558910 MAP4K1Q92918 833 aa14.04□□□□□ -0.16
TPM1-216ENST00000558910 LRRC2Q9BYS8 371 aa14.04□□□□□ -0.16
TPM1-216ENST00000558910 LSG1Q9H089 658 aaKnown RBP14.04□□□□□ -0.16
TPM1-216ENST00000558910 RANBP17Q9H2T7 1088 aaKnown RBP14.04□□□□□ -0.16
TPM1-216ENST00000558910 A1CFQ9NQ94 594 aaKnown RBP14.04□□□□□ -0.16
TPM1-216ENST00000558910 FBXO40Q9UH90 709 aa14.04□□□□□ -0.16
TPM1-216ENST00000558910 CNPY2Q9Y2B0 182 aa14.04□□□□□ -0.16
TPM1-216ENST00000558910 ZNFX1Q9P2E3 1918 aaKnown RBP14.03□□□□□ -0.16
TPM1-216ENST00000558910 ERICH2A1L162 156 aa14.03□□□□□ -0.16
TPM1-216ENST00000558910 NFIBO00712 420 aa14.03□□□□□ -0.16
TPM1-216ENST00000558910 ATP2A1O14983 1001 aa14.03□□□□□ -0.16
TPM1-216ENST00000558910 PGK1P00558 417 aa14.03□□□□□ -0.16
TPM1-216ENST00000558910 CENPBP07199 599 aaPredicted RBP14.03□□□□□ -0.16
TPM1-216ENST00000558910 PARP1P09874 1014 aaKnown RBP14.03□□□□□ -0.16
TPM1-216ENST00000558910 FDX1P10109 184 aa14.03□□□□□ -0.16
TPM1-216ENST00000558910 OAZ1P54368 228 aa14.03□□□□□ -0.16
TPM1-216ENST00000558910 TMEM67Q5HYA8 995 aa14.03□□□□□ -0.16
TPM1-216ENST00000558910 NOL8Q76FK4 1167 aaKnown RBP14.03□□□□□ -0.16
TPM1-216ENST00000558910 NCOA7Q8NI08 942 aa14.03□□□□□ -0.16
TPM1-216ENST00000558910 NUP133Q8WUM0 1156 aa14.03□□□□□ -0.16
TPM1-216ENST00000558910 LAMA4Q16363 1823 aa14.02□□□□□ -0.16
TPM1-216ENST00000558910 PFASO15067 1338 aa14.02□□□□□ -0.17
TPM1-216ENST00000558910 SOWAHBA6NEL2 793 aa14.02□□□□□ -0.17
TPM1-216ENST00000558910 SLC27A2O14975 620 aa14.02□□□□□ -0.17
TPM1-216ENST00000558910 SEPT4O43236 478 aa14.02□□□□□ -0.17
TPM1-216ENST00000558910 PLA2G6O60733 806 aa14.02□□□□□ -0.17
TPM1-216ENST00000558910 CDC45O75419 566 aa14.02□□□□□ -0.17
TPM1-216ENST00000558910 SNAI1O95863 264 aaPredicted RBP14.02□□□□□ -0.17
TPM1-216ENST00000558910 ICAM1P05362 532 aa14.02□□□□□ -0.17
TPM1-216ENST00000558910 PTGS1P23219 599 aa14.02□□□□□ -0.17
TPM1-216ENST00000558910 BAATQ14032 418 aaPredicted RBP14.02□□□□□ -0.17
TPM1-216ENST00000558910 COL9A3Q14050 684 aaPredicted RBP14.02□□□□□ -0.17
TPM1-216ENST00000558910 WTAPQ15007 396 aa14.02□□□□□ -0.17
TPM1-216ENST00000558910 CDC37Q16543 378 aaPredicted RBP14.02□□□□□ -0.17
TPM1-216ENST00000558910 BMP2KLQ5H9B9 411 aa14.02□□□□□ -0.17
TPM1-216ENST00000558910 CREB3L3Q68CJ9 461 aa14.02□□□□□ -0.17
TPM1-216ENST00000558910 CASC1Q6TDU7 716 aa14.02□□□□□ -0.17
TPM1-216ENST00000558910 BTNL9Q6UXG8 535 aa14.02□□□□□ -0.17
TPM1-216ENST00000558910 NFXL1Q6ZNB6 911 aa14.02□□□□□ -0.17
TPM1-216ENST00000558910 ARMCX2Q7L311 632 aa14.02□□□□□ -0.17
TPM1-216ENST00000558910 HOMER1Q86YM7 354 aa14.02□□□□□ -0.17
TPM1-216ENST00000558910 CCDC144CPQ8IYA2 1237 aa14.02□□□□□ -0.17
TPM1-216ENST00000558910 ADGRF4Q8IZF3 695 aa14.02□□□□□ -0.17
TPM1-216ENST00000558910 MYL10Q9BUA6 226 aa14.02□□□□□ -0.17
TPM1-216ENST00000558910 CDKN2AIPQ9NXV6 580 aaPredicted RBP14.02□□□□□ -0.17
TPM1-216ENST00000558910 KBTBD13C9JR72 458 aa14.01□□□□□ -0.17
TPM1-216ENST00000558910 RARBP10826 455 aa14.01□□□□□ -0.17
TPM1-216ENST00000558910 SEC23AQ15436 765 aa14.01□□□□□ -0.17
TPM1-216ENST00000558910 TKFCQ3LXA3 575 aa14.01□□□□□ -0.17
TPM1-216ENST00000558910 GPATCH4Q5T3I0 446 aaKnown RBP14.01□□□□□ -0.17
TPM1-216ENST00000558910 SLC30A10Q6XR72 485 aa14.01□□□□□ -0.17
TPM1-216ENST00000558910 ANKLE1Q8NAG6 615 aa14.01□□□□□ -0.17
TPM1-216ENST00000558910 FGD4Q96M96 766 aa14.01□□□□□ -0.17
TPM1-216ENST00000558910 XPNPEP3Q9NQH7 507 aa14.01□□□□□ -0.17
TPM1-216ENST00000558910 VPS9D1Q9Y2B5 631 aa14.01□□□□□ -0.17
TPM1-216ENST00000558910 ARIH1Q9Y4X5 557 aaPredicted RBP14.01□□□□□ -0.17
TPM1-216ENST00000558910 NR2E3Q9Y5X4 410 aa14.01□□□□□ -0.17
TPM1-216ENST00000558910 DNAH12Q6ZR08 3092 aa14.01□□□□□ -0.17
TPM1-216ENST00000558910 ZNF236Q9UL36 1845 aa14□□□□□ -0.17
TPM1-216ENST00000558910 DNAJC25-GNG10A0A024R161 153 aa14□□□□□ -0.17
TPM1-216ENST00000558910 PRC1O43663 620 aa14□□□□□ -0.17
TPM1-216ENST00000558910 MSCO60682 206 aa14□□□□□ -0.17
TPM1-216ENST00000558910 ZNF865P0CJ78 1059 aaPredicted RBP14□□□□□ -0.17
TPM1-216ENST00000558910 SNHG28P0DPA3 235 aa14□□□□□ -0.17
TPM1-216ENST00000558910 RXRAP19793 462 aa14□□□□□ -0.17
TPM1-216ENST00000558910 ADCYAP1R1P41586 468 aa14□□□□□ -0.17
TPM1-216ENST00000558910 ANTXR2P58335 489 aa14□□□□□ -0.17
TPM1-216ENST00000558910 ACVR2BQ13705 512 aa14□□□□□ -0.17
TPM1-216ENST00000558910 SART3Q15020 963 aaKnown RBP14□□□□□ -0.17
TPM1-216ENST00000558910 LRRC26Q2I0M4 334 aa14□□□□□ -0.17
TPM1-216ENST00000558910 FBXO16Q8IX29 292 aaPredicted RBP14□□□□□ -0.17
TPM1-216ENST00000558910 TBC1D5Q92609 795 aa14□□□□□ -0.17
TPM1-216ENST00000558910 TCEANC2Q96MN5 208 aa14□□□□□ -0.17
TPM1-216ENST00000558910 CYP39A1Q9NYL5 469 aa14□□□□□ -0.17
TPM1-216ENST00000558910 ATP11BQ9Y2G3 1177 aa14□□□□□ -0.17
TPM1-216ENST00000558910 DIS3Q9Y2L1 958 aaKnown RBP14□□□□□ -0.17
TPM1-216ENST00000558910 PLXNA1Q9UIW2 1896 aa13.99□□□□□ -0.17
TPM1-216ENST00000558910 SMCHD1A6NHR9 2005 aa13.99□□□□□ -0.17
TPM1-216ENST00000558910 C11orf97A0A1B0GVM6 126 aaPredicted RBP13.99□□□□□ -0.17
TPM1-216ENST00000558910 KLRF2D3W0D1 207 aa13.99□□□□□ -0.17
TPM1-216ENST00000558910 IGHA2P01877 340 aa13.99□□□□□ -0.17
TPM1-216ENST00000558910 AKR1A1P14550 325 aa13.99□□□□□ -0.17
TPM1-216ENST00000558910 LRRC41Q15345 812 aa13.99□□□□□ -0.17
TPM1-216ENST00000558910 QRICH1Q2TAL8 776 aa13.99□□□□□ -0.17
TPM1-216ENST00000558910 ASPRV1Q53RT3 343 aa13.99□□□□□ -0.17
TPM1-216ENST00000558910 RNF207Q6ZRF8 634 aa13.99□□□□□ -0.17
TPM1-216ENST00000558910 MB21D2Q8IYB1 491 aaPredicted RBP13.99□□□□□ -0.17
TPM1-216ENST00000558910 FAM133AQ8N9E0 248 aa13.99□□□□□ -0.17
TPM1-216ENST00000558910 ARRDC4Q8NCT1 418 aa13.99□□□□□ -0.17
TPM1-216ENST00000558910 ANKS1AQ92625 1134 aa13.99□□□□□ -0.17
TPM1-216ENST00000558910 EPAS1Q99814 870 aa13.99□□□□□ -0.17
TPM1-216ENST00000558910 ZBED2Q9BTP6 218 aa13.99□□□□□ -0.17
TPM1-216ENST00000558910 JMJD4Q9H9V9 463 aa13.99□□□□□ -0.17
TPM1-216ENST00000558910 FAM184BQ9ULE4 1060 aa13.99□□□□□ -0.17
TPM1-216ENST00000558910 NAP1L2Q9ULW6 460 aaPredicted RBP13.99□□□□□ -0.17
TPM1-216ENST00000558910 SYNGAP1Q96PV0 1343 aa13.98□□□□□ -0.17
TPM1-216ENST00000558910 ADCY6O43306 1168 aa13.98□□□□□ -0.17
TPM1-216ENST00000558910 CCDC144BQ3MJ40 725 aa13.98□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms