RNA–Protein interactions for RNA: ENST00000558862.2

FAM227B-206, Transcript of family with sequence similarity 227 member B, humanhuman

TSL 2

Gene FAM227B, Length 670 nt, Biotype processed transcript, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM227B-206ENST00000558862 CDK5RAP2Q96SN8 1893 aa10.84□□□□□ -0.67
FAM227B-206ENST00000558862 USP9XQ93008 2570 aaPredicted RBP10.84□□□□□ -0.67
FAM227B-206ENST00000558862 SALL1Q9NSC2 1324 aa10.84□□□□□ -0.67
FAM227B-206ENST00000558862 FANCIQ9NVI1 1328 aa10.84□□□□□ -0.67
FAM227B-206ENST00000558862 RALGAPA2Q2PPJ7 1873 aa10.83□□□□□ -0.68
FAM227B-206ENST00000558862 COL4A3Q01955 1670 aa10.83□□□□□ -0.68
FAM227B-206ENST00000558862 BRD1O95696 1058 aa10.83□□□□□ -0.68
FAM227B-206ENST00000558862 LDHBP07195 334 aaKnown RBP10.83□□□□□ -0.68
FAM227B-206ENST00000558862 CASP7P55210 303 aa10.83□□□□□ -0.68
FAM227B-206ENST00000558862 BEX3Q00994 111 aa10.83□□□□□ -0.68
FAM227B-206ENST00000558862 COASYQ13057 564 aa10.83□□□□□ -0.68
FAM227B-206ENST00000558862 ZNF792Q3KQV3 632 aa10.83□□□□□ -0.68
FAM227B-206ENST00000558862 RETREG2Q8NC44 543 aa10.83□□□□□ -0.68
FAM227B-206ENST00000558862 ALDH8A1Q9H2A2 487 aaPredicted RBP10.83□□□□□ -0.68
FAM227B-206ENST00000558862 HERC5Q9UII4 1024 aaKnown RBP10.83□□□□□ -0.68
FAM227B-206ENST00000558862 INSL6Q9Y581 213 aa10.83□□□□□ -0.68
FAM227B-206ENST00000558862 BPTFQ12830 3046 aa10.82□□□□□ -0.68
FAM227B-206ENST00000558862 CTAGE5O15320 804 aa10.82□□□□□ -0.68
FAM227B-206ENST00000558862 VCAM1P19320 739 aa10.82□□□□□ -0.68
FAM227B-206ENST00000558862 RBM25P49756 843 aaKnown RBP10.82□□□□□ -0.68
FAM227B-206ENST00000558862 CCDC57Q2TAC2 916 aa10.82□□□□□ -0.68
FAM227B-206ENST00000558862 FEZ1Q99689 392 aa10.82□□□□□ -0.68
FAM227B-206ENST00000558862 RTP3Q9BQQ7 232 aa10.82□□□□□ -0.68
FAM227B-206ENST00000558862 TRMT13Q9NUP7 481 aaKnown RBP10.82□□□□□ -0.68
FAM227B-206ENST00000558862 USP18Q9UMW8 372 aa10.82□□□□□ -0.68
FAM227B-206ENST00000558862 SMG1Q96Q15 3661 aaKnown RBP10.82□□□□□ -0.68
FAM227B-206ENST00000558862 ZZEF1O43149 2961 aa10.82□□□□□ -0.68
FAM227B-206ENST00000558862 ATAD5Q96QE3 1844 aa10.81□□□□□ -0.68
FAM227B-206ENST00000558862 SLC30A4O14863 429 aa10.81□□□□□ -0.68
FAM227B-206ENST00000558862 ADCY6O43306 1168 aa10.81□□□□□ -0.68
FAM227B-206ENST00000558862 ARP10275 920 aa10.81□□□□□ -0.68
FAM227B-206ENST00000558862 ATF7P17544 494 aaPredicted RBP10.81□□□□□ -0.68
FAM227B-206ENST00000558862 FOSBP53539 338 aa10.81□□□□□ -0.68
FAM227B-206ENST00000558862 PSMC6P62333 389 aa10.81□□□□□ -0.68
FAM227B-206ENST00000558862 PLS1Q14651 629 aa10.81□□□□□ -0.68
FAM227B-206ENST00000558862 SHROOM1Q2M3G4 852 aaPredicted RBP10.81□□□□□ -0.68
FAM227B-206ENST00000558862 N4BP2L1Q5TBK1 243 aaPredicted RBP10.81□□□□□ -0.68
FAM227B-206ENST00000558862 KSR2Q6VAB6 950 aa10.81□□□□□ -0.68
FAM227B-206ENST00000558862 ADAM32Q8TC27 787 aa10.81□□□□□ -0.68
FAM227B-206ENST00000558862 RIN2Q8WYP3 895 aaPredicted RBP10.81□□□□□ -0.68
FAM227B-206ENST00000558862 SECISBP2LQ93073 1101 aaKnown RBP10.81□□□□□ -0.68
FAM227B-206ENST00000558862 MMP19Q99542 508 aa10.81□□□□□ -0.68
FAM227B-206ENST00000558862 CLEC1BQ9P126 229 aa10.81□□□□□ -0.68
FAM227B-206ENST00000558862 SCN5AQ14524 2016 aa10.8□□□□□ -0.68
FAM227B-206ENST00000558862 COL11A1P12107 1806 aaPredicted RBP10.8□□□□□ -0.68
FAM227B-206ENST00000558862 PI4KAP2A4QPH2 592 aa10.8□□□□□ -0.68
FAM227B-206ENST00000558862 SNAI1O95863 264 aaPredicted RBP10.8□□□□□ -0.68
FAM227B-206ENST00000558862 TMEM192Q8IY95 271 aa10.8□□□□□ -0.68
FAM227B-206ENST00000558862 PI4KAP1Q8N8J0 262 aa10.8□□□□□ -0.68
FAM227B-206ENST00000558862 NETO1Q8TDF5 533 aa10.8□□□□□ -0.68
FAM227B-206ENST00000558862 TSR2Q969E8 191 aaKnown RBP10.8□□□□□ -0.68
FAM227B-206ENST00000558862 RPAP3Q9H6T3 665 aaPredicted RBP10.8□□□□□ -0.68
FAM227B-206ENST00000558862 GINM1Q9NU53 330 aa10.8□□□□□ -0.68
FAM227B-206ENST00000558862 RCAN3Q9UKA8 241 aa10.8□□□□□ -0.68
FAM227B-206ENST00000558862 ZBTB21Q9ULJ3 1066 aa10.8□□□□□ -0.68
FAM227B-206ENST00000558862 FRYLO94915 3013 aa10.8□□□□□ -0.68
FAM227B-206ENST00000558862 PTPRSQ13332 1948 aa10.8□□□□□ -0.68
FAM227B-206ENST00000558862 FRYQ5TBA9 3013 aa10.79□□□□□ -0.68
FAM227B-206ENST00000558862 EIF4E1BA6NMX2 242 aaKnown RBP10.79□□□□□ -0.68
FAM227B-206ENST00000558862 KINO60870 393 aaKnown RBP10.79□□□□□ -0.68
FAM227B-206ENST00000558862 GDF11O95390 407 aa10.79□□□□□ -0.68
FAM227B-206ENST00000558862 USP14P54578 494 aa10.79□□□□□ -0.68
FAM227B-206ENST00000558862 NKX3-2P78367 333 aa10.79□□□□□ -0.68
FAM227B-206ENST00000558862 FOXO4P98177 505 aa10.79□□□□□ -0.68
FAM227B-206ENST00000558862 EXOSC9Q06265 439 aaKnown RBP10.79□□□□□ -0.68
FAM227B-206ENST00000558862 FBXO11Q86XK2 927 aa10.79□□□□□ -0.68
FAM227B-206ENST00000558862 MSL3Q8N5Y2 521 aaKnown RBP10.79□□□□□ -0.68
FAM227B-206ENST00000558862 PPIL4Q8WUA2 492 aaKnown RBP eCLIP10.79□□□□□ -0.68
FAM227B-206ENST00000558862 SMOC2Q9H3U7 446 aa10.79□□□□□ -0.68
FAM227B-206ENST00000558862 HOXC10Q9NYD6 342 aa10.79□□□□□ -0.68
FAM227B-206ENST00000558862 MROH5Q6ZUA9 1318 aa10.79□□□□□ -0.68
FAM227B-206ENST00000558862 MYO7AQ13402 2215 aa10.78□□□□□ -0.68
FAM227B-206ENST00000558862 ABHD14A-ACY1A0A1B0GW23 586 aa10.78□□□□□ -0.68
FAM227B-206ENST00000558862 TMEM8BA6NDV4 472 aa10.78□□□□□ -0.68
FAM227B-206ENST00000558862 KRT38O76015 456 aa10.78□□□□□ -0.68
FAM227B-206ENST00000558862 SP9P0CG40 484 aa10.78□□□□□ -0.68
FAM227B-206ENST00000558862 ACVR2BQ13705 512 aa10.78□□□□□ -0.68
FAM227B-206ENST00000558862 TWISTNBQ3B726 338 aaPredicted RBP10.78□□□□□ -0.68
FAM227B-206ENST00000558862 CCDC144BQ3MJ40 725 aa10.78□□□□□ -0.68
FAM227B-206ENST00000558862 ALDH1L2Q3SY69 923 aa10.78□□□□□ -0.68
FAM227B-206ENST00000558862 LMAN2LQ9H0V9 348 aa10.78□□□□□ -0.68
FAM227B-206ENST00000558862 ZEB2O60315 1214 aa10.77□□□□□ -0.69
FAM227B-206ENST00000558862 NPR3P17342 541 aa10.77□□□□□ -0.69
FAM227B-206ENST00000558862 SP100P23497 879 aaPredicted RBP10.77□□□□□ -0.69
FAM227B-206ENST00000558862 BTDP43251 543 aa10.77□□□□□ -0.69
FAM227B-206ENST00000558862 COG2Q14746 738 aa10.77□□□□□ -0.69
FAM227B-206ENST00000558862 CNKSR3Q6P9H4 555 aa10.77□□□□□ -0.69
FAM227B-206ENST00000558862 LMBR1LQ6UX01 489 aa10.77□□□□□ -0.69
FAM227B-206ENST00000558862 MB21D1Q8N884 522 aa10.77□□□□□ -0.69
FAM227B-206ENST00000558862 DDX1Q92499 740 aaKnown RBP10.77□□□□□ -0.69
FAM227B-206ENST00000558862 PUS3Q9BZE2 481 aaKnown RBP10.77□□□□□ -0.69
FAM227B-206ENST00000558862 GOLGA8CPA6NN73 597 aa10.76□□□□□ -0.69
FAM227B-206ENST00000558862 BHMG1C9JSJ3 638 aaPredicted RBP10.76□□□□□ -0.69
FAM227B-206ENST00000558862 EFCAB14O75071 495 aa10.76□□□□□ -0.69
FAM227B-206ENST00000558862 VAMP4O75379 141 aa10.76□□□□□ -0.69
FAM227B-206ENST00000558862 CSPG5O95196 566 aa10.76□□□□□ -0.69
FAM227B-206ENST00000558862 TGM1P22735 817 aa10.76□□□□□ -0.69
FAM227B-206ENST00000558862 HTRA4P83105 476 aaPredicted RBP10.76□□□□□ -0.69
FAM227B-206ENST00000558862 LRRFIP1Q32MZ4 808 aaKnown RBP10.76□□□□□ -0.69
FAM227B-206ENST00000558862 LARP1BQ659C4 914 aaKnown RBP10.76□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms