RNA–Protein interactions for RNA: ENST00000558400.1

TPM1-213, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 658 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-213ENST00000558400 A0A0G2JMZ2 1700 aa9.85□□□□□ -0.83
TPM1-213ENST00000558400 SNAI1O95863 264 aaPredicted RBP9.84□□□□□ -0.83
TPM1-213ENST00000558400 ZNF865P0CJ78 1059 aaPredicted RBP9.84□□□□□ -0.83
TPM1-213ENST00000558400 RCAN1P53805 252 aa9.84□□□□□ -0.83
TPM1-213ENST00000558400 CNTN2Q02246 1040 aa9.84□□□□□ -0.83
TPM1-213ENST00000558400 QRICH1Q2TAL8 776 aa9.84□□□□□ -0.83
TPM1-213ENST00000558400 IQSEC1Q6DN90 963 aa9.84□□□□□ -0.83
TPM1-213ENST00000558400 ARMCX2Q7L311 632 aa9.84□□□□□ -0.83
TPM1-213ENST00000558400 RNF180Q86T96 592 aa9.84□□□□□ -0.83
TPM1-213ENST00000558400 CCDC144CPQ8IYA2 1237 aa9.84□□□□□ -0.83
TPM1-213ENST00000558400 RASEFQ8IZ41 740 aa9.84□□□□□ -0.83
TPM1-213ENST00000558400 FBXL16Q8N461 479 aa9.84□□□□□ -0.83
TPM1-213ENST00000558400 FANCBQ8NB91 859 aa9.84□□□□□ -0.83
TPM1-213ENST00000558400 TRPV1Q8NER1 839 aa9.84□□□□□ -0.83
TPM1-213ENST00000558400 CLEC4DQ8WXI8 215 aa9.84□□□□□ -0.83
TPM1-213ENST00000558400 USP26Q9BXU7 913 aa9.84□□□□□ -0.83
TPM1-213ENST00000558400 CPVLQ9H3G5 476 aa9.84□□□□□ -0.83
TPM1-213ENST00000558400 C11orf49Q9H6J7 331 aa9.84□□□□□ -0.83
TPM1-213ENST00000558400 SPC25Q9HBM1 224 aa9.84□□□□□ -0.83
TPM1-213ENST00000558400 CDKN2AIPQ9NXV6 580 aaPredicted RBP9.84□□□□□ -0.83
TPM1-213ENST00000558400 STXBP5LQ9Y2K9 1186 aa9.84□□□□□ -0.83
TPM1-213ENST00000558400 PCDHA1Q9Y5I3 950 aa9.84□□□□□ -0.83
TPM1-213ENST00000558400 PLXNB2O15031 1838 aa9.84□□□□□ -0.83
TPM1-213ENST00000558400 CCDC196A0A1B0GTZ2 297 aa9.83□□□□□ -0.84
TPM1-213ENST00000558400 SOWAHBA6NEL2 793 aa9.83□□□□□ -0.84
TPM1-213ENST00000558400 KBTBD13C9JR72 458 aa9.83□□□□□ -0.84
TPM1-213ENST00000558400 DNM1LO00429 736 aa9.83□□□□□ -0.84
TPM1-213ENST00000558400 NFIBO00712 420 aa9.83□□□□□ -0.84
TPM1-213ENST00000558400 DUSP11O75319 330 aaKnown RBP9.83□□□□□ -0.84
TPM1-213ENST00000558400 RPS6P62753 249 aaKnown RBP9.83□□□□□ -0.84
TPM1-213ENST00000558400 USH1GQ495M9 461 aa9.83□□□□□ -0.84
TPM1-213ENST00000558400 BLOC1S2Q6QNY1 142 aa9.83□□□□□ -0.84
TPM1-213ENST00000558400 MORC4Q8TE76 937 aa9.83□□□□□ -0.84
TPM1-213ENST00000558400 RRP36Q96EU6 259 aaKnown RBP9.83□□□□□ -0.84
TPM1-213ENST00000558400 SPZ1Q9BXG8 430 aa9.83□□□□□ -0.84
TPM1-213ENST00000558400 SENP2Q9HC62 589 aa9.83□□□□□ -0.84
TPM1-213ENST00000558400 RBM28Q9NW13 759 aaKnown RBP9.83□□□□□ -0.84
TPM1-213ENST00000558400 LAMA4Q16363 1823 aa9.83□□□□□ -0.84
TPM1-213ENST00000558400 PARP14Q460N5 1801 aa9.83□□□□□ -0.84
TPM1-213ENST00000558400 ZNF236Q9UL36 1845 aa9.83□□□□□ -0.84
TPM1-213ENST00000558400 ZNFX1Q9P2E3 1918 aaKnown RBP9.82□□□□□ -0.84
TPM1-213ENST00000558400 CALML3P27482 149 aa9.82□□□□□ -0.84
TPM1-213ENST00000558400 ADCK5Q3MIX3 580 aa9.82□□□□□ -0.84
TPM1-213ENST00000558400 CCDC144BQ3MJ40 725 aa9.82□□□□□ -0.84
TPM1-213ENST00000558400 GPR153Q6NV75 609 aa9.82□□□□□ -0.84
TPM1-213ENST00000558400 NSUN6Q8TEA1 469 aaKnown RBP9.82□□□□□ -0.84
TPM1-213ENST00000558400 FGD4Q96M96 766 aa9.82□□□□□ -0.84
TPM1-213ENST00000558400 JAKMIP1Q96N16 626 aaKnown RBP9.82□□□□□ -0.84
TPM1-213ENST00000558400 PIGSQ96S52 555 aa9.82□□□□□ -0.84
TPM1-213ENST00000558400 IWS1Q96ST2 819 aa9.82□□□□□ -0.84
TPM1-213ENST00000558400 TSEN34Q9BSV6 310 aaKnown RBP9.82□□□□□ -0.84
TPM1-213ENST00000558400 TM6SF1Q9BZW5 370 aa9.82□□□□□ -0.84
TPM1-213ENST00000558400 VTA1Q9NP79 307 aa9.82□□□□□ -0.84
TPM1-213ENST00000558400 XPNPEP3Q9NQH7 507 aa9.82□□□□□ -0.84
TPM1-213ENST00000558400 SEC63Q9UGP8 760 aaKnown RBP9.82□□□□□ -0.84
TPM1-213ENST00000558400 ZHX1Q9UKY1 873 aaPredicted RBP9.82□□□□□ -0.84
TPM1-213ENST00000558400 Q9Y3F1 56 aa9.82□□□□□ -0.84
TPM1-213ENST00000558400 SNX14Q9Y5W7 946 aa9.82□□□□□ -0.84
TPM1-213ENST00000558400 COL11A1P12107 1806 aaPredicted RBP9.82□□□□□ -0.84
TPM1-213ENST00000558400 ZBTB43O43298 467 aa9.81□□□□□ -0.84
TPM1-213ENST00000558400 CYTH3O43739 400 aa9.81□□□□□ -0.84
TPM1-213ENST00000558400 EVI5O60447 810 aa9.81□□□□□ -0.84
TPM1-213ENST00000558400 COL6A1P12109 1028 aa9.81□□□□□ -0.84
TPM1-213ENST00000558400 TAL1P17542 331 aaPredicted RBP9.81□□□□□ -0.84
TPM1-213ENST00000558400 ALDH5A1P51649 535 aaPredicted RBP9.81□□□□□ -0.84
TPM1-213ENST00000558400 GHRHRQ02643 423 aa9.81□□□□□ -0.84
TPM1-213ENST00000558400 TNFAIP2Q03169 654 aa9.81□□□□□ -0.84
TPM1-213ENST00000558400 PDE4DQ08499 809 aa9.81□□□□□ -0.84
TPM1-213ENST00000558400 LRRC41Q15345 812 aa9.81□□□□□ -0.84
TPM1-213ENST00000558400 APOA5Q6Q788 366 aa9.81□□□□□ -0.84
TPM1-213ENST00000558400 HOMER1Q86YM7 354 aa9.81□□□□□ -0.84
TPM1-213ENST00000558400 TEX2Q8IWB9 1127 aa9.81□□□□□ -0.84
TPM1-213ENST00000558400 PCSK9Q8NBP7 692 aaKnown RBP9.81□□□□□ -0.84
TPM1-213ENST00000558400 LRRC2Q9BYS8 371 aa9.81□□□□□ -0.84
TPM1-213ENST00000558400 SENP6Q9GZR1 1112 aaPredicted RBP9.81□□□□□ -0.84
TPM1-213ENST00000558400 GPHNQ9NQX3 736 aaPredicted RBP9.81□□□□□ -0.84
TPM1-213ENST00000558400 CYP46A1Q9Y6A2 500 aa9.81□□□□□ -0.84
TPM1-213ENST00000558400 MOXD2PA6NHM9 499 aa9.8□□□□□ -0.84
TPM1-213ENST00000558400 GCOM1H8Y6P7 765 aaPredicted RBP9.8□□□□□ -0.84
TPM1-213ENST00000558400 NKRFO15226 690 aaKnown RBP eCLIP9.8□□□□□ -0.84
TPM1-213ENST00000558400 ZEB2O60315 1214 aa9.8□□□□□ -0.84
TPM1-213ENST00000558400 CFBP00751 764 aa9.8□□□□□ -0.84
TPM1-213ENST00000558400 POLR2MP0CAP2 368 aa9.8□□□□□ -0.84
TPM1-213ENST00000558400 RPS6KB1P23443 525 aa9.8□□□□□ -0.84
TPM1-213ENST00000558400 HSD17B4P51659 736 aa9.8□□□□□ -0.84
TPM1-213ENST00000558400 GJA9P57773 515 aa9.8□□□□□ -0.84
TPM1-213ENST00000558400 ANAPC15P60006 121 aa9.8□□□□□ -0.84
TPM1-213ENST00000558400 NKX3-2P78367 333 aa9.8□□□□□ -0.84
TPM1-213ENST00000558400 STXBP2Q15833 593 aa9.8□□□□□ -0.84
TPM1-213ENST00000558400 RTN1Q16799 776 aa9.8□□□□□ -0.84
TPM1-213ENST00000558400 GJC2Q5T442 439 aaPredicted RBP9.8□□□□□ -0.84
TPM1-213ENST00000558400 ARHGEF16Q5VV41 709 aa9.8□□□□□ -0.84
TPM1-213ENST00000558400 ANO1Q5XXA6 986 aa9.8□□□□□ -0.84
TPM1-213ENST00000558400 NOL8Q76FK4 1167 aaKnown RBP9.8□□□□□ -0.84
TPM1-213ENST00000558400 RUFY3Q7L099 469 aa9.8□□□□□ -0.84
TPM1-213ENST00000558400 MICU3Q86XE3 530 aa9.8□□□□□ -0.84
TPM1-213ENST00000558400 PHF6Q8IWS0 365 aaKnown RBP eCLIP9.8□□□□□ -0.84
TPM1-213ENST00000558400 SRBD1Q8N5C6 995 aaKnown RBP9.8□□□□□ -0.84
TPM1-213ENST00000558400 DEFB123Q8N688 67 aa9.8□□□□□ -0.84
TPM1-213ENST00000558400 SYTL5Q8TDW5 730 aaPredicted RBP9.8□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms